-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_487

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 5244, 5417
Sorry, prediction GlimmerHMM_glimmerT_61907-T1 fails validation.
(ATG)	 AC	4609-4818	GT	AGG
(GCT)	 AG	4946-5120	GT	AGG
(GTG)	 AG	5244-5417	GT	TAG
-recovered GlimmerHMM_glimmerT_61907-T1, initial, 4609, 4818
-recovered GlimmerHMM_glimmerT_61907-T1, internal, 4946, 5120
-recovered GlimmerHMM_glimmerT_61907-T1, internal, 5244, 5417
Valid prediction for Augustus_model.g41152.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 6571
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support