-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_429

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 2249, 2312
Couldn't classify 6646, 6727
Sorry, prediction snap_scaffold_429-snap.1-T1 fails validation.
(GTT)	 AG	2249-2312	GT	TGG
(TCG)	 AG	2789-2877	GT	AGG
(TTA)	 AG	6646-6727	GT	AGG
-recovered snap_scaffold_429-snap.1-T1, internal, 2249, 2312
-recovered snap_scaffold_429-snap.1-T1, internal, 2789, 2877
-recovered snap_scaffold_429-snap.1-T1, internal, 6646, 6727

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.107610_t
Valid prediction for Augustus_model.g41103.t1
Valid prediction for GlimmerHMM_glimmerT_61837-T1
Valid prediction for GeneMark_model.107609_t
Valid prediction for GeneMark_model.107611_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 7042
-exon list size: 14


building trellis

6.2    
12.5    
18.8    
25.0    
31.2    
37.5    
43.8    
50.0    
56.2    
62.5    
68.8    
75.0    
81.2    
87.5    
93.8    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support