-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_5/scaffold_5_12487977-12647100

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g8738.t1
Valid prediction for snap_scaffold_5-snap.2325-T1
Valid prediction for snap_scaffold_5-snap.2333-T1
Valid prediction for GlimmerHMM_glimmerT_13089-T1
Valid prediction for snap_scaffold_5-snap.2337-T1
Valid prediction for Augustus_model.g8741.t1
Valid prediction for GeneMark_model.22098_t
Valid prediction for snap_scaffold_5-snap.2354-T1
Valid prediction for GeneMark_model.22102_t
Valid prediction for snap_scaffold_5-snap.2343-T1
Valid prediction for Augustus_model.g8734.t1
Valid prediction for GeneMark_model.22096_t
Valid prediction for GeneMark_model.22108_t
Valid prediction for GlimmerHMM_glimmerT_13103-T1
Valid prediction for GeneMark_model.22083_t
Valid prediction for snap_scaffold_5-snap.2355-T1
Valid prediction for GeneMark_model.22106_t
Valid prediction for GeneMark_model.22110_t
Valid prediction for GlimmerHMM_glimmerT_13104-T1
Couldn't classify 14546, 14647
Couldn't classify 14758, 15162
Sorry, prediction pasa_asmbl_44477.p1 fails validation.
(ATT)	 TC	14546-14647	GT	AGG
(CTG)	 AG	14758-15162	AA	CCA
Valid prediction for snap_scaffold_5-snap.2327-T1
Valid prediction for snap_scaffold_5-snap.2338-T1
Valid prediction for GeneMark_model.22091_t
Valid prediction for GlimmerHMM_glimmerT_13090-T1
Valid prediction for snap_scaffold_5-snap.2336-T1
Valid prediction for snap_scaffold_5-snap.2328-T1
Valid prediction for GeneMark_model.22088_t
Valid prediction for snap_scaffold_5-snap.2348-T1
Valid prediction for GeneMark_model.22080_t
Valid prediction for GeneMark_model.22100_t
Valid prediction for GeneMark_model.22085_t
Valid prediction for Augustus_model.g8729.t1
Valid prediction for GeneMark_model.22078_t
Valid prediction for snap_scaffold_5-snap.2351-T1
Valid prediction for snap_scaffold_5-snap.2335-T1
Valid prediction for Augustus_model.g8742.t1
Valid prediction for snap_scaffold_5-snap.2339-T1
Valid prediction for Augustus_model.g8743.t1
Valid prediction for snap_scaffold_5-snap.2345-T1
Valid prediction for GeneMark_model.22105_t
Valid prediction for Augustus_model.g8739.t1
Valid prediction for GeneMark_model.22092_t
Valid prediction for GlimmerHMM_glimmerT_13102-T1
Valid prediction for HiQ_model.g8728.t1
Valid prediction for GlimmerHMM_glimmerT_13099-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g8735.t1
Valid prediction for pasa_asmbl_45853.p1
Couldn't classify 100608, 100628
Couldn't classify 101673, 101841
Sorry, prediction pasa_asmbl_45846.p1 fails validation.
(CTG)	 AC	100608-100628	GT	AGG
(GAC)	 AG	100742-100894	GT	AGG
(ATC)	 AG	101018-101245	GT	AGG
(GAC)	 AG	101427-101584	GT	GGG
(CTC)	 AG	101673-101841	AA	CCA
-recovered pasa_asmbl_45846.p1, internal, 100742, 100894
-recovered pasa_asmbl_45846.p1, internal, 101018, 101245
-recovered pasa_asmbl_45846.p1, internal, 101427, 101584
Valid prediction for GeneMark_model.22099_t
Valid prediction for GeneMark_model.22090_t
Valid prediction for GeneMark_model.22074_t
Valid prediction for snap_scaffold_5-snap.2349-T1
Valid prediction for snap_scaffold_5-snap.2352-T1
Valid prediction for HiQ_model.g8737.t1
Valid prediction for GeneMark_model.22079_t
Valid prediction for GlimmerHMM_glimmerT_13096-T1
Valid prediction for GlimmerHMM_glimmerT_13094-T1
Valid prediction for Augustus_model.g8725.t1
Couldn't classify 95666, 95688
Couldn't classify 96363, 96482
Sorry, prediction pasa_asmbl_46397.p1 fails validation.
(GAC)	 TA	95666-95688	GT	AGG
(GTC)	 AG	95956-96074	GT	CGG
(GCC)	 AG	96167-96264	GT	GGG
(CGT)	 AG	96363-96482	CT	TCC
-recovered pasa_asmbl_46397.p1, internal, 95956, 96074
-recovered pasa_asmbl_46397.p1, internal, 96167, 96264
Valid prediction for Augustus_model.g8730.t1
Valid prediction for CodingQuarry_transcript_52159-T1
Valid prediction for GeneMark_model.22081_t
Couldn't classify 88039, 88117
Couldn't classify 90644, 90838
Sorry, prediction pasa_asmbl_45848.p1 fails validation.
(GAC)	 TG	88039-88117	GT	TGG
(TGG)	 AG	88293-88432	GT	AGG
(GTT)	 AG	88558-88660	GT	TGG
(GGG)	 AG	88763-88904	GT	GGG
(GTT)	 AG	89003-89127	GT	AGG
(GTG)	 AG	89226-89350	GT	GTG
(TTG)	 AG	89632-89691	GT	AGG
(CAC)	 AG	89784-89974	GT	GGG
(ACA)	 AG	90084-90192	GT	CAG
(GGC)	 AG	90373-90510	GT	AGG
(GCC)	 AG	90644-90838	AA	CCA
-recovered pasa_asmbl_45848.p1, internal, 88293, 88432
-recovered pasa_asmbl_45848.p1, internal, 88558, 88660
-recovered pasa_asmbl_45848.p1, internal, 88763, 88904
-recovered pasa_asmbl_45848.p1, internal, 89003, 89127
-recovered pasa_asmbl_45848.p1, internal, 89226, 89350
-recovered pasa_asmbl_45848.p1, internal, 89632, 89691
-recovered pasa_asmbl_45848.p1, internal, 89784, 89974
-recovered pasa_asmbl_45848.p1, internal, 90084, 90192
-recovered pasa_asmbl_45848.p1, internal, 90373, 90510
Valid prediction for HiQ_model.g8733.t1
Valid prediction for GeneMark_model.22082_t
Valid prediction for GeneMark_model.22076_t
Valid prediction for GlimmerHMM_glimmerT_13101-T1
Valid prediction for snap_scaffold_5-snap.2353-T1
Couldn't classify 66461, 66606
Sorry, prediction pasa_asmbl_45854.p1 fails validation.
(AAG)	 GA	66461-66606	GT	GGG
(TGC)	 AG	66857-67019	GT	AGG
(TTC)	 AG	67145-67263	GT	AGG
(GGA)	 AG	67347-67425	GT	AGG
(AGG)	 AG	67590-67766	GT	GGG
(TTG)	 AG	68155-68292	GT	AGG
(GTG)	 AG	68380-68474	GT	AGG
(TGA)	 AG	68628-68784	GT	AGG
(AGT)	 AG	68904-69066	GT	AGG
(CCC)	 AG	69726-69844	GT	AGG
(CTG)	 AG	69990-70208	GT	AGG
(GAT)	 AG	70662-70784	GT	GTG
(TGT)	 AG	70968-71089	GT	AGG
(GGA)	 AG	71501-71639	GT	AGG
(GCC)	 AG	71737-71856	GT	GGG
(GTG)	 AG	72672-72848	GT	GGG
(TTG)	 AG	72959-73092	GT	TGG
(GTT)	 AG	73239-73330	GT	AGG
(GTA)	 AG	73448-73562	GT	AAG
(GTT)	 AG	73759-73885	GT	AGG
(GAG)	 AG	73965-74117	GC	GAG
-recovered pasa_asmbl_45854.p1, terminal, 73965, 74117
-recovered pasa_asmbl_45854.p1, internal, 66857, 67019
-recovered pasa_asmbl_45854.p1, internal, 67145, 67263
-recovered pasa_asmbl_45854.p1, internal, 67347, 67425
-recovered pasa_asmbl_45854.p1, internal, 67590, 67766
-recovered pasa_asmbl_45854.p1, internal, 68155, 68292
-recovered pasa_asmbl_45854.p1, internal, 68380, 68474
-recovered pasa_asmbl_45854.p1, internal, 68628, 68784
-recovered pasa_asmbl_45854.p1, internal, 68904, 69066
-recovered pasa_asmbl_45854.p1, internal, 69726, 69844
-recovered pasa_asmbl_45854.p1, internal, 69990, 70208
-recovered pasa_asmbl_45854.p1, internal, 70662, 70784
-recovered pasa_asmbl_45854.p1, internal, 70968, 71089
-recovered pasa_asmbl_45854.p1, internal, 71501, 71639
-recovered pasa_asmbl_45854.p1, internal, 71737, 71856
-recovered pasa_asmbl_45854.p1, internal, 72672, 72848
-recovered pasa_asmbl_45854.p1, internal, 72959, 73092
-recovered pasa_asmbl_45854.p1, internal, 73239, 73330
-recovered pasa_asmbl_45854.p1, internal, 73448, 73562
-recovered pasa_asmbl_45854.p1, internal, 73759, 73885
-recovered pasa_asmbl_45854.p1, internal, 73965, 74117
Valid prediction for GeneMark_model.22097_t
Valid prediction for snap_scaffold_5-snap.2346-T1
Valid prediction for GlimmerHMM_glimmerT_13088-T1
Valid prediction for GeneMark_model.22086_t
Valid prediction for GeneMark_model.22087_t
Valid prediction for snap_scaffold_5-snap.2356-T1
Valid prediction for GeneMark_model.22077_t
Valid prediction for GeneMark_model.22094_t
Valid prediction for GeneMark_model.22104_t
Valid prediction for GeneMark_model.22101_t
Valid prediction for snap_scaffold_5-snap.2332-T1
Valid prediction for GlimmerHMM_glimmerT_13097-T1
Valid prediction for HiQ_model.g8731.t1
Couldn't classify 79265, 79414
Sorry, prediction pasa_asmbl_45852.p1 fails validation.
(ATG)	 CA	77119-77210	GT	TGG
(GCG)	 AG	77735-77862	GT	CAG
(CTT)	 AG	77999-78064	GT	AGG
(ATG)	 AG	78227-78320	GT	AGG
(TTT)	 AG	78421-78546	GT	AGG
(TGA)	 AG	78630-78756	GT	AGG
(AGG)	 AG	78946-79095	GT	AGG
(TCT)	 AG	79265-79414	CT	CCC
-recovered pasa_asmbl_45852.p1, initial, 77119, 77210
-recovered pasa_asmbl_45852.p1, initial, 78227, 78320
-recovered pasa_asmbl_45852.p1, internal, 77735, 77862
-recovered pasa_asmbl_45852.p1, internal, 77999, 78064
-recovered pasa_asmbl_45852.p1, internal, 78227, 78320
-recovered pasa_asmbl_45852.p1, internal, 78421, 78546
-recovered pasa_asmbl_45852.p1, internal, 78630, 78756
-recovered pasa_asmbl_45852.p1, internal, 78946, 79095
Valid prediction for Augustus_model.g8726.t1
Valid prediction for snap_scaffold_5-snap.2322-T1
Valid prediction for GlimmerHMM_glimmerT_13087-T1
Valid prediction for snap_scaffold_5-snap.2334-T1
Valid prediction for snap_scaffold_5-snap.2357-T1
Valid prediction for Augustus_model.g8740.t1
Valid prediction for snap_scaffold_5-snap.2331-T1
Valid prediction for snap_scaffold_5-snap.2326-T1
Valid prediction for GeneMark_model.22089_t
Valid prediction for Augustus_model.g8732.t1
Couldn't classify 126915, 126974
Sorry, prediction pasa_asmbl_45839.p1 fails validation.
(TGG)	 GA	126915-126974	GT	AGG
(AAC)	 AG	127415-127510	GT	ATG
(CAA)	 AG	128059-128229	GT	AGG
(GGA)	 AG	128314-128483	GT	TTG
(GCG)	 AG	129209-129356	GT	AGG
(GAT)	 AG	129445-129534	GT	AGG
(CTG)	 AG	129619-129755	GT	AGG
(GAA)	 AG	130010-130115	TG	GAT
-recovered pasa_asmbl_45839.p1, terminal, 130010, 130115
-recovered pasa_asmbl_45839.p1, internal, 127415, 127510
-recovered pasa_asmbl_45839.p1, internal, 128059, 128229
-recovered pasa_asmbl_45839.p1, internal, 128314, 128483
-recovered pasa_asmbl_45839.p1, internal, 129209, 129356
-recovered pasa_asmbl_45839.p1, internal, 129445, 129534
-recovered pasa_asmbl_45839.p1, internal, 129619, 129755
Couldn't classify 82442, 82465
Sorry, prediction pasa_asmbl_46313.p1 fails validation.
(GTT)	 TG	82442-82465	GT	AGG
(CTT)	 AG	82633-82782	GT	AGG
(ACC)	 AG	82902-83063	GT	AGG
(GTG)	 AG	83231-83350	GC	AGG
(GAC)	 AG	83478-83615	GT	AGG
(TAC)	 AG	83726-83899	GT	TGG
(TAT)	 AG	84051-84261	GT	GGG
(TGG)	 AG	84432-84516	GT	CGG
(TGA)	 AG	84628-84757	GT	TGG
(GTG)	 AG	84911-85090	AG	AAA
-recovered pasa_asmbl_46313.p1, terminal, 84911, 85090
-recovered pasa_asmbl_46313.p1, internal, 82633, 82782
-recovered pasa_asmbl_46313.p1, internal, 82902, 83063
-recovered pasa_asmbl_46313.p1, internal, 83231, 83350
-recovered pasa_asmbl_46313.p1, internal, 83478, 83615
-recovered pasa_asmbl_46313.p1, internal, 83726, 83899
-recovered pasa_asmbl_46313.p1, internal, 84051, 84261
-recovered pasa_asmbl_46313.p1, internal, 84432, 84516
-recovered pasa_asmbl_46313.p1, internal, 84628, 84757
Valid prediction for GlimmerHMM_glimmerT_13093-T1
Valid prediction for snap_scaffold_5-snap.2342-T1
Valid prediction for GeneMark_model.22107_t
Valid prediction for GeneMark_model.22095_t
Valid prediction for snap_scaffold_5-snap.2323-T1
Valid prediction for pasa_asmbl_45845.p2
Valid prediction for GeneMark_model.22093_t
Valid prediction for snap_scaffold_5-snap.2330-T1
Valid prediction for GlimmerHMM_glimmerT_13095-T1
Valid prediction for snap_scaffold_5-snap.2350-T1
Valid prediction for GlimmerHMM_glimmerT_13091-T1
Valid prediction for GeneMark_model.22109_t
Couldn't classify 80986, 81018
Couldn't classify 82266, 82381
Sorry, prediction pasa_asmbl_45851.p1 fails validation.
(AAT)	 AT	80986-81018	GT	AGG
(CTG)	 AG	81122-81218	GT	TGG
(GCC)	 AG	81343-81459	GT	TGG
(ATG)	 AG	82266-82381	AA	TGA
-recovered pasa_asmbl_45851.p1, internal, 81122, 81218
-recovered pasa_asmbl_45851.p1, internal, 81343, 81459
Couldn't classify 99503, 99664
Sorry, prediction pasa_asmbl_46382.p1 fails validation.
(ATG)	 GC	98023-98205	GT	CTG
(GAT)	 AG	98431-98501	GT	TGG
(GTA)	 AG	98628-98820	GT	CGG
(GCC)	 AG	99503-99664	GA	ACG
-recovered pasa_asmbl_46382.p1, initial, 98023, 98205
-recovered pasa_asmbl_46382.p1, internal, 98431, 98501
-recovered pasa_asmbl_46382.p1, internal, 98628, 98820
Couldn't classify 92306, 92392
Couldn't classify 93002, 93016
Sorry, prediction pasa_asmbl_45847.p1 fails validation.
(GAG)	 TG	92306-92392	GT	TGG
(TTC)	 AG	92539-92695	GT	AGG
(GTT)	 AG	92807-92892	GT	AGG
(AGC)	 AG	93002-93016	CA	AGC
-recovered pasa_asmbl_45847.p1, internal, 92539, 92695
-recovered pasa_asmbl_45847.p1, internal, 92807, 92892
Valid prediction for snap_scaffold_5-snap.2341-T1
Valid prediction for snap_scaffold_5-snap.2324-T1
Valid prediction for snap_scaffold_5-snap.2340-T1
Valid prediction for Augustus_model.g8727.t1
Valid prediction for GlimmerHMM_glimmerT_13100-T1
Valid prediction for Augustus_model.g8736.t1
Valid prediction for snap_scaffold_5-snap.2344-T1
Valid prediction for GlimmerHMM_glimmerT_13092-T1
Valid prediction for GeneMark_model.22103_t
Valid prediction for snap_scaffold_5-snap.2329-T1
Valid prediction for GeneMark_model.22084_t
Valid prediction for snap_scaffold_5-snap.2347-T1
Valid prediction for GlimmerHMM_glimmerT_13098-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 37069, rend_intergenic: 34251  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71205, rend_intergenic: 40513  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92706, rend_intergenic: 87505  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108836, rend_intergenic: 100922  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125025, rend_intergenic: 115266  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127417, rend_intergenic: 125212  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132202, rend_intergenic: 129362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157059, rend_intergenic: 139122  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 159124
-exon list size: 704


building trellis

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45.6    
45.8    
45.9    
46.0    
46.2    
46.3    
46.5    
46.6    
46.7    
46.9    
47.0    
47.2    
47.3    
47.5    
47.6    
47.7    
47.9    
48.0    
48.2    
48.3    
48.4    
48.6    
48.7    
48.9    
49.0    
49.2    
49.3    
49.4    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.6    
50.7    
50.8    
51.0    
51.1    
51.3    
51.4    
51.6    
51.7    
51.8    
52.0    
52.1    
52.3    
52.4    
52.5    
52.7    
52.8    
53.0    
53.1    
53.3    
53.4    
53.5    
53.7    
53.8    
54.0    
54.1    
54.2    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.2    
55.4    
55.5    
55.7    
55.8    
55.9    
56.1    
56.2    
56.4    
56.5    
56.7    
56.8    
56.9    
57.1    
57.2    
57.4    
57.5    
57.6    
57.8    
57.9    
58.1    
58.2    
58.4    
58.5    
58.6    
58.8    
58.9    
59.1    
59.2    
59.3    
59.5    
59.6    
59.8    
59.9    
60.1    
60.2    
60.3    
60.5    
60.6    
60.8    
60.9    
61.0    
61.2    
61.3    
61.5    
61.6    
61.8    
61.9    
62.0    
62.2    
62.3    
62.5    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.7    
63.9    
64.0    
64.2    
64.3    
64.4    
64.6    
64.7    
64.9    
65.0    
65.2    
65.3    
65.4    
65.6    
65.7    
65.9    
66.0    
66.1    
66.3    
66.4    
66.6    
66.7    
66.9    
67.0    
67.1    
67.3    
67.4    
67.6    
67.7    
67.8    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.8    
69.0    
69.1    
69.3    
69.4    
69.5    
69.7    
69.8    
70.0    
70.1    
70.3    
70.4    
70.5    
70.7    
70.8    
71.0    
71.1    
71.2    
71.4    
71.5    
71.7    
71.8    
72.0    
72.1    
72.2    
72.4    
72.5    
72.7    
72.8    
72.9    
73.1    
73.2    
73.4    
73.5    
73.7    
73.8    
73.9    
74.1    
74.2    
74.4    
74.5    
74.6    
74.8    
74.9    
75.1    
75.2    
75.4    
75.5    
75.6    
75.8    
75.9    
76.1    
76.2    
76.3    
76.5    
76.6    
76.8    
76.9    
77.1    
77.2    
77.3    
77.5    
77.6    
77.8    
77.9    
78.0    
78.2    
78.3    
78.5    
78.6    
78.8    
78.9    
79.0    
79.2    
79.3    
79.5    
79.6    
79.7    
79.9    
80.0    
80.2    
80.3    
80.5    
80.6    
80.7    
80.9    
81.0    
81.2    
81.3    
81.4    
81.6    
81.7    
81.9    
82.0    
82.2    
82.3    
82.4    
82.6    
82.7    
82.9    
83.0    
83.1    
83.3    
83.4    
83.6    
83.7    
83.9    
84.0    
84.1    
84.3    
84.4    
84.6    
84.7    
84.8    
85.0    
85.1    
85.3    
85.4    
85.6    
85.7    
85.8    
86.0    
86.1    
86.3    
86.4    
86.5    
86.7    
86.8    
87.0    
87.1    
87.3    
87.4    
87.5    
87.7    
87.8    
88.0    
88.1    
88.2    
88.4    
88.5    
88.7    
88.8    
89.0    
89.1    
89.2    
89.4    
89.5    
89.7    
89.8    
89.9    
90.1    
90.2    
90.4    
90.5    
90.7    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.6    
91.8    
91.9    
92.1    
92.2    
92.4    
92.5    
92.6    
92.8    
92.9    
93.1    
93.2    
93.3    
93.5    
93.6    
93.8    
93.9    
94.1    
94.2    
94.3    
94.5    
94.6    
94.8    
94.9    
95.0    
95.2    
95.3    
95.5    
95.6    
95.8    
95.9    
96.0    
96.2    
96.3    
96.5    
96.6    
96.7    
96.9    
97.0    
97.2    
97.3    
97.5    
97.6    
97.7    
97.9    
98.0    
98.2    
98.3    
98.4    
98.6    
98.7    
98.9    
99.0    
99.2    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 28 predictions from path traversal
Error with prediction: snap lend_intergenic: 37069, rend_intergenic: 34251  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71205, rend_intergenic: 40513  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92706, rend_intergenic: 87505  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108836, rend_intergenic: 100922  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 125025, rend_intergenic: 115266  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127417, rend_intergenic: 125212  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 132202, rend_intergenic: 129362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157059, rend_intergenic: 139122  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 19 predictions persist after filtering for low support