-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_15444087-15685997 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.22730_t Valid prediction for snap_scaffold_5-snap.2858-T1 Valid prediction for GeneMark_model.22709_t Valid prediction for snap_scaffold_5-snap.2871-T1 Valid prediction for snap_scaffold_5-snap.2867-T1 Couldn't classify 56556, 56700 Sorry, prediction pasa_asmbl_44663.p1 fails validation. (GGT) CA 56556-56700 GT AGG (GTC) AG 56883-57713 GT GGG (GCC) AG 57899-58221 GG AGG -recovered pasa_asmbl_44663.p1, terminal, 57899, 58221 -recovered pasa_asmbl_44663.p1, internal, 56883, 57713 Valid prediction for GeneMark_model.22699_t Valid prediction for GlimmerHMM_glimmerT_13546-T1 Valid prediction for GeneMark_model.22711_t Valid prediction for HiQ_model.g9061.t1 Valid prediction for GlimmerHMM_glimmerT_13528-T1 Valid prediction for snap_scaffold_5-snap.2862-T1 Valid prediction for GeneMark_model.22732_t Valid prediction for GlimmerHMM_glimmerT_13544-T1 Valid prediction for HiQ_model.g9041.t1 Valid prediction for Augustus_model.g9053.t1 Valid prediction for CodingQuarry_transcript_52254-T1 Valid prediction for snap_scaffold_5-snap.2869-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_13508-T1 Valid prediction for snap_scaffold_5-snap.2898-T1 Valid prediction for snap_scaffold_5-snap.2889-T1 Valid prediction for GlimmerHMM_glimmerT_13506-T1 Valid prediction for GeneMark_model.22704_t Valid prediction for GeneMark_model.22685_t Valid prediction for GeneMark_model.22733_t Valid prediction for Augustus_model.g9042.t1 Couldn't classify 192068, 192421 Sorry, prediction pasa_asmbl_44665.p1 fails validation. (ATG) GT 191345-191606 GT AGG (ATG) AG 191781-191980 GT TGG (TTG) AG 192068-192421 AT GCA -recovered pasa_asmbl_44665.p1, initial, 191345, 191606 add_exon() Sorry, pasa_asmbl_44665.p1 191781-191980-initial-1 is invalid. -recovered pasa_asmbl_44665.p1, initial, 191781, 191980 -recovered pasa_asmbl_44665.p1, internal, 191781, 191980 Valid prediction for snap_scaffold_5-snap.2894-T1 Valid prediction for Augustus_model.g9058.t1 Valid prediction for GlimmerHMM_glimmerT_13521-T1 Couldn't classify 32644, 32805 Couldn't classify 33387, 33477 Sorry, prediction pasa_asmbl_44985.p1 fails validation. (GGG) TA 32644-32805 GT AGG (GCT) AG 32949-33175 GT AGG (GTT) AG 33387-33477 GT CTG -recovered pasa_asmbl_44985.p1, internal, 32949, 33175 -recovered pasa_asmbl_44985.p1, internal, 33387, 33477 Valid prediction for snap_scaffold_5-snap.2855-T1 Valid prediction for snap_scaffold_5-snap.2888-T1 Valid prediction for GeneMark_model.22739_t Valid prediction for GlimmerHMM_glimmerT_13536-T1 Valid prediction for GeneMark_model.22736_t Valid prediction for GeneMark_model.22738_t Valid prediction for GeneMark_model.22719_t Valid prediction for Augustus_model.g9043.t1 Valid prediction for pasa_asmbl_44658.p1 Valid prediction for GlimmerHMM_glimmerT_13537-T1 Valid prediction for GeneMark_model.22686_t Valid prediction for Augustus_model.g9040.t1 Valid prediction for GlimmerHMM_glimmerT_13509-T1 Couldn't classify 231881, 232020 Couldn't classify 232197, 232294 Sorry, prediction CodingQuarry_transcript_52267-T1 fails validation. (ATG) TA 230263-230292 GT AGG (CCG) AG 230736-230942 GT AGG (GGC) AG 231533-231639 GT AGG (GTT) AG 231881-232020 AT TGA (ATA) AC 232197-232294 GT TGG (TTG) AG 233203-233296 GT AGG (CCA) AG 234229-234320 GT AGG (GCG) AG 234414-234486 GT CAG (GCA) AG 234561-234619 GT CTG (GTG) AG 234902-235050 GT AGG (GGA) AG 236061-236242 GT AGG (AGC) AG 236848-236945 GT AGG (GTT) AG 237200-237280 GT ACG (GAC) AG 239009-239146 GT AGG (CTG) AG 239287-239359 GT AGG (AGT) AG 239888-239976 TC AAT -recovered CodingQuarry_transcript_52267-T1, initial, 230263, 230292 -recovered CodingQuarry_transcript_52267-T1, terminal, 233203, 233296 -recovered CodingQuarry_transcript_52267-T1, terminal, 239888, 239976 -recovered CodingQuarry_transcript_52267-T1, internal, 230736, 230942 -recovered CodingQuarry_transcript_52267-T1, internal, 231533, 231639 -recovered CodingQuarry_transcript_52267-T1, internal, 233203, 233296 -recovered CodingQuarry_transcript_52267-T1, internal, 234229, 234320 -recovered CodingQuarry_transcript_52267-T1, internal, 234414, 234486 -recovered CodingQuarry_transcript_52267-T1, internal, 234561, 234619 -recovered CodingQuarry_transcript_52267-T1, internal, 234902, 235050 -recovered CodingQuarry_transcript_52267-T1, internal, 236061, 236242 -recovered CodingQuarry_transcript_52267-T1, internal, 236848, 236945 -recovered CodingQuarry_transcript_52267-T1, internal, 237200, 237280 -recovered CodingQuarry_transcript_52267-T1, internal, 239009, 239146 -recovered CodingQuarry_transcript_52267-T1, internal, 239287, 239359 Valid prediction for GeneMark_model.22707_t Valid prediction for snap_scaffold_5-snap.2876-T1 Valid prediction for snap_scaffold_5-snap.2850-T1 Valid prediction for GeneMark_model.22715_t Valid prediction for snap_scaffold_5-snap.2883-T1 Valid prediction for GeneMark_model.22691_t Valid prediction for Augustus_model.g9044.t1 Valid prediction for pasa_asmbl_44671.p1 Valid prediction for GeneMark_model.22713_t Valid prediction for GeneMark_model.22701_t Valid prediction for snap_scaffold_5-snap.2892-T1 Valid prediction for snap_scaffold_5-snap.2890-T1 Valid prediction for snap_scaffold_5-snap.2895-T1 Valid prediction for snap_scaffold_5-snap.2872-T1 Valid prediction for GeneMark_model.22743_t Valid prediction for GeneMark_model.22693_t Valid prediction for Augustus_model.g9036.t1 Valid prediction for GeneMark_model.22696_t Valid prediction for snap_scaffold_5-snap.2875-T1 Valid prediction for GeneMark_model.22725_t Valid prediction for GeneMark_model.22741_t Valid prediction for snap_scaffold_5-snap.2854-T1 Valid prediction for GlimmerHMM_glimmerT_13543-T1 Valid prediction for GeneMark_model.22721_t Valid prediction for CodingQuarry_transcript_52253-T1 Valid prediction for snap_scaffold_5-snap.2880-T1 Valid prediction for GeneMark_model.22722_t Valid prediction for snap_scaffold_5-snap.2873-T1 Valid prediction for GeneMark_model.22694_t Valid prediction for snap_scaffold_5-snap.2881-T1 Valid prediction for GlimmerHMM_glimmerT_13527-T1 Valid prediction for GeneMark_model.22727_t Valid prediction for pasa_asmbl_44661.p1 Valid prediction for GlimmerHMM_glimmerT_13525-T1 Valid prediction for GlimmerHMM_glimmerT_13523-T1 Valid prediction for GeneMark_model.22690_t Valid prediction for Augustus_model.g9038.t1 Valid prediction for snap_scaffold_5-snap.2853-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for Augustus_model.g9037.t1 Valid prediction for snap_scaffold_5-snap.2859-T1 Valid prediction for GeneMark_model.22723_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_13535-T1 Valid prediction for Augustus_model.g9035.t1 Valid prediction for GeneMark_model.22717_t Valid prediction for Augustus_model.g9050.t1 Valid prediction for snap_scaffold_5-snap.2860-T1 Valid prediction for GeneMark_model.22714_t Valid prediction for snap_scaffold_5-snap.2870-T1 Valid prediction for GlimmerHMM_glimmerT_13510-T1 Valid prediction for GeneMark_model.22737_t Valid prediction for snap_scaffold_5-snap.2874-T1 Valid prediction for Augustus_model.g9060.t1 Valid prediction for snap_scaffold_5-snap.2866-T1 Valid prediction for CodingQuarry_transcript_52252-T1 Valid prediction for GlimmerHMM_glimmerT_13511-T1 Valid prediction for snap_scaffold_5-snap.2865-T1 Valid prediction for HiQ_model.g9048.t1 Valid prediction for Augustus_model.g9054.t1 Valid prediction for GlimmerHMM_glimmerT_13526-T1 Valid prediction for GlimmerHMM_glimmerT_13512-T1 Valid prediction for CodingQuarry_transcript_52251-T1 Valid prediction for GlimmerHMM_glimmerT_13532-T1 Valid prediction for GeneMark_model.22705_t Valid prediction for snap_scaffold_5-snap.2857-T1 Valid prediction for GeneMark_model.22728_t Valid prediction for snap_scaffold_5-snap.2891-T1 Valid prediction for GeneMark_model.22734_t Couldn't classify 45903, 46061 Couldn't classify 46687, 46797 Sorry, prediction pasa_asmbl_46377.p1 fails validation. (CTG) GT 45903-46061 GT AGG (AGT) AG 46255-46416 GT AGG (ATG) AG 46687-46797 CC AAC -recovered pasa_asmbl_46377.p1, internal, 46255, 46416 Valid prediction for GlimmerHMM_glimmerT_13518-T1 Couldn't classify 135550, 135939 Sorry, prediction pasa_asmbl_46081.p2 fails validation. (ATG) CC 135550-135939 AG CCA Valid prediction for GeneMark_model.22742_t Couldn't classify 38788, 38970 Couldn't classify 39428, 39472 Sorry, prediction pasa_asmbl_46419.p1 fails validation. (CTG) AT 38788-38970 GC AGG (GTG) AG 39091-39216 GT GGG (GTG) AG 39428-39472 AA AGA -recovered pasa_asmbl_46419.p1, internal, 39091, 39216 Valid prediction for CodingQuarry_transcript_52265-T1 Valid prediction for HiQ_model.g9046.t1 Valid prediction for GeneMark_model.22688_t Valid prediction for GlimmerHMM_glimmerT_13531-T1 Valid prediction for GlimmerHMM_glimmerT_13522-T1 Valid prediction for GeneMark_model.22718_t Valid prediction for GeneMark_model.22729_t Valid prediction for pasa_asmbl_46086.p1 Valid prediction for snap_scaffold_5-snap.2897-T1 Valid prediction for CodingQuarry_transcript_52259-T1 Valid prediction for GlimmerHMM_glimmerT_13539-T1 Couldn't classify 131896, 132393 Sorry, prediction pasa_asmbl_46083.p1 fails validation. (AGC) TC 131896-132393 AG CCA Valid prediction for GlimmerHMM_glimmerT_13519-T1 Valid prediction for GeneMark_model.22692_t Couldn't classify 136833, 136973 Sorry, prediction pasa_asmbl_46079.p1 fails validation. (CAC) TA 136833-136973 GT TGG (GCA) AG 137187-137805 GT GAG (TCA) AG 138916-139014 GT GGG (GAC) AG 139124-139197 GT AGG (GGC) AG 139308-139507 GT AGG (GGT) AG 139622-139713 GT TGG (CGT) AG 139805-139974 GT AGG (GTG) AG 140059-140253 CC GAC add_exon() Sorry, pasa_asmbl_46079.p1 137187-137805-terminal-3 is invalid. -recovered pasa_asmbl_46079.p1, terminal, 137187, 137805 -recovered pasa_asmbl_46079.p1, terminal, 140059, 140253 -recovered pasa_asmbl_46079.p1, internal, 137187, 137805 -recovered pasa_asmbl_46079.p1, internal, 138916, 139014 -recovered pasa_asmbl_46079.p1, internal, 139124, 139197 -recovered pasa_asmbl_46079.p1, internal, 139308, 139507 -recovered pasa_asmbl_46079.p1, internal, 139622, 139713 -recovered pasa_asmbl_46079.p1, internal, 139805, 139974 Valid prediction for CodingQuarry_transcript_52258-T1 Valid prediction for CodingQuarry_transcript_52256-T1 Valid prediction for pasa_asmbl_46069.p1 Valid prediction for Augustus_model.g9039.t1 Valid prediction for GlimmerHMM_glimmerT_13533-T1 Valid prediction for GeneMark_model.22740_t Valid prediction for snap_scaffold_5-snap.2852-T1 Valid prediction for snap_scaffold_5-snap.2884-T1 Valid prediction for GeneMark_model.22731_t Valid prediction for GlimmerHMM_glimmerT_13540-T1 Valid prediction for GeneMark_model.22706_t Valid prediction for snap_scaffold_5-snap.2849-T1 Valid prediction for pasa_asmbl_46088.p1 Valid prediction for GeneMark_model.22695_t Valid prediction for HiQ_model.g9049.t1 Valid prediction for snap_scaffold_5-snap.2882-T1 Couldn't classify 143036, 143206 Couldn't classify 146294, 146436 Sorry, prediction pasa_asmbl_46075.p1 fails validation. (TAC) GG 143036-143206 GT CGG (ATG) AG 143455-143539 GT TGG (ATA) AG 143737-143813 GT AGG (ACT) AG 143937-144144 GT AGG (GGT) AG 144234-144329 GT AGG (ACA) AG 144417-144533 GT AGG (ACA) AG 144630-144689 GT CTG (TGT) AG 144773-145078 GT AGG (GTT) AG 145215-145295 GT AGG (AAA) AG 145405-145515 GT TGG (AGG) AG 145853-146013 GT AGG (TGT) AG 146102-146201 GT AGG (GTG) AG 146294-146436 CA TGC -recovered pasa_asmbl_46075.p1, initial, 143455, 143539 -recovered pasa_asmbl_46075.p1, internal, 143455, 143539 -recovered pasa_asmbl_46075.p1, internal, 143737, 143813 -recovered pasa_asmbl_46075.p1, internal, 143937, 144144 -recovered pasa_asmbl_46075.p1, internal, 144234, 144329 -recovered pasa_asmbl_46075.p1, internal, 144417, 144533 -recovered pasa_asmbl_46075.p1, internal, 144630, 144689 -recovered pasa_asmbl_46075.p1, internal, 144773, 145078 -recovered pasa_asmbl_46075.p1, internal, 145215, 145295 -recovered pasa_asmbl_46075.p1, internal, 145405, 145515 -recovered pasa_asmbl_46075.p1, internal, 145853, 146013 -recovered pasa_asmbl_46075.p1, internal, 146102, 146201 Valid prediction for GlimmerHMM_glimmerT_13529-T1 Valid prediction for HiQ_model.g9056.t1 Couldn't classify 151014, 151034 Sorry, prediction pasa_asmbl_46073.p1 fails validation. (AAA) TC 151014-151034 GT AGG (GGT) AG 151169-151201 GT AGG (GAG) AG 153288-153393 GT CCG (ACA) AG 153591-153711 GT GGG (GTA) AG 153800-153862 GT AAG (GGT) AG 153953-154013 GT CAG (CTG) AG 154224-154310 GT AGG (CTG) AG 154582-154638 GT ATG (GAG) AG 154785-154888 GT AGG (CCG) AG 155000-155065 GT AGG (GTG) AG 155154-155205 GT TGG (GTG) AG 155317-155364 GT AGG (ATG) AG 155446-155481 GT AGG (CCT) AG 155575-155626 GT CAG (TGC) AG 156561-156748 AT AGA -recovered pasa_asmbl_46073.p1, initial, 155446, 155481 -recovered pasa_asmbl_46073.p1, terminal, 156561, 156748 -recovered pasa_asmbl_46073.p1, internal, 151169, 151201 -recovered pasa_asmbl_46073.p1, internal, 153288, 153393 -recovered pasa_asmbl_46073.p1, internal, 153591, 153711 -recovered pasa_asmbl_46073.p1, internal, 153800, 153862 -recovered pasa_asmbl_46073.p1, internal, 153953, 154013 -recovered pasa_asmbl_46073.p1, internal, 154224, 154310 -recovered pasa_asmbl_46073.p1, internal, 154582, 154638 -recovered pasa_asmbl_46073.p1, internal, 154785, 154888 -recovered pasa_asmbl_46073.p1, internal, 155000, 155065 -recovered pasa_asmbl_46073.p1, internal, 155154, 155205 -recovered pasa_asmbl_46073.p1, internal, 155317, 155364 -recovered pasa_asmbl_46073.p1, internal, 155446, 155481 -recovered pasa_asmbl_46073.p1, internal, 155575, 155626 Valid prediction for Augustus_model.g9052.t1 Couldn't classify 234462, 234557 Sorry, prediction pasa_asmbl_46054.p1 fails validation. (GTC) AG 234462-234557 GT CGG (TTG) AG 234769-234840 GT AGG (GTG) AG 234953-235039 GT AGG (CTC) AG 235383-235529 GT AGG (ATC) AG 235819-235961 GT GCG (GGG) AG 236276-236371 GT AGG (GGG) AG 236621-236752 GT AGG (ATT) AG 236954-237059 GT AGG (GTG) AG 237141-237190 GT TGG (GTA) AG 237345-237372 AA AGA -recovered pasa_asmbl_46054.p1, terminal, 237345, 237372 -recovered pasa_asmbl_46054.p1, internal, 234462, 234557 -recovered pasa_asmbl_46054.p1, internal, 234769, 234840 -recovered pasa_asmbl_46054.p1, internal, 234953, 235039 -recovered pasa_asmbl_46054.p1, internal, 235383, 235529 -recovered pasa_asmbl_46054.p1, internal, 235819, 235961 -recovered pasa_asmbl_46054.p1, internal, 236276, 236371 -recovered pasa_asmbl_46054.p1, internal, 236621, 236752 -recovered pasa_asmbl_46054.p1, internal, 236954, 237059 -recovered pasa_asmbl_46054.p1, internal, 237141, 237190 Valid prediction for HiQ_model.g9047.t1 Valid prediction for CodingQuarry_transcript_52261-T1 Valid prediction for snap_scaffold_5-snap.2886-T1 Valid prediction for snap_scaffold_5-snap.2893-T1 Valid prediction for GeneMark_model.22708_t Valid prediction for GeneMark_model.22735_t Valid prediction for GlimmerHMM_glimmerT_13515-T1 Valid prediction for GeneMark_model.22702_t Valid prediction for snap_scaffold_5-snap.2896-T1 Valid prediction for GeneMark_model.22703_t Valid prediction for CodingQuarry_transcript_52266-T1 Couldn't classify 232869, 232877 Couldn't classify 234462, 234491 Sorry, prediction pasa_asmbl_46056.p1 fails validation. (ATA) CC 232869-232877 GT GGG (GTG) AG 233024-233209 GT AGG (GGA) AG 233312-233488 GT AGG (GTG) AG 233839-233921 GT AGG (GTT) AG 234035-234083 GT AGG (TGG) AG 234170-234259 GT AGG (GTC) AG 234462-234491 CA ACC -recovered pasa_asmbl_46056.p1, internal, 233024, 233209 -recovered pasa_asmbl_46056.p1, internal, 233312, 233488 -recovered pasa_asmbl_46056.p1, internal, 233839, 233921 -recovered pasa_asmbl_46056.p1, internal, 234035, 234083 -recovered pasa_asmbl_46056.p1, internal, 234170, 234259 Valid prediction for Augustus_model.g9059.t1 Valid prediction for GlimmerHMM_glimmerT_13517-T1 Valid prediction for GeneMark_model.22697_t Valid prediction for GlimmerHMM_glimmerT_13505-T1 Valid prediction for pasa_asmbl_46084.p3 Valid prediction for CodingQuarry_transcript_52260-T1 Valid prediction for Augustus_model.g9045.t1 Valid prediction for snap_scaffold_5-snap.2878-T1 Valid prediction for GeneMark_model.22716_t Valid prediction for GlimmerHMM_glimmerT_13507-T1 Valid prediction for HiQ_model.g9055.t1 Valid prediction for GeneMark_model.22698_t Valid prediction for pasa_asmbl_46071.p1 Valid prediction for GlimmerHMM_glimmerT_13524-T1 Valid prediction for GeneMark_model.22712_t Valid prediction for snap_scaffold_5-snap.2851-T1 Valid prediction for GlimmerHMM_glimmerT_13538-T1 Valid prediction for GeneMark_model.22684_t Valid prediction for Augustus_model.g9051.t1 Valid prediction for snap_scaffold_5-snap.2856-T1 Valid prediction for snap_scaffold_5-snap.2879-T1 Valid prediction for GeneMark_model.22710_t Valid prediction for snap_scaffold_5-snap.2877-T1 Valid prediction for Augustus_model.g9057.t1 Valid prediction for CodingQuarry_transcript_52264-T1 Valid prediction for pasa_asmbl_46067.p1 Valid prediction for GeneMark_model.22700_t Valid prediction for GlimmerHMM_glimmerT_13514-T1 Valid prediction for GlimmerHMM_glimmerT_13530-T1 Valid prediction for GlimmerHMM_glimmerT_13541-T1 Couldn't classify 146713, 146925 Sorry, prediction pasa_asmbl_46406.p1 fails validation. (AAG) AC 146713-146925 GT AGG (GCA) AG 147105-147372 GT TGG (TGT) AG 147565-147719 GC GAG -recovered pasa_asmbl_46406.p1, terminal, 147565, 147719 -recovered pasa_asmbl_46406.p1, internal, 147105, 147372 -recovered pasa_asmbl_46406.p1, internal, 147565, 147719 Valid prediction for snap_scaffold_5-snap.2861-T1 Valid prediction for snap_scaffold_5-snap.2868-T1 Valid prediction for GeneMark_model.22720_t Valid prediction for GlimmerHMM_glimmerT_13513-T1 Valid prediction for GeneMark_model.22726_t Valid prediction for snap_scaffold_5-snap.2864-T1 Valid prediction for GlimmerHMM_glimmerT_13542-T1 Valid prediction for snap_scaffold_5-snap.2885-T1 Couldn't classify 177752, 177997 Sorry, prediction pasa_asmbl_46063.p1 fails validation. (CGA) TG 177752-177997 GT GGG (GTG) AG 179713-179859 GT AGG (GTC) AG 179986-180271 GT GGG (GTG) AG 180442-180657 GT CAG (GTG) AG 180743-180927 CG GAC -recovered pasa_asmbl_46063.p1, terminal, 180743, 180927 -recovered pasa_asmbl_46063.p1, internal, 179713, 179859 -recovered pasa_asmbl_46063.p1, internal, 179986, 180271 -recovered pasa_asmbl_46063.p1, internal, 180442, 180657 Valid prediction for GlimmerHMM_glimmerT_13534-T1 Valid prediction for GlimmerHMM_glimmerT_13520-T1 Valid prediction for pasa_asmbl_46092.p1 Valid prediction for snap_scaffold_5-snap.2863-T1 Valid prediction for GeneMark_model.22724_t Valid prediction for GlimmerHMM_glimmerT_13545-T1 Valid prediction for snap_scaffold_5-snap.2887-T1 Valid prediction for GlimmerHMM_glimmerT_13516-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 11220, rend_intergenic: 5942 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 12241, rend_intergenic: 11472 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 59205, rend_intergenic: 51975 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64067, rend_intergenic: 62066 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90934, rend_intergenic: 85098 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99364, rend_intergenic: 94227 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 112490, rend_intergenic: 101666 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130555, rend_intergenic: 119162 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143973, rend_intergenic: 130612 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167391, rend_intergenic: 144538 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168591, rend_intergenic: 167455 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215815, rend_intergenic: 192510 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 220040, rend_intergenic: 218377 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222870, rend_intergenic: 222225 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228798, rend_intergenic: 223453 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 235321, rend_intergenic: 230717 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 238649, rend_intergenic: 236071 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 241911 -exon list size: 1137 building trellis 0.1 0.2 0.3 0.4 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.1 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.8 1.9 2.0 2.1 2.2 2.3 2.4 2.5 2.5 2.6 2.7 2.8 2.9 3.0 3.1 3.2 3.2 3.3 3.4 3.5 3.6 3.7 3.8 3.9 4.0 4.0 4.1 4.2 4.3 4.4 4.5 4.6 4.7 4.7 4.8 4.9 5.0 5.1 5.2 5.3 5.4 5.4 5.5 5.6 5.7 5.8 5.9 6.0 6.1 6.1 6.2 6.3 6.4 6.5 6.6 6.7 6.8 6.8 6.9 7.0 7.1 7.2 7.3 7.4 7.5 7.6 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.3 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.7 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.4 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.2 11.3 11.4 11.5 11.6 11.7 11.8 11.9 11.9 12.0 12.1 12.2 12.3 12.4 12.5 12.6 12.6 12.7 12.8 12.9 13.0 13.1 13.2 13.3 13.3 13.4 13.5 13.6 13.7 13.8 13.9 14.0 14.0 14.1 14.2 14.3 14.4 14.5 14.6 14.7 14.7 14.8 14.9 15.0 15.1 15.2 15.3 15.4 15.5 15.5 15.6 15.7 15.8 15.9 16.0 16.1 16.2 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.9 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.3 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.8 19.9 20.0 20.1 20.2 20.3 20.4 20.5 20.5 20.6 20.7 20.8 20.9 21.0 21.1 21.2 21.2 21.3 21.4 21.5 21.6 21.7 21.8 21.9 21.9 22.0 22.1 22.2 22.3 22.4 22.5 22.6 22.7 22.7 22.8 22.9 23.0 23.1 23.2 23.3 23.4 23.4 23.5 23.6 23.7 23.8 23.9 24.0 24.1 24.1 24.2 24.3 24.4 24.5 24.6 24.7 24.8 24.8 24.9 25.0 25.1 25.2 25.3 25.4 25.5 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.3 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.4 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.1 29.2 29.3 29.4 29.5 29.6 29.7 29.8 29.9 29.9 30.0 30.1 30.2 30.3 30.4 30.5 30.6 30.6 30.7 30.8 30.9 31.0 31.1 31.2 31.3 31.3 31.4 31.5 31.6 31.7 31.8 31.9 32.0 32.0 32.1 32.2 32.3 32.4 32.5 32.6 32.7 32.7 32.8 32.9 33.0 33.1 33.2 33.3 33.4 33.5 33.5 33.6 33.7 33.8 33.9 34.0 34.1 34.2 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.9 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.6 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.8 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.5 38.6 38.7 38.8 38.9 39.0 39.1 39.2 39.2 39.3 39.4 39.5 39.6 39.7 39.8 39.9 39.9 40.0 40.1 40.2 40.3 40.4 40.5 40.6 40.6 40.7 40.8 40.9 41.0 41.1 41.2 41.3 41.4 41.4 41.5 41.6 41.7 41.8 41.9 42.0 42.1 42.1 42.2 42.3 42.4 42.5 42.6 42.7 42.8 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.5 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.2 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 45.0 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.4 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.1 47.2 47.3 47.4 47.5 47.6 47.7 47.8 47.8 47.9 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.6 48.7 48.8 48.9 49.0 49.1 49.2 49.3 49.3 49.4 49.5 49.6 49.7 49.8 49.9 50.0 50.0 50.1 50.2 50.3 50.4 50.5 50.6 50.7 50.7 50.8 50.9 51.0 51.1 51.2 51.3 51.4 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.1 52.2 52.2 52.3 52.4 52.5 52.6 52.7 52.8 52.9 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.6 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.0 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.8 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.5 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.2 57.3 57.4 57.5 57.6 57.7 57.8 57.9 57.9 58.0 58.1 58.2 58.3 58.4 58.5 58.6 58.6 58.7 58.8 58.9 59.0 59.1 59.2 59.3 59.4 59.4 59.5 59.6 59.7 59.8 59.9 60.0 60.1 60.1 60.2 60.3 60.4 60.5 60.6 60.7 60.8 60.8 60.9 61.0 61.1 61.2 61.3 61.4 61.5 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.2 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.9 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.4 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.1 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.8 65.9 66.0 66.1 66.2 66.3 66.4 66.5 66.5 66.6 66.7 66.8 66.9 67.0 67.1 67.2 67.3 67.3 67.4 67.5 67.6 67.7 67.8 67.9 68.0 68.0 68.1 68.2 68.3 68.4 68.5 68.6 68.7 68.7 68.8 68.9 69.0 69.1 69.2 69.3 69.4 69.4 69.5 69.6 69.7 69.8 69.9 70.0 70.1 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.8 70.9 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.6 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.7 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.5 74.6 74.7 74.8 74.9 75.0 75.1 75.2 75.2 75.3 75.4 75.5 75.6 75.7 75.8 75.9 75.9 76.0 76.1 76.2 76.3 76.4 76.5 76.6 76.6 76.7 76.8 76.9 77.0 77.1 77.2 77.3 77.3 77.4 77.5 77.6 77.7 77.8 77.9 78.0 78.1 78.1 78.2 78.3 78.4 78.5 78.6 78.7 78.8 78.8 78.9 79.0 79.1 79.2 79.3 79.4 79.5 79.5 79.6 79.7 79.8 79.9 80.0 80.1 80.2 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.7 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.1 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.8 83.9 84.0 84.1 84.2 84.3 84.4 84.5 84.5 84.6 84.7 84.8 84.9 85.0 85.1 85.2 85.3 85.3 85.4 85.5 85.6 85.7 85.8 85.9 86.0 86.0 86.1 86.2 86.3 86.4 86.5 86.6 86.7 86.7 86.8 86.9 87.0 87.1 87.2 87.3 87.4 87.4 87.5 87.6 87.7 87.8 87.9 88.0 88.1 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.8 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.6 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.3 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.7 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.4 92.5 92.6 92.7 92.8 92.9 93.0 93.1 93.2 93.2 93.3 93.4 93.5 93.6 93.7 93.8 93.9 93.9 94.0 94.1 94.2 94.3 94.4 94.5 94.6 94.6 94.7 94.8 94.9 95.0 95.1 95.2 95.3 95.3 95.4 95.5 95.6 95.7 95.8 95.9 96.0 96.0 96.1 96.2 96.3 96.4 96.5 96.6 96.7 96.8 96.8 96.9 97.0 97.1 97.2 97.3 97.4 97.5 97.5 97.6 97.7 97.8 97.9 98.0 98.1 98.2 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.9 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.6 99.7 99.8 99.9 -found 47 predictions from path traversal Error with prediction: snap lend_intergenic: 11220, rend_intergenic: 5942 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 12241, rend_intergenic: 11472 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 59205, rend_intergenic: 51975 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64067, rend_intergenic: 62066 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90934, rend_intergenic: 85098 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 99364, rend_intergenic: 94227 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 112490, rend_intergenic: 101666 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 130555, rend_intergenic: 119162 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 143973, rend_intergenic: 130612 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167391, rend_intergenic: 144538 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168591, rend_intergenic: 167455 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 215815, rend_intergenic: 192510 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 220040, rend_intergenic: 218377 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 222870, rend_intergenic: 222225 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 228798, rend_intergenic: 223453 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 235321, rend_intergenic: 230717 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 238649, rend_intergenic: 236071 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 28 predictions persist after filtering for low support