-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_16446229-16655754

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_13669-T1
Valid prediction for Augustus_model.g9148.t1
Valid prediction for HiQ_model.g9165.t1
Valid prediction for GeneMark_model.22940_t
Valid prediction for GeneMark_model.22962_t
Valid prediction for snap_scaffold_5-snap.3069-T1
Valid prediction for snap_scaffold_5-snap.3073-T1
Valid prediction for Augustus_model.g9154.t1
Valid prediction for snap_scaffold_5-snap.3097-T1
Valid prediction for GlimmerHMM_glimmerT_13675-T1
Valid prediction for pasa_asmbl_44775.p1
Valid prediction for snap_scaffold_5-snap.3076-T1
Valid prediction for snap_scaffold_5-snap.3079-T1
Valid prediction for GeneMark_model.22949_t
Valid prediction for GlimmerHMM_glimmerT_13695-T1
Valid prediction for snap_scaffold_5-snap.3084-T1
Valid prediction for GlimmerHMM_glimmerT_13698-T1
Couldn't classify 190223, 190996
Sorry, prediction pasa_asmbl_44772.p1 fails validation.
(GCC)	 GG	190223-190996	GG	GAG
Valid prediction for Augustus_model.g9158.t1
Valid prediction for GlimmerHMM_glimmerT_13684-T1
Valid prediction for Augustus_model.g9145.t1
Valid prediction for GlimmerHMM_glimmerT_13670-T1
Valid prediction for snap_scaffold_5-snap.3108-T1
Valid prediction for GeneMark_model.22958_t
Valid prediction for GlimmerHMM_glimmerT_13683-T1
Valid prediction for snap_scaffold_5-snap.3068-T1
Valid prediction for snap_scaffold_5-snap.3101-T1
Valid prediction for GlimmerHMM_glimmerT_13691-T1
Valid prediction for GeneMark_model.22973_t
Valid prediction for GlimmerHMM_glimmerT_13681-T1
Valid prediction for GlimmerHMM_glimmerT_13672-T1
Valid prediction for GeneMark_model.22943_t
Valid prediction for GeneMark_model.22970_t
Valid prediction for GeneMark_model.22950_t
Valid prediction for GeneMark_model.22946_t
Valid prediction for snap_scaffold_5-snap.3099-T1
Valid prediction for HiQ_model.g9149.t1
Valid prediction for GlimmerHMM_glimmerT_13696-T1
Valid prediction for GeneMark_model.22960_t
Valid prediction for Augustus_model.g9161.t1
Valid prediction for GlimmerHMM_glimmerT_13665-T1
Valid prediction for GeneMark_model.22934_t
Valid prediction for snap_scaffold_5-snap.3088-T1
Valid prediction for snap_scaffold_5-snap.3109-T1
Valid prediction for snap_scaffold_5-snap.3085-T1
Valid prediction for snap_scaffold_5-snap.3106-T1
Valid prediction for GeneMark_model.22944_t
Valid prediction for snap_scaffold_5-snap.3094-T1
Valid prediction for snap_scaffold_5-snap.3111-T1
Valid prediction for Augustus_model.g9164.t1
Valid prediction for GlimmerHMM_glimmerT_13674-T1
Valid prediction for GeneMark_model.22932_t
Valid prediction for GlimmerHMM_glimmerT_13676-T1
Valid prediction for GlimmerHMM_glimmerT_13702-T1
Valid prediction for GeneMark_model.22952_t
Valid prediction for GeneMark_model.22976_t
Valid prediction for snap_scaffold_5-snap.3081-T1
Valid prediction for GeneMark_model.22975_t
Valid prediction for pasa_asmbl_44768.p1
Valid prediction for Augustus_model.g9162.t1
Valid prediction for snap_scaffold_5-snap.3074-T1
Valid prediction for GeneMark_model.22938_t
Valid prediction for GlimmerHMM_glimmerT_13690-T1
Valid prediction for GeneMark_model.22964_t
Valid prediction for GeneMark_model.22974_t
Valid prediction for snap_scaffold_5-snap.3104-T1
Valid prediction for snap_scaffold_5-snap.3114-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_5-snap.3086-T1
Valid prediction for snap_scaffold_5-snap.3091-T1
Valid prediction for GeneMark_model.22968_t
Couldn't classify 56201, 56266
Sorry, prediction pasa_asmbl_44766.p2 fails validation.
(ATG)	 CC	55511-55644	GT	TGG
(GGA)	 AG	55801-55945	GT	TGG
(AAT)	 AG	56201-56266	TT	GGT
-recovered pasa_asmbl_44766.p2, initial, 55511, 55644
-recovered pasa_asmbl_44766.p2, internal, 55801, 55945
Valid prediction for GlimmerHMM_glimmerT_13671-T1
Valid prediction for GlimmerHMM_glimmerT_13692-T1
Valid prediction for GeneMark_model.22966_t
Valid prediction for snap_scaffold_5-snap.3078-T1
Valid prediction for Augustus_model.g9152.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_13693-T1
Couldn't classify 28633, 28734
Sorry, prediction pasa_asmbl_46142.p2 fails validation.
(GAG)	 GG	28633-28734	GT	GGG
(CTT)	 AG	31283-31516	TC	AGT
-recovered pasa_asmbl_46142.p2, terminal, 31283, 31516
Valid prediction for GlimmerHMM_glimmerT_13666-T1
Valid prediction for GlimmerHMM_glimmerT_13678-T1
Valid prediction for snap_scaffold_5-snap.3067-T1
Valid prediction for GeneMark_model.22977_t
Valid prediction for snap_scaffold_5-snap.3113-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_13668-T1
Valid prediction for GeneMark_model.22939_t
Valid prediction for snap_scaffold_5-snap.3093-T1
Valid prediction for CodingQuarry_transcript_52290-T1
Valid prediction for GeneMark_model.22933_t
Valid prediction for snap_scaffold_5-snap.3077-T1
Valid prediction for Augustus_model.g9147.t1
Valid prediction for pasa_asmbl_46143.p4
Valid prediction for Augustus_model.g9163.t1
Valid prediction for GeneMark_model.22954_t
Valid prediction for GlimmerHMM_glimmerT_13689-T1
Valid prediction for GlimmerHMM_glimmerT_13664-T1
Valid prediction for snap_scaffold_5-snap.3071-T1
Valid prediction for GlimmerHMM_glimmerT_13685-T1
Valid prediction for GlimmerHMM_glimmerT_13667-T1
Valid prediction for snap_scaffold_5-snap.3095-T1
Valid prediction for GlimmerHMM_glimmerT_13700-T1
Valid prediction for Augustus_model.g9160.t1
Valid prediction for GlimmerHMM_glimmerT_13688-T1
Valid prediction for GlimmerHMM_glimmerT_13673-T1
Couldn't classify 70260, 70532
Sorry, prediction pasa_asmbl_46135.p1 fails validation.
(CCC)	 CC	70260-70532	GT	AGG
(TCT)	 AG	70855-71004	GT	AGG
(AGA)	 AG	72025-72150	AC	GAA
-recovered pasa_asmbl_46135.p1, terminal, 72025, 72150
-recovered pasa_asmbl_46135.p1, internal, 70855, 71004
Valid prediction for GeneMark_model.22965_t
Couldn't classify 134542, 134543
Sorry, prediction pasa_asmbl_46129.p1 fails validation.
(ATG)	 AG	134542-134543	GT	ATG
(GCA)	 AG	135469-135582	GT	TGG
(CTG)	 AG	135681-135750	GT	ATG
(GAA)	 AG	135858-135956	GT	AGG
(TTT)	 AG	136062-136151	GT	ATG
(ATG)	 AG	136257-136310	GT	AGG
(AAA)	 AG	136832-136909	AA	GAA
-recovered pasa_asmbl_46129.p1, initial, 136257, 136310
-recovered pasa_asmbl_46129.p1, terminal, 136832, 136909
-recovered pasa_asmbl_46129.p1, internal, 134542, 134543
-recovered pasa_asmbl_46129.p1, internal, 135469, 135582
-recovered pasa_asmbl_46129.p1, internal, 135681, 135750
-recovered pasa_asmbl_46129.p1, internal, 135858, 135956
-recovered pasa_asmbl_46129.p1, internal, 136062, 136151
-recovered pasa_asmbl_46129.p1, internal, 136257, 136310
Valid prediction for snap_scaffold_5-snap.3082-T1
Valid prediction for snap_scaffold_5-snap.3098-T1
Valid prediction for snap_scaffold_5-snap.3103-T1
Valid prediction for snap_scaffold_5-snap.3083-T1
Valid prediction for Augustus_model.g9146.t1
Valid prediction for GeneMark_model.22945_t
Valid prediction for Augustus_model.g9151.t1
Valid prediction for GeneMark_model.22947_t
Valid prediction for snap_scaffold_5-snap.3087-T1
Valid prediction for GeneMark_model.22935_t
Valid prediction for GeneMark_model.22963_t
Valid prediction for GlimmerHMM_glimmerT_13679-T1
Valid prediction for GeneMark_model.22953_t
Valid prediction for GlimmerHMM_glimmerT_13687-T1
Valid prediction for snap_scaffold_5-snap.3110-T1
Valid prediction for Augustus_model.g9156.t1
Valid prediction for GlimmerHMM_glimmerT_13677-T1
Valid prediction for Augustus_model.g9153.t1
Valid prediction for GeneMark_model.22972_t
Valid prediction for GeneMark_model.22955_t
Valid prediction for Augustus_model.g9157.t1
Valid prediction for GeneMark_model.22971_t
Valid prediction for Augustus_model.g9150.t1
Valid prediction for snap_scaffold_5-snap.3102-T1
Valid prediction for Augustus_model.g9144.t1
Valid prediction for snap_scaffold_5-snap.3070-T1
Valid prediction for GeneMark_model.22941_t
Valid prediction for GeneMark_model.22951_t
Valid prediction for snap_scaffold_5-snap.3096-T1
Valid prediction for snap_scaffold_5-snap.3107-T1
Valid prediction for snap_scaffold_5-snap.3112-T1
Valid prediction for HiQ_model.g9155.t1
Couldn't classify 59646, 59906
Couldn't classify 60666, 60767
Sorry, prediction pasa_asmbl_46139.p1 fails validation.
(CCC)	 CC	59646-59906	GT	TGG
(GAG)	 AG	60666-60767	AC	CAA
Valid prediction for snap_scaffold_5-snap.3090-T1
Valid prediction for GeneMark_model.22937_t
Valid prediction for GeneMark_model.22948_t
Valid prediction for snap_scaffold_5-snap.3080-T1
Valid prediction for GeneMark_model.22956_t
Valid prediction for GlimmerHMM_glimmerT_13682-T1
Valid prediction for GeneMark_model.22961_t
Valid prediction for snap_scaffold_5-snap.3105-T1
Valid prediction for GlimmerHMM_glimmerT_13697-T1
Valid prediction for snap_scaffold_5-snap.3092-T1
Valid prediction for snap_scaffold_5-snap.3089-T1
Valid prediction for GeneMark_model.22969_t
Couldn't classify 134542, 134543
Sorry, prediction CodingQuarry_transcript_52289-T1 fails validation.
(ATG)	 AG	134542-134543	GT	ATG
(GCA)	 AG	135469-135582	GT	TGG
(CTG)	 AG	135681-135750	GT	ATG
(GAA)	 AG	135858-135956	GT	AGG
(TTT)	 AG	136062-136151	GT	ATG
(ATG)	 AG	136257-136310	GT	AGG
(CAT)	 AG	136535-136562	GT	AAG
(AAA)	 AG	136832-136851	CA	AGC
-recovered CodingQuarry_transcript_52289-T1, initial, 136257, 136310
-recovered CodingQuarry_transcript_52289-T1, terminal, 136832, 136851
-recovered CodingQuarry_transcript_52289-T1, internal, 134542, 134543
-recovered CodingQuarry_transcript_52289-T1, internal, 135469, 135582
-recovered CodingQuarry_transcript_52289-T1, internal, 135681, 135750
-recovered CodingQuarry_transcript_52289-T1, internal, 135858, 135956
-recovered CodingQuarry_transcript_52289-T1, internal, 136062, 136151
-recovered CodingQuarry_transcript_52289-T1, internal, 136257, 136310
-recovered CodingQuarry_transcript_52289-T1, internal, 136535, 136562
Valid prediction for GlimmerHMM_glimmerT_13694-T1
Valid prediction for GlimmerHMM_glimmerT_13680-T1
Valid prediction for GlimmerHMM_glimmerT_13686-T1
Valid prediction for GlimmerHMM_glimmerT_13701-T1
Couldn't classify 40562, 40879
Sorry, prediction pasa_asmbl_46140.p1 fails validation.
(CCC)	 CT	40562-40879	CG	AGC
Valid prediction for snap_scaffold_5-snap.3100-T1
Valid prediction for GeneMark_model.22959_t
Couldn't classify 95687, 95798
Sorry, prediction pasa_asmbl_46132.p1 fails validation.
(GGT)	 CA	95687-95798	GT	GGG
(GCA)	 AG	95956-96113	GT	TGG
(CTC)	 AG	96356-96520	GT	AGG
(ACA)	 AG	96860-97012	GT	CGG
(GTC)	 AG	97162-97244	GT	GGG
(TTT)	 AG	97385-97532	GT	AGG
(GAG)	 AG	97825-97938	GT	AGG
(CTC)	 AG	98101-98178	GT	AGG
(GCA)	 AG	98279-98374	GT	TTG
(GTC)	 AG	98508-98614	GT	AGG
(GGC)	 AG	98777-98846	GT	AGG
(TGC)	 AG	99115-99294	GT	TGG
(GAG)	 AG	99601-99655	GT	TGG
(AAA)	 AG	99765-99853	GT	AGG
(ATG)	 AG	99960-100014	GT	CGG
(AGA)	 AG	100225-100331	GT	AGG
(GAG)	 AG	100442-100480	GA	GAG
-recovered pasa_asmbl_46132.p1, initial, 99960, 100014
-recovered pasa_asmbl_46132.p1, terminal, 100442, 100480
-recovered pasa_asmbl_46132.p1, internal, 95956, 96113
-recovered pasa_asmbl_46132.p1, internal, 96356, 96520
-recovered pasa_asmbl_46132.p1, internal, 96860, 97012
-recovered pasa_asmbl_46132.p1, internal, 97162, 97244
-recovered pasa_asmbl_46132.p1, internal, 97385, 97532
-recovered pasa_asmbl_46132.p1, internal, 97825, 97938
-recovered pasa_asmbl_46132.p1, internal, 98101, 98178
-recovered pasa_asmbl_46132.p1, internal, 98279, 98374
-recovered pasa_asmbl_46132.p1, internal, 98508, 98614
-recovered pasa_asmbl_46132.p1, internal, 98777, 98846
-recovered pasa_asmbl_46132.p1, internal, 99115, 99294
-recovered pasa_asmbl_46132.p1, internal, 99601, 99655
-recovered pasa_asmbl_46132.p1, internal, 99765, 99853
-recovered pasa_asmbl_46132.p1, internal, 99960, 100014
-recovered pasa_asmbl_46132.p1, internal, 100225, 100331
Valid prediction for HiQ_model.g9159.t1
Valid prediction for GeneMark_model.22957_t
Valid prediction for snap_scaffold_5-snap.3072-T1
Valid prediction for GeneMark_model.22936_t
Valid prediction for GlimmerHMM_glimmerT_13699-T1
Valid prediction for snap_scaffold_5-snap.3075-T1
Valid prediction for GeneMark_model.22967_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 6074, rend_intergenic: 5138  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16692, rend_intergenic: 13135  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23594, rend_intergenic: 21299  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26712, rend_intergenic: 25784  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34502, rend_intergenic: 32697  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38227, rend_intergenic: 35361  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46949, rend_intergenic: 43806  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122638, rend_intergenic: 116766  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142192, rend_intergenic: 140101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143917, rend_intergenic: 143645  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146200, rend_intergenic: 143958  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154564, rend_intergenic: 150184  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162951, rend_intergenic: 161126  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180888, rend_intergenic: 166791  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183960, rend_intergenic: 181139  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186669, rend_intergenic: 185854  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205306, rend_intergenic: 197994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 209526
-exon list size: 712


building trellis

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49.2    
49.3    
49.4    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.6    
50.7    
50.8    
51.0    
51.1    
51.3    
51.4    
51.5    
51.7    
51.8    
52.0    
52.1    
52.2    
52.4    
52.5    
52.7    
52.8    
52.9    
53.1    
53.2    
53.4    
53.5    
53.6    
53.8    
53.9    
54.1    
54.2    
54.3    
54.5    
54.6    
54.8    
54.9    
55.0    
55.2    
55.3    
55.5    
55.6    
55.7    
55.9    
56.0    
56.2    
56.3    
56.4    
56.6    
56.7    
56.9    
57.0    
57.1    
57.3    
57.4    
57.6    
57.7    
57.8    
58.0    
58.1    
58.3    
58.4    
58.5    
58.7    
58.8    
59.0    
59.1    
59.2    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.4    
60.5    
60.6    
60.8    
60.9    
61.1    
61.2    
61.3    
61.5    
61.6    
61.8    
61.9    
62.0    
62.2    
62.3    
62.5    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.4    
63.6    
63.7    
63.9    
64.0    
64.1    
64.3    
64.4    
64.6    
64.7    
64.8    
65.0    
65.1    
65.3    
65.4    
65.5    
65.7    
65.8    
66.0    
66.1    
66.2    
66.4    
66.5    
66.7    
66.8    
66.9    
67.1    
67.2    
67.4    
67.5    
67.6    
67.8    
67.9    
68.1    
68.2    
68.3    
68.5    
68.6    
68.8    
68.9    
69.0    
69.2    
69.3    
69.5    
69.6    
69.7    
69.9    
70.0    
70.2    
70.3    
70.4    
70.6    
70.7    
70.9    
71.0    
71.1    
71.3    
71.4    
71.6    
71.7    
71.8    
72.0    
72.1    
72.3    
72.4    
72.5    
72.7    
72.8    
73.0    
73.1    
73.2    
73.4    
73.5    
73.7    
73.8    
73.9    
74.1    
74.2    
74.4    
74.5    
74.6    
74.8    
74.9    
75.1    
75.2    
75.4    
75.5    
75.6    
75.8    
75.9    
76.1    
76.2    
76.3    
76.5    
76.6    
76.8    
76.9    
77.0    
77.2    
77.3    
77.5    
77.6    
77.7    
77.9    
78.0    
78.2    
78.3    
78.4    
78.6    
78.7    
78.9    
79.0    
79.1    
79.3    
79.4    
79.6    
79.7    
79.8    
80.0    
80.1    
80.3    
80.4    
80.5    
80.7    
80.8    
81.0    
81.1    
81.2    
81.4    
81.5    
81.7    
81.8    
81.9    
82.1    
82.2    
82.4    
82.5    
82.6    
82.8    
82.9    
83.1    
83.2    
83.3    
83.5    
83.6    
83.8    
83.9    
84.0    
84.2    
84.3    
84.5    
84.6    
84.7    
84.9    
85.0    
85.2    
85.3    
85.4    
85.6    
85.7    
85.9    
86.0    
86.1    
86.3    
86.4    
86.6    
86.7    
86.8    
87.0    
87.1    
87.3    
87.4    
87.5    
87.7    
87.8    
88.0    
88.1    
88.2    
88.4    
88.5    
88.7    
88.8    
88.9    
89.1    
89.2    
89.4    
89.5    
89.6    
89.8    
89.9    
90.1    
90.2    
90.3    
90.5    
90.6    
90.8    
90.9    
91.0    
91.2    
91.3    
91.5    
91.6    
91.7    
91.9    
92.0    
92.2    
92.3    
92.4    
92.6    
92.7    
92.9    
93.0    
93.1    
93.3    
93.4    
93.6    
93.7    
93.8    
94.0    
94.1    
94.3    
94.4    
94.5    
94.7    
94.8    
95.0    
95.1    
95.2    
95.4    
95.5    
95.7    
95.8    
95.9    
96.1    
96.2    
96.4    
96.5    
96.6    
96.8    
96.9    
97.1    
97.2    
97.3    
97.5    
97.6    
97.8    
97.9    
98.0    
98.2    
98.3    
98.5    
98.6    
98.7    
98.9    
99.0    
99.2    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 37 predictions from path traversal
Error with prediction: snap lend_intergenic: 6074, rend_intergenic: 5138  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16692, rend_intergenic: 13135  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 23594, rend_intergenic: 21299  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 26712, rend_intergenic: 25784  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34502, rend_intergenic: 32697  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38227, rend_intergenic: 35361  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46949, rend_intergenic: 43806  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 122638, rend_intergenic: 116766  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 142192, rend_intergenic: 140101  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143917, rend_intergenic: 143645  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146200, rend_intergenic: 143958  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154564, rend_intergenic: 150184  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 162951, rend_intergenic: 161126  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 180888, rend_intergenic: 166791  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 183960, rend_intergenic: 181139  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186669, rend_intergenic: 185854  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 205306, rend_intergenic: 197994  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 21 predictions persist after filtering for low support