-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_448

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g41120.t1
Valid prediction for snap_scaffold_448-snap.3-T1
Valid prediction for GlimmerHMM_glimmerT_61863-T1
add_exon() Sorry, GlimmerHMM_glimmerT_61863-T1 780-1177-terminal-1 is invalid.
Valid prediction for GeneMark_model.107657_t
add_exon() Sorry, GeneMark_model.107657_t 780-1177-terminal-1 is invalid.
Valid prediction for GlimmerHMM_glimmerT_61862-T1
Valid prediction for GlimmerHMM_glimmerT_61861-T1
Valid prediction for snap_scaffold_448-snap.2-T1
Valid prediction for snap_scaffold_448-snap.1-T1
Valid prediction for Augustus_model.g41119.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 6930
-exon list size: 15


building trellis

5.9    
11.8    
17.6    
23.5    
29.4    
35.3    
41.2    
47.1    
52.9    
58.8    
64.7    
70.6    
76.5    
82.4    
88.2    
94.1    
-found 3 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 3 predictions persist after filtering for low support