-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_4/scaffold_4_8067896-8250433

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.16133_t
Valid prediction for GeneMark_model.16151_t
Valid prediction for CodingQuarry_transcript_48959-T1
Valid prediction for GeneMark_model.16125_t
Valid prediction for snap_scaffold_4-snap.1726-T1
Valid prediction for snap_scaffold_4-snap.1721-T1
Valid prediction for GeneMark_model.16121_t
Valid prediction for GeneMark_model.16126_t
Valid prediction for GeneMark_model.16143_t
Valid prediction for snap_scaffold_4-snap.1708-T1
Valid prediction for GlimmerHMM_glimmerT_9943-T1
Valid prediction for snap_scaffold_4-snap.1730-T1
Valid prediction for GlimmerHMM_glimmerT_9954-T1
Valid prediction for GlimmerHMM_glimmerT_9951-T1
Valid prediction for GlimmerHMM_glimmerT_9937-T1
Valid prediction for pasa_asmbl_42870.p1
Valid prediction for GeneMark_model.16140_t
Valid prediction for GeneMark_model.16122_t
Valid prediction for HiQ_model.g6504.t1
Valid prediction for GeneMark_model.16166_t
Valid prediction for GeneMark_model.16162_t
Valid prediction for snap_scaffold_4-snap.1702-T1
Valid prediction for Augustus_model.g6510.t1
Valid prediction for GlimmerHMM_glimmerT_9942-T1
Valid prediction for GeneMark_model.16127_t
Valid prediction for Augustus_model.g6518.t1
Valid prediction for snap_scaffold_4-snap.1705-T1
Valid prediction for GeneMark_model.16153_t
Valid prediction for GeneMark_model.16145_t
Valid prediction for Augustus_model.g6513.t1
Valid prediction for GeneMark_model.16123_t
Valid prediction for GeneMark_model.16130_t
Valid prediction for snap_scaffold_4-snap.1710-T1
Valid prediction for GeneMark_model.16138_t
Valid prediction for snap_scaffold_4-snap.1720-T1
Valid prediction for GeneMark_model.16167_t
Valid prediction for GeneMark_model.16148_t
Valid prediction for GeneMark_model.16146_t
Valid prediction for GeneMark_model.16154_t
Valid prediction for GlimmerHMM_glimmerT_9952-T1
Valid prediction for GeneMark_model.16159_t
Valid prediction for GlimmerHMM_glimmerT_9930-T1
Valid prediction for GeneMark_model.16136_t
Valid prediction for snap_scaffold_4-snap.1715-T1
Valid prediction for GeneMark_model.16135_t
Valid prediction for GeneMark_model.16164_t
Valid prediction for snap_scaffold_4-snap.1729-T1
Sorry, intron length (6) is less than minimum required (10)
Valid prediction for snap_scaffold_4-snap.1713-T1
Valid prediction for snap_scaffold_4-snap.1699-T1
Valid prediction for snap_scaffold_4-snap.1718-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_4-snap.1701-T1
Couldn't classify 90676, 90833
Couldn't classify 93404, 93505
Sorry, prediction pasa_asmbl_41491.p2 fails validation.
(TTC)	 AG	90676-90833	GT	CTG
(TAT)	 AG	93080-93218	GT	AGG
(CCA)	 AG	93404-93505	AG	GGA
-recovered pasa_asmbl_41491.p2, internal, 90676, 90833
-recovered pasa_asmbl_41491.p2, internal, 93080, 93218
Valid prediction for GeneMark_model.16158_t
Valid prediction for GlimmerHMM_glimmerT_9944-T1
Couldn't classify 26211, 26336
Couldn't classify 30909, 31046
Sorry, prediction pasa_asmbl_41502.p1 fails validation.
(GGG)	 CA	26211-26336	GT	AGG
(AGT)	 AG	28499-28612	GT	TGG
(ATG)	 AG	30909-31046	CA	GTC
-recovered pasa_asmbl_41502.p1, internal, 28499, 28612
Couldn't classify 67886, 68034
Couldn't classify 68330, 68647
Sorry, prediction CodingQuarry_transcript_48963-T1 fails validation.
(ATG)	 TG	67886-68034	AT	GTA
(TCT)	 TC	68330-68647	GT	AGG
(GGA)	 AG	68766-68868	GT	AAG
(GTG)	 AG	69060-69179	AC	GAA
-recovered CodingQuarry_transcript_48963-T1, terminal, 69060, 69179
-recovered CodingQuarry_transcript_48963-T1, internal, 68766, 68868
Valid prediction for snap_scaffold_4-snap.1731-T1
Couldn't classify 67216, 67371
Sorry, prediction pasa_asmbl_41495.p1 fails validation.
(AGC)	 GC	67216-67371	GT	AGG
(GAG)	 AG	67486-67584	GT	AGG
(GCT)	 AG	67810-68032	GT	TGG
(CAC)	 AG	68338-68647	GT	AGG
(GGA)	 AG	68766-68868	GT	AAG
(GTG)	 AG	69060-69179	AC	GAA
-recovered pasa_asmbl_41495.p1, terminal, 69060, 69179
-recovered pasa_asmbl_41495.p1, internal, 67486, 67584
-recovered pasa_asmbl_41495.p1, internal, 67810, 68032
-recovered pasa_asmbl_41495.p1, internal, 68338, 68647
-recovered pasa_asmbl_41495.p1, internal, 68766, 68868
Valid prediction for GlimmerHMM_glimmerT_9953-T1
Valid prediction for snap_scaffold_4-snap.1733-T1
Valid prediction for CodingQuarry_transcript_48965-T1
Valid prediction for snap_scaffold_4-snap.1728-T1
Valid prediction for GlimmerHMM_glimmerT_9934-T1
Couldn't classify 64923, 65090
Couldn't classify 65905, 66062
Sorry, prediction pasa_asmbl_41497.p1 fails validation.
(GGA)	 AG	64923-65090	GT	AGG
(GAG)	 AG	65400-65664	GT	AGG
(GAA)	 AG	65905-66062	AA	TCA
-recovered pasa_asmbl_41497.p1, internal, 64923, 65090
-recovered pasa_asmbl_41497.p1, internal, 65400, 65664
Valid prediction for GeneMark_model.16169_t
Valid prediction for GeneMark_model.16124_t
Valid prediction for GeneMark_model.16128_t
Valid prediction for snap_scaffold_4-snap.1697-T1
Valid prediction for pasa_asmbl_42387.p1
Valid prediction for HiQ_model.g6503.t1
Valid prediction for GlimmerHMM_glimmerT_9939-T1
Couldn't classify 64092, 64730
Sorry, prediction pasa_asmbl_41498.p1 fails validation.
(TGC)	 GC	64092-64730	GG	AGG
Valid prediction for Augustus_model.g6507.t1
Valid prediction for snap_scaffold_4-snap.1735-T1
Valid prediction for snap_scaffold_4-snap.1717-T1
Valid prediction for snap_scaffold_4-snap.1719-T1
Valid prediction for GlimmerHMM_glimmerT_9931-T1
Valid prediction for HiQ_model.g6521.t1
Valid prediction for snap_scaffold_4-snap.1724-T1
Valid prediction for GeneMark_model.16147_t
Valid prediction for CodingQuarry_transcript_48962-T1
Valid prediction for GeneMark_model.16134_t
Valid prediction for GeneMark_model.16132_t
Valid prediction for snap_scaffold_4-snap.1700-T1
Valid prediction for snap_scaffold_4-snap.1703-T1
Valid prediction for GeneMark_model.16165_t
Valid prediction for GlimmerHMM_glimmerT_9929-T1
Couldn't classify 134255, 134487
Sorry, prediction pasa_asmbl_41489.p1 fails validation.
(ATG)	 AG	132127-132138	GT	GGG
(CAG)	 AG	132545-132608	GT	AAG
(CTC)	 AG	133092-133224	GT	GGG
(GAA)	 AG	133509-133618	GT	GGG
(GAG)	 AG	133875-134018	GT	CGG
(AGC)	 AG	134255-134487	GA	GGG
-recovered pasa_asmbl_41489.p1, initial, 132127, 132138
-recovered pasa_asmbl_41489.p1, internal, 132127, 132138
-recovered pasa_asmbl_41489.p1, internal, 132545, 132608
-recovered pasa_asmbl_41489.p1, internal, 133092, 133224
-recovered pasa_asmbl_41489.p1, internal, 133509, 133618
-recovered pasa_asmbl_41489.p1, internal, 133875, 134018
Valid prediction for GeneMark_model.16131_t
Valid prediction for snap_scaffold_4-snap.1698-T1
Valid prediction for GlimmerHMM_glimmerT_9935-T1
Valid prediction for snap_scaffold_4-snap.1723-T1
Valid prediction for GlimmerHMM_glimmerT_9936-T1
Couldn't classify 61082, 61117
Sorry, prediction pasa_asmbl_41499.p1 fails validation.
(GCC)	 CT	61082-61117	GT	AGG
(CAC)	 AG	61264-61350	GT	TGG
(GAG)	 AG	61457-61637	GT	ATG
(CGC)	 AG	61896-62050	CT	GAC
-recovered pasa_asmbl_41499.p1, terminal, 61896, 62050
-recovered pasa_asmbl_41499.p1, internal, 61264, 61350
-recovered pasa_asmbl_41499.p1, internal, 61457, 61637
Valid prediction for GlimmerHMM_glimmerT_9950-T1
Valid prediction for Augustus_model.g6508.t1
Valid prediction for GeneMark_model.16168_t
Valid prediction for snap_scaffold_4-snap.1712-T1
Couldn't classify 40987, 41119
Sorry, prediction pasa_asmbl_41501.p1 fails validation.
(GTG)	 CT	40987-41119	GT	AAG
(AAA)	 AG	41224-41308	GT	AGG
(GAA)	 AG	41471-41591	GT	TGG
(AGA)	 AG	42343-42417	GT	AGG
(GGC)	 AG	42544-42621	GT	ATG
(ATC)	 AG	42749-42853	GT	AGG
(GAC)	 AG	42938-43009	GT	AGG
(GGA)	 AG	43477-43636	GT	CCG
(GGA)	 AG	44121-44276	GT	AGG
(AGA)	 AG	46165-46333	GT	AGG
(AGA)	 AG	46663-46809	GT	CAG
(CTC)	 AG	47071-47194	GT	AGG
(GTC)	 AG	47463-47531	GT	AGG
(GTG)	 AG	47827-48001	GT	CGG
(GTC)	 AG	48145-48243	GT	AGG
(CGT)	 AG	48680-48828	AG	GAA
-recovered pasa_asmbl_41501.p1, terminal, 48680, 48828
-recovered pasa_asmbl_41501.p1, internal, 41224, 41308
-recovered pasa_asmbl_41501.p1, internal, 41471, 41591
-recovered pasa_asmbl_41501.p1, internal, 42343, 42417
-recovered pasa_asmbl_41501.p1, internal, 42544, 42621
-recovered pasa_asmbl_41501.p1, internal, 42749, 42853
-recovered pasa_asmbl_41501.p1, internal, 42938, 43009
-recovered pasa_asmbl_41501.p1, internal, 43477, 43636
-recovered pasa_asmbl_41501.p1, internal, 44121, 44276
-recovered pasa_asmbl_41501.p1, internal, 46165, 46333
-recovered pasa_asmbl_41501.p1, internal, 46663, 46809
-recovered pasa_asmbl_41501.p1, internal, 47071, 47194
-recovered pasa_asmbl_41501.p1, internal, 47463, 47531
-recovered pasa_asmbl_41501.p1, internal, 47827, 48001
-recovered pasa_asmbl_41501.p1, internal, 48145, 48243
Valid prediction for GlimmerHMM_glimmerT_9949-T1
Couldn't classify 55026, 55100
Couldn't classify 55994, 56113
Sorry, prediction pasa_asmbl_42406.p1 fails validation.
(GAG)	 AG	55026-55100	GT	TTG
(GAG)	 AG	55345-55392	GT	GGG
(GCC)	 AG	55487-55531	GT	AGG
(CTG)	 AG	55695-55793	GT	AGG
(ACG)	 AG	55994-56113	GT	AGG
-recovered pasa_asmbl_42406.p1, internal, 55026, 55100
-recovered pasa_asmbl_42406.p1, internal, 55345, 55392
-recovered pasa_asmbl_42406.p1, internal, 55487, 55531
-recovered pasa_asmbl_42406.p1, internal, 55695, 55793
-recovered pasa_asmbl_42406.p1, internal, 55994, 56113
Valid prediction for CodingQuarry_transcript_48964-T1
Valid prediction for Augustus_model.g6520.t1
Valid prediction for GeneMark_model.16157_t
Valid prediction for GeneMark_model.16156_t
Valid prediction for Augustus_model.g6519.t1
Valid prediction for GlimmerHMM_glimmerT_9941-T1
Valid prediction for GeneMark_model.16155_t
Valid prediction for GeneMark_model.16144_t
Valid prediction for GlimmerHMM_glimmerT_9946-T1
Couldn't classify 94894, 95141
Sorry, prediction pasa_asmbl_41490.p1 fails validation.
(CTG)	 GT	94894-95141	GT	ATG
(AGA)	 AG	95351-95396	GT	AGG
(CCG)	 AG	95543-95632	GT	AGG
(ATG)	 AG	95917-95994	GT	TGG
(AGA)	 AG	96251-96331	AG	GAA
-recovered pasa_asmbl_41490.p1, initial, 95917, 95994
-recovered pasa_asmbl_41490.p1, terminal, 96251, 96331
-recovered pasa_asmbl_41490.p1, internal, 95351, 95396
-recovered pasa_asmbl_41490.p1, internal, 95543, 95632
-recovered pasa_asmbl_41490.p1, internal, 95917, 95994
Valid prediction for GlimmerHMM_glimmerT_9932-T1
Valid prediction for GeneMark_model.16149_t
Valid prediction for GlimmerHMM_glimmerT_9933-T1
Valid prediction for snap_scaffold_4-snap.1711-T1
Valid prediction for GlimmerHMM_glimmerT_9955-T1
Valid prediction for snap_scaffold_4-snap.1709-T1
Valid prediction for Augustus_model.g6505.t1
Valid prediction for HiQ_model.g6514.t1
Valid prediction for pasa_asmbl_41506.p1
Valid prediction for GeneMark_model.16152_t
Valid prediction for GeneMark_model.16139_t
Valid prediction for GeneMark_model.16137_t
Valid prediction for snap_scaffold_4-snap.1722-T1
Valid prediction for Augustus_model.g6509.t1
Valid prediction for snap_scaffold_4-snap.1732-T1
Valid prediction for snap_scaffold_4-snap.1707-T1
Valid prediction for GeneMark_model.16160_t
Couldn't classify 156683, 156768
Couldn't classify 162314, 162376
Sorry, prediction pasa_asmbl_41484.p1 fails validation.
(GAG)	 TG	156683-156768	GT	AGG
(AGG)	 AG	157557-157674	GT	AGG
(GTG)	 AG	158026-158096	GT	GCG
(CAA)	 AG	160259-160334	GT	AGG
(TAC)	 AG	162314-162376	GT	AGG
-recovered pasa_asmbl_41484.p1, internal, 157557, 157674
-recovered pasa_asmbl_41484.p1, internal, 158026, 158096
-recovered pasa_asmbl_41484.p1, internal, 160259, 160334
-recovered pasa_asmbl_41484.p1, internal, 162314, 162376
Valid prediction for Augustus_model.g6512.t1
Valid prediction for snap_scaffold_4-snap.1714-T1
Couldn't classify 53030, 53058
Couldn't classify 54489, 54568
Sorry, prediction pasa_asmbl_41500.p1 fails validation.
(GGT)	 GA	53030-53058	GT	TGG
(GCC)	 AG	53637-53848	GT	CAG
(CAA)	 AG	54125-54232	GT	GGG
(ACG)	 AG	54489-54568	AG	CCA
-recovered pasa_asmbl_41500.p1, internal, 53637, 53848
-recovered pasa_asmbl_41500.p1, internal, 54125, 54232
Couldn't classify 137930, 138047
Sorry, prediction pasa_asmbl_41488.p1 fails validation.
(GTG)	 CA	137930-138047	GT	CAG
(ATG)	 AG	138190-138248	GT	AGG
(GAC)	 AG	138349-138390	GT	AGG
(GAG)	 AG	138534-138584	GT	AGG
(GCT)	 AG	138948-139325	GT	AGG
(GCT)	 AG	139641-139809	GT	AGG
(ATC)	 AG	140747-140829	CG	AAC
-recovered pasa_asmbl_41488.p1, initial, 138190, 138248
-recovered pasa_asmbl_41488.p1, terminal, 140747, 140829
-recovered pasa_asmbl_41488.p1, internal, 138190, 138248
-recovered pasa_asmbl_41488.p1, internal, 138349, 138390
-recovered pasa_asmbl_41488.p1, internal, 138534, 138584
-recovered pasa_asmbl_41488.p1, internal, 138948, 139325
-recovered pasa_asmbl_41488.p1, internal, 139641, 139809
Valid prediction for GeneMark_model.16150_t
Valid prediction for GlimmerHMM_glimmerT_9947-T1
Valid prediction for GeneMark_model.16129_t
Valid prediction for CodingQuarry_transcript_48961-T1
Valid prediction for GlimmerHMM_glimmerT_9948-T1
Valid prediction for snap_scaffold_4-snap.1734-T1
Valid prediction for GlimmerHMM_glimmerT_9938-T1
Valid prediction for snap_scaffold_4-snap.1716-T1
Valid prediction for HiQ_model.g6515.t1
Valid prediction for Augustus_model.g6516.t1
Valid prediction for snap_scaffold_4-snap.1706-T1
Valid prediction for Augustus_model.g6517.t1
Valid prediction for Augustus_model.g6506.t1
Valid prediction for snap_scaffold_4-snap.1704-T1
Valid prediction for Augustus_model.g6511.t1
Valid prediction for snap_scaffold_4-snap.1727-T1
Valid prediction for GlimmerHMM_glimmerT_9945-T1
Couldn't classify 136159, 136351
Couldn't classify 136793, 136894
Sorry, prediction pasa_asmbl_42261.p1 fails validation.
(CTG)	 TG	136159-136351	GT	AGG
(ACG)	 AG	136556-136632	GT	TGG
(GAC)	 AG	136793-136894	GT	TGG
-recovered pasa_asmbl_42261.p1, internal, 136556, 136632
-recovered pasa_asmbl_42261.p1, internal, 136793, 136894
Valid prediction for CodingQuarry_transcript_48960-T1
Valid prediction for pasa_asmbl_41472.p1
Valid prediction for GeneMark_model.16161_t
Valid prediction for snap_scaffold_4-snap.1725-T1
Couldn't classify 76405, 76499
Sorry, prediction pasa_asmbl_41493.p1 fails validation.
(GAG)	 CG	76405-76499	GT	AGG
(CAC)	 AG	76830-77016	GT	AGG
(GTT)	 AG	77126-77275	GT	AGG
(ACT)	 AG	77404-77536	GT	AGG
(ACC)	 AG	77656-77737	GT	AGG
(GGC)	 AG	77847-78027	GT	CTG
(GAG)	 AG	78274-78519	GT	GGG
(GCG)	 AG	78631-78762	GT	AGG
(ACC)	 AG	79325-79408	AG	AGA
add_exon() Sorry, pasa_asmbl_41493.p1 77656-77737-terminal-3 is invalid.
-recovered pasa_asmbl_41493.p1, terminal, 77656, 77737
-recovered pasa_asmbl_41493.p1, terminal, 79325, 79408
-recovered pasa_asmbl_41493.p1, internal, 76830, 77016
-recovered pasa_asmbl_41493.p1, internal, 77126, 77275
-recovered pasa_asmbl_41493.p1, internal, 77404, 77536
-recovered pasa_asmbl_41493.p1, internal, 77656, 77737
-recovered pasa_asmbl_41493.p1, internal, 77847, 78027
-recovered pasa_asmbl_41493.p1, internal, 78274, 78519
-recovered pasa_asmbl_41493.p1, internal, 78631, 78762
Valid prediction for GlimmerHMM_glimmerT_9940-T1
Valid prediction for GeneMark_model.16142_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 28095, rend_intergenic: 23689  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38997, rend_intergenic: 36440  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48833, rend_intergenic: 47286  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49392, rend_intergenic: 48859  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54894, rend_intergenic: 49697  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59446, rend_intergenic: 55984  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68144, rend_intergenic: 64577  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81194, rend_intergenic: 78504  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94198, rend_intergenic: 87394  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127480, rend_intergenic: 119788  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145282, rend_intergenic: 135403  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 182538
-exon list size: 666


building trellis

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23.8    
24.0    
24.1    
24.3    
24.4    
24.6    
24.7    
24.9    
25.0    
25.1    
25.3    
25.4    
25.6    
25.7    
25.9    
26.0    
26.2    
26.3    
26.5    
26.6    
26.8    
26.9    
27.1    
27.2    
27.4    
27.5    
27.7    
27.8    
28.0    
28.1    
28.3    
28.4    
28.6    
28.7    
28.9    
29.0    
29.2    
29.3    
29.5    
29.6    
29.8    
29.9    
30.1    
30.2    
30.4    
30.5    
30.7    
30.8    
31.0    
31.1    
31.3    
31.4    
31.6    
31.7    
31.9    
32.0    
32.2    
32.3    
32.5    
32.6    
32.8    
32.9    
33.1    
33.2    
33.4    
33.5    
33.7    
33.8    
34.0    
34.1    
34.3    
34.4    
34.6    
34.7    
34.9    
35.0    
35.2    
35.3    
35.5    
35.6    
35.8    
35.9    
36.1    
36.2    
36.4    
36.5    
36.7    
36.8    
37.0    
37.1    
37.3    
37.4    
37.6    
37.7    
37.9    
38.0    
38.2    
38.3    
38.5    
38.6    
38.8    
38.9    
39.1    
39.2    
39.4    
39.5    
39.7    
39.8    
40.0    
40.1    
40.3    
40.4    
40.6    
40.7    
40.9    
41.0    
41.2    
41.3    
41.5    
41.6    
41.8    
41.9    
42.1    
42.2    
42.4    
42.5    
42.7    
42.8    
43.0    
43.1    
43.3    
43.4    
43.6    
43.7    
43.9    
44.0    
44.2    
44.3    
44.5    
44.6    
44.8    
44.9    
45.1    
45.2    
45.4    
45.5    
45.7    
45.8    
46.0    
46.1    
46.3    
46.4    
46.6    
46.7    
46.9    
47.0    
47.2    
47.3    
47.5    
47.6    
47.8    
47.9    
48.1    
48.2    
48.4    
48.5    
48.7    
48.8    
49.0    
49.1    
49.3    
49.4    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.6    
50.7    
50.9    
51.0    
51.2    
51.3    
51.5    
51.6    
51.8    
51.9    
52.1    
52.2    
52.4    
52.5    
52.7    
52.8    
53.0    
53.1    
53.3    
53.4    
53.6    
53.7    
53.9    
54.0    
54.2    
54.3    
54.5    
54.6    
54.8    
54.9    
55.1    
55.2    
55.4    
55.5    
55.7    
55.8    
56.0    
56.1    
56.3    
56.4    
56.6    
56.7    
56.9    
57.0    
57.2    
57.3    
57.5    
57.6    
57.8    
57.9    
58.1    
58.2    
58.4    
58.5    
58.7    
58.8    
59.0    
59.1    
59.3    
59.4    
59.6    
59.7    
59.9    
60.0    
60.2    
60.3    
60.5    
60.6    
60.8    
60.9    
61.1    
61.2    
61.4    
61.5    
61.7    
61.8    
62.0    
62.1    
62.3    
62.4    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.8    
63.9    
64.1    
64.2    
64.4    
64.5    
64.7    
64.8    
65.0    
65.1    
65.3    
65.4    
65.6    
65.7    
65.9    
66.0    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.1    
67.2    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.9    
69.0    
69.2    
69.3    
69.5    
69.6    
69.8    
69.9    
70.1    
70.2    
70.4    
70.5    
70.7    
70.8    
71.0    
71.1    
71.3    
71.4    
71.6    
71.7    
71.9    
72.0    
72.2    
72.3    
72.5    
72.6    
72.8    
72.9    
73.1    
73.2    
73.4    
73.5    
73.7    
73.8    
74.0    
74.1    
74.3    
74.4    
74.6    
74.7    
74.9    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.9    
76.0    
76.2    
76.3    
76.5    
76.6    
76.8    
76.9    
77.1    
77.2    
77.4    
77.5    
77.7    
77.8    
78.0    
78.1    
78.3    
78.4    
78.6    
78.7    
78.9    
79.0    
79.2    
79.3    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.4    
80.5    
80.7    
80.8    
81.0    
81.1    
81.3    
81.4    
81.6    
81.7    
81.9    
82.0    
82.2    
82.3    
82.5    
82.6    
82.8    
82.9    
83.1    
83.2    
83.4    
83.5    
83.7    
83.8    
84.0    
84.1    
84.3    
84.4    
84.6    
84.7    
84.9    
85.0    
85.2    
85.3    
85.5    
85.6    
85.8    
85.9    
86.1    
86.2    
86.4    
86.5    
86.7    
86.8    
87.0    
87.1    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.2    
88.3    
88.5    
88.6    
88.8    
88.9    
89.1    
89.2    
89.4    
89.5    
89.7    
89.8    
90.0    
90.1    
90.3    
90.4    
90.6    
90.7    
90.9    
91.0    
91.2    
91.3    
91.5    
91.6    
91.8    
91.9    
92.1    
92.2    
92.4    
92.5    
92.7    
92.8    
93.0    
93.1    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.2    
94.3    
94.5    
94.6    
94.8    
94.9    
95.1    
95.2    
95.4    
95.5    
95.7    
95.8    
96.0    
96.1    
96.3    
96.4    
96.6    
96.7    
96.9    
97.0    
97.2    
97.3    
97.5    
97.6    
97.8    
97.9    
98.1    
98.2    
98.4    
98.5    
98.7    
98.8    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 29 predictions from path traversal
Error with prediction: snap lend_intergenic: 28095, rend_intergenic: 23689  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 38997, rend_intergenic: 36440  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48833, rend_intergenic: 47286  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 49392, rend_intergenic: 48859  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54894, rend_intergenic: 49697  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59446, rend_intergenic: 55984  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68144, rend_intergenic: 64577  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81194, rend_intergenic: 78504  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94198, rend_intergenic: 87394  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127480, rend_intergenic: 119788  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 145282, rend_intergenic: 135403  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 23 predictions persist after filtering for low support