-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_4/scaffold_4_19329454-19630795 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_4-snap.3998-T1 Valid prediction for GeneMark_model.19092_t Couldn't classify 113381, 113539 Couldn't classify 119810, 119898 Sorry, prediction pasa_asmbl_43492.p1 fails validation. (CAG) TG 113381-113539 GT AGG (GAG) AG 113773-114008 GT CAG (GGG) AG 114208-114460 GT AGG (GAC) AG 115165-115382 GT GGG (GGC) AG 115497-115629 GT TGG (GGC) AG 115868-116092 GT CGG (AAG) AG 116589-116743 GT AGG (GAC) AG 117155-117251 GT CAG (GTG) AG 117758-117924 GT AGG (TGG) AG 118733-119103 GT TGG (GTA) AG 119432-119581 GT AGG (GTG) AG 119810-119898 GG GCG -recovered pasa_asmbl_43492.p1, internal, 113773, 114008 -recovered pasa_asmbl_43492.p1, internal, 114208, 114460 -recovered pasa_asmbl_43492.p1, internal, 115165, 115382 -recovered pasa_asmbl_43492.p1, internal, 115497, 115629 -recovered pasa_asmbl_43492.p1, internal, 115868, 116092 -recovered pasa_asmbl_43492.p1, internal, 116589, 116743 -recovered pasa_asmbl_43492.p1, internal, 117155, 117251 -recovered pasa_asmbl_43492.p1, internal, 117758, 117924 -recovered pasa_asmbl_43492.p1, internal, 118733, 119103 -recovered pasa_asmbl_43492.p1, internal, 119432, 119581 Valid prediction for GeneMark_model.19105_t Valid prediction for Augustus_model.g7590.t1 Valid prediction for GlimmerHMM_glimmerT_11531-T1 Valid prediction for Augustus_model.g7598.t1 Valid prediction for snap_scaffold_4-snap.4028-T1 Valid prediction for snap_scaffold_4-snap.3984-T1 Valid prediction for snap_scaffold_4-snap.3988-T1 Valid prediction for snap_scaffold_4-snap.3999-T1 Valid prediction for snap_scaffold_4-snap.3996-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for GlimmerHMM_glimmerT_11509-T1 Valid prediction for GeneMark_model.19094_t Valid prediction for snap_scaffold_4-snap.3994-T1 Valid prediction for GeneMark_model.19107_t Valid prediction for snap_scaffold_4-snap.4001-T1 Valid prediction for GlimmerHMM_glimmerT_11521-T1 Valid prediction for GlimmerHMM_glimmerT_11515-T1 Valid prediction for GeneMark_model.19125_t Valid prediction for Augustus_model.g7595.t1 Valid prediction for pasa_asmbl_43497.p1 Valid prediction for pasa_asmbl_43499.p1 Couldn't classify 65050, 65072 Sorry, prediction pasa_asmbl_43486.p2 fails validation. (ATG) CT 63107-63262 GT AGG (GGG) AG 63501-63670 GT AGG (TGG) AG 64655-64764 GT GGG (CTG) AG 65050-65072 CA CAC -recovered pasa_asmbl_43486.p2, initial, 63107, 63262 -recovered pasa_asmbl_43486.p2, internal, 63501, 63670 -recovered pasa_asmbl_43486.p2, internal, 64655, 64764 Valid prediction for snap_scaffold_4-snap.4006-T1 Valid prediction for Augustus_model.g7599.t1 Valid prediction for GeneMark_model.19130_t Valid prediction for GlimmerHMM_glimmerT_11526-T1 Valid prediction for GeneMark_model.19096_t Valid prediction for snap_scaffold_4-snap.4013-T1 Valid prediction for GeneMark_model.19104_t Valid prediction for snap_scaffold_4-snap.4020-T1 Valid prediction for Augustus_model.g7602.t1 Valid prediction for snap_scaffold_4-snap.4022-T1 Valid prediction for GeneMark_model.19115_t Valid prediction for snap_scaffold_4-snap.4029-T1 Valid prediction for GeneMark_model.19111_t Valid prediction for GlimmerHMM_glimmerT_11500-T1 Valid prediction for GlimmerHMM_glimmerT_11498-T1 Valid prediction for GeneMark_model.19068_t Valid prediction for snap_scaffold_4-snap.3977-T1 Valid prediction for GlimmerHMM_glimmerT_11532-T1 Valid prediction for snap_scaffold_4-snap.3973-T1 Couldn't classify 108241, 108393 Couldn't classify 109867, 110137 Sorry, prediction pasa_asmbl_43490.p1 fails validation. (GCT) GA 108241-108393 GT AGG (CGT) AG 108482-108619 GT AGG (GAG) AG 109352-109578 GT AGG (GTA) AG 109867-110137 CT GTC -recovered pasa_asmbl_43490.p1, internal, 108482, 108619 -recovered pasa_asmbl_43490.p1, internal, 109352, 109578 Valid prediction for GlimmerHMM_glimmerT_11520-T1 Valid prediction for snap_scaffold_4-snap.4018-T1 Valid prediction for GlimmerHMM_glimmerT_11516-T1 Valid prediction for GlimmerHMM_glimmerT_11522-T1 Valid prediction for GeneMark_model.19100_t Valid prediction for GeneMark_model.19073_t Valid prediction for GlimmerHMM_glimmerT_11505-T1 Valid prediction for GeneMark_model.19077_t Valid prediction for snap_scaffold_4-snap.4027-T1 Valid prediction for snap_scaffold_4-snap.3980-T1 Valid prediction for snap_scaffold_4-snap.4026-T1 Valid prediction for Augustus_model.g7601.t1 Valid prediction for GeneMark_model.19112_t Valid prediction for snap_scaffold_4-snap.4009-T1 Valid prediction for GeneMark_model.19065_t Valid prediction for GlimmerHMM_glimmerT_11503-T1 Valid prediction for GeneMark_model.19066_t Valid prediction for GlimmerHMM_glimmerT_11514-T1 Couldn't classify 146524, 146725 Couldn't classify 147628, 147756 Sorry, prediction pasa_asmbl_43495.p1 fails validation. (GGG) CT 146524-146725 GT AGG (ACA) AG 146879-146955 GT AGG (GAT) AG 147628-147756 CC GCC -recovered pasa_asmbl_43495.p1, internal, 146879, 146955 Valid prediction for GeneMark_model.19123_t Valid prediction for snap_scaffold_4-snap.4010-T1 Valid prediction for snap_scaffold_4-snap.4014-T1 Valid prediction for GeneMark_model.19127_t Valid prediction for GeneMark_model.19103_t Valid prediction for Augustus_model.g7592.t1 Valid prediction for GeneMark_model.19075_t Valid prediction for snap_scaffold_4-snap.3982-T1 Couldn't classify 105912, 106131 Couldn't classify 107690, 108036 Sorry, prediction pasa_asmbl_43489.p1 fails validation. (GCG) TG 105912-106131 GT GGG (GTG) AG 107690-108036 TT GGT Valid prediction for GeneMark_model.19081_t Valid prediction for GeneMark_model.19093_t Couldn't classify 110356, 110393 Couldn't classify 112779, 113164 Sorry, prediction pasa_asmbl_43491.p1 fails validation. (ATA) TG 110356-110393 GT GGG (TGA) AG 111548-111702 GT GGG (AGC) AG 111855-111937 GT AGG (AAC) AG 112154-112247 GT GGG (GGC) AG 112779-113164 CA AGC -recovered pasa_asmbl_43491.p1, internal, 111548, 111702 -recovered pasa_asmbl_43491.p1, internal, 111855, 111937 -recovered pasa_asmbl_43491.p1, internal, 112154, 112247 Valid prediction for GeneMark_model.19134_t Valid prediction for CodingQuarry_transcript_49298-T1 Valid prediction for GeneMark_model.19132_t Valid prediction for GlimmerHMM_glimmerT_11510-T1 Valid prediction for GeneMark_model.19121_t Valid prediction for GeneMark_model.19114_t Valid prediction for CodingQuarry_transcript_49300-T1 Valid prediction for snap_scaffold_4-snap.3990-T1 Valid prediction for GlimmerHMM_glimmerT_11511-T1 Valid prediction for GeneMark_model.19117_t Valid prediction for GlimmerHMM_glimmerT_11517-T1 Valid prediction for snap_scaffold_4-snap.4008-T1 Valid prediction for GeneMark_model.19083_t Valid prediction for snap_scaffold_4-snap.3987-T1 Couldn't classify 36781, 36870 Sorry, prediction pasa_asmbl_43480.p1 fails validation. (ATG) AC 33083-33151 GT GCG (AAG) AG 33740-33865 GT CTG (AGG) AG 34135-34177 GT AGG (GTC) AG 34538-34619 GT AGG (ACA) AG 34888-34932 GT CGG (GTT) AG 35183-35235 GT ATG (CGG) AG 35342-35459 GT AGG (GGG) AG 36279-36366 GT TGG (GAT) AG 36781-36870 TG GGT -recovered pasa_asmbl_43480.p1, initial, 33083, 33151 -recovered pasa_asmbl_43480.p1, internal, 33740, 33865 -recovered pasa_asmbl_43480.p1, internal, 34135, 34177 -recovered pasa_asmbl_43480.p1, internal, 34538, 34619 -recovered pasa_asmbl_43480.p1, internal, 34888, 34932 -recovered pasa_asmbl_43480.p1, internal, 35183, 35235 -recovered pasa_asmbl_43480.p1, internal, 35342, 35459 -recovered pasa_asmbl_43480.p1, internal, 36279, 36366 Valid prediction for GlimmerHMM_glimmerT_11528-T1 Valid prediction for GlimmerHMM_glimmerT_11507-T1 Valid prediction for Augustus_model.g7596.t1 Valid prediction for GeneMark_model.19109_t Couldn't classify 99098, 99424 Sorry, prediction pasa_asmbl_43541.p1 fails validation. (GGT) CA 99098-99424 GC CTG Valid prediction for CodingQuarry_transcript_49293-T1 Valid prediction for GeneMark_model.19101_t Valid prediction for GlimmerHMM_glimmerT_11502-T1 Valid prediction for Augustus_model.g7600.t1 Valid prediction for GeneMark_model.19129_t Valid prediction for CodingQuarry_transcript_49301-T1 Valid prediction for snap_scaffold_4-snap.4016-T1 Valid prediction for GeneMark_model.19088_t Valid prediction for snap_scaffold_4-snap.4023-T1 Valid prediction for snap_scaffold_4-snap.4030-T1 Valid prediction for GeneMark_model.19070_t Valid prediction for Augustus_model.g7593.t1 Valid prediction for GeneMark_model.19131_t Valid prediction for CodingQuarry_transcript_49294-T1 Couldn't classify 37443, 37459 Sorry, prediction pasa_asmbl_43481.p1 fails validation. (CAC) GC 37443-37459 GT AGG (TGG) AG 37770-37892 GT TGG (GCG) AG 37994-38155 GT AGG (ACT) AG 39647-39731 GT AGG (AGT) AG 40290-40367 GT AGG (GGT) AG 40686-40742 GT CAG (GCA) AG 41285-41441 GT AGG (CTC) AG 41785-41966 GT AGG (AAT) AG 42301-42391 GT TTG (ATG) AG 42576-42637 GT CGG (GTG) AG 44794-44940 GT GGG (ACC) AG 46554-46682 GT AGG (CGT) AG 48935-49080 GT AGG (CGC) AG 49207-49342 GT CGG (TGT) AG 49446-49520 CA AGC add_exon() Sorry, pasa_asmbl_43481.p1 42576-42637-initial-1 is invalid. -recovered pasa_asmbl_43481.p1, initial, 42576, 42637 -recovered pasa_asmbl_43481.p1, terminal, 49446, 49520 -recovered pasa_asmbl_43481.p1, internal, 37770, 37892 -recovered pasa_asmbl_43481.p1, internal, 37994, 38155 -recovered pasa_asmbl_43481.p1, internal, 39647, 39731 -recovered pasa_asmbl_43481.p1, internal, 40290, 40367 -recovered pasa_asmbl_43481.p1, internal, 40686, 40742 -recovered pasa_asmbl_43481.p1, internal, 41285, 41441 -recovered pasa_asmbl_43481.p1, internal, 41785, 41966 -recovered pasa_asmbl_43481.p1, internal, 42301, 42391 -recovered pasa_asmbl_43481.p1, internal, 42576, 42637 -recovered pasa_asmbl_43481.p1, internal, 44794, 44940 -recovered pasa_asmbl_43481.p1, internal, 46554, 46682 -recovered pasa_asmbl_43481.p1, internal, 48935, 49080 -recovered pasa_asmbl_43481.p1, internal, 49207, 49342 Valid prediction for GlimmerHMM_glimmerT_11504-T1 Valid prediction for GlimmerHMM_glimmerT_11519-T1 Valid prediction for GeneMark_model.19086_t Valid prediction for snap_scaffold_4-snap.3976-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 293622, 294320 Sorry, prediction pasa_asmbl_42179.p1 fails validation. (ATG) GG 293622-294320 TC GGT Couldn't classify 78922, 79102 Sorry, prediction GeneMark_model.19118_t fails validation. (GAG) AG 78922-79102 GT GGG (AAC) AG 79326-79356 GT GGG (TGT) AG 79415-79430 GT TGG (GAG) AG 81111-81282 GT TGG (CGC) AG 82094-82249 GT AGG (GTG) AG 82380-82501 GT AGG (GAC) AG 82783-82890 GT AGG (GGC) AG 83164-83270 GT AGG (ATG) AG 83299-83356 GC AGG (CCC) AG 85586-85738 GT ACG (CAG) AG 86106-86213 CT AGC -recovered GeneMark_model.19118_t, initial, 83299, 83356 -recovered GeneMark_model.19118_t, terminal, 86106, 86213 -recovered GeneMark_model.19118_t, internal, 78922, 79102 -recovered GeneMark_model.19118_t, internal, 79326, 79356 -recovered GeneMark_model.19118_t, internal, 79415, 79430 -recovered GeneMark_model.19118_t, internal, 81111, 81282 -recovered GeneMark_model.19118_t, internal, 82094, 82249 -recovered GeneMark_model.19118_t, internal, 82380, 82501 -recovered GeneMark_model.19118_t, internal, 82783, 82890 -recovered GeneMark_model.19118_t, internal, 83164, 83270 -recovered GeneMark_model.19118_t, internal, 83299, 83356 -recovered GeneMark_model.19118_t, internal, 85586, 85738 Valid prediction for GlimmerHMM_glimmerT_11513-T1 Valid prediction for snap_scaffold_4-snap.3978-T1 Valid prediction for GeneMark_model.19079_t Valid prediction for GlimmerHMM_glimmerT_11529-T1 Valid prediction for GeneMark_model.19078_t Valid prediction for GeneMark_model.19080_t Valid prediction for GlimmerHMM_glimmerT_11508-T1 Valid prediction for snap_scaffold_4-snap.3975-T1 Valid prediction for GeneMark_model.19126_t Couldn't classify 87834, 87963 Sorry, prediction pasa_asmbl_42200.p2 fails validation. (CTG) GC 87834-87963 GT TGG (GAA) AG 89841-89927 GT GCG (TAA) AG 90677-90792 GG GAG -recovered pasa_asmbl_42200.p2, terminal, 90677, 90792 -recovered pasa_asmbl_42200.p2, internal, 89841, 89927 Valid prediction for GeneMark_model.19124_t Valid prediction for snap_scaffold_4-snap.4005-T1 Valid prediction for Augustus_model.g7594.t1 Valid prediction for pasa_asmbl_42362.p1 Valid prediction for GeneMark_model.19089_t Valid prediction for GeneMark_model.19090_t Valid prediction for GlimmerHMM_glimmerT_11523-T1 Valid prediction for GeneMark_model.19135_t Valid prediction for Augustus_model.g7588.t1 Couldn't classify 280586, 280611 Couldn't classify 282763, 282927 Sorry, prediction pasa_asmbl_42184.p1 fails validation. (CTA) CT 280586-280611 GT AGG (TTC) AG 282321-282459 GT AGG (TTT) AG 282763-282927 GT CTG -recovered pasa_asmbl_42184.p1, internal, 282321, 282459 -recovered pasa_asmbl_42184.p1, internal, 282763, 282927 Valid prediction for snap_scaffold_4-snap.4025-T1 Valid prediction for GeneMark_model.19097_t Valid prediction for GlimmerHMM_glimmerT_11518-T1 Valid prediction for GeneMark_model.19136_t Valid prediction for GeneMark_model.19076_t Valid prediction for GlimmerHMM_glimmerT_11501-T1 Valid prediction for GeneMark_model.19069_t Valid prediction for snap_scaffold_4-snap.4003-T1 Valid prediction for GeneMark_model.19087_t Valid prediction for snap_scaffold_4-snap.3985-T1 Valid prediction for GeneMark_model.19099_t Valid prediction for GlimmerHMM_glimmerT_11525-T1 Valid prediction for Augustus_model.g7589.t1 Valid prediction for CodingQuarry_transcript_49302-T1 Valid prediction for CodingQuarry_transcript_49291-T1 Valid prediction for GeneMark_model.19091_t Couldn't classify 71507, 71562 Sorry, prediction GeneMark_model.19119_t fails validation. (ATG) GT 69450-69475 GT GGG (CGG) AG 69693-69773 GT GGG (GGG) AG 70032-70081 GT GGG (TGT) AG 70180-70326 GT GGG (GAG) AG 70377-70449 GT CCG (CGC) AG 70490-70546 GT CTG (GCA) AG 70575-70609 GT GGG (GCG) AG 71507-71562 GT GGG -recovered GeneMark_model.19119_t, initial, 69450, 69475 -recovered GeneMark_model.19119_t, internal, 69693, 69773 -recovered GeneMark_model.19119_t, internal, 70032, 70081 -recovered GeneMark_model.19119_t, internal, 70180, 70326 -recovered GeneMark_model.19119_t, internal, 70377, 70449 -recovered GeneMark_model.19119_t, internal, 70490, 70546 -recovered GeneMark_model.19119_t, internal, 70575, 70609 -recovered GeneMark_model.19119_t, internal, 71507, 71562 Valid prediction for snap_scaffold_4-snap.3981-T1 Valid prediction for GeneMark_model.19113_t Valid prediction for GlimmerHMM_glimmerT_11530-T1 Valid prediction for GeneMark_model.19133_t Valid prediction for snap_scaffold_4-snap.3991-T1 Valid prediction for GeneMark_model.19074_t Valid prediction for GlimmerHMM_glimmerT_11524-T1 Valid prediction for GeneMark_model.19116_t Valid prediction for pasa_asmbl_42196.p1 Valid prediction for GeneMark_model.19120_t Valid prediction for CodingQuarry_transcript_49297-T1 Valid prediction for snap_scaffold_4-snap.3983-T1 Valid prediction for GlimmerHMM_glimmerT_11512-T1 Valid prediction for snap_scaffold_4-snap.4012-T1 Valid prediction for GlimmerHMM_glimmerT_11506-T1 Valid prediction for Augustus_model.g7597.t1 Valid prediction for GeneMark_model.19108_t Valid prediction for Augustus_model.g7587.t1 Valid prediction for snap_scaffold_4-snap.3997-T1 Valid prediction for snap_scaffold_4-snap.3974-T1 Valid prediction for GeneMark_model.19128_t Valid prediction for CodingQuarry_transcript_49296-T1 Valid prediction for CodingQuarry_transcript_49303-T1 Valid prediction for pasa_asmbl_42213.p3 Valid prediction for snap_scaffold_4-snap.4024-T1 Valid prediction for snap_scaffold_4-snap.4011-T1 Valid prediction for snap_scaffold_4-snap.3986-T1 Valid prediction for GeneMark_model.19110_t Valid prediction for GlimmerHMM_glimmerT_11535-T1 Valid prediction for CodingQuarry_transcript_49292-T1 Valid prediction for GeneMark_model.19063_t Valid prediction for snap_scaffold_4-snap.4015-T1 Valid prediction for snap_scaffold_4-snap.4007-T1 Valid prediction for GlimmerHMM_glimmerT_11533-T1 Valid prediction for snap_scaffold_4-snap.3989-T1 Valid prediction for CodingQuarry_transcript_49304-T1 Valid prediction for snap_scaffold_4-snap.4000-T1 Valid prediction for HiQ_model.g7591.t1 Valid prediction for snap_scaffold_4-snap.3992-T1 Valid prediction for GeneMark_model.19067_t Valid prediction for GeneMark_model.19071_t Valid prediction for GeneMark_model.19137_t Valid prediction for pasa_asmbl_42185.p1 Couldn't classify 81144, 81282 Couldn't classify 83164, 83268 Sorry, prediction pasa_asmbl_42203.p1 fails validation. (GTA) CA 81144-81282 GT TGG (CGC) AG 82094-82249 GT AGG (GTG) AG 82380-82501 GT AGG (GAC) AG 82783-82890 GT AGG (GGC) AG 83164-83268 AG AGA -recovered pasa_asmbl_42203.p1, internal, 82094, 82249 -recovered pasa_asmbl_42203.p1, internal, 82380, 82501 -recovered pasa_asmbl_42203.p1, internal, 82783, 82890 Valid prediction for GeneMark_model.19138_t Couldn't classify 122798, 122857 Sorry, prediction pasa_asmbl_42194.p1 fails validation. (AAG) AC 122798-122857 GT AGG (GTG) AG 124051-124335 GT AGG (GTT) AG 124636-124803 GT AGG (GCG) AG 124922-125133 GT AGG (TCC) AG 125507-125588 GT AGG (GTA) AG 125755-125849 GT CTG (GTA) AG 126034-126202 GT AGG (GAT) AG 127234-127452 GT TGG (GTA) AG 127529-127909 AC GAA -recovered pasa_asmbl_42194.p1, terminal, 127529, 127909 -recovered pasa_asmbl_42194.p1, internal, 124051, 124335 -recovered pasa_asmbl_42194.p1, internal, 124636, 124803 -recovered pasa_asmbl_42194.p1, internal, 124922, 125133 -recovered pasa_asmbl_42194.p1, internal, 125507, 125588 -recovered pasa_asmbl_42194.p1, internal, 125755, 125849 -recovered pasa_asmbl_42194.p1, internal, 126034, 126202 -recovered pasa_asmbl_42194.p1, internal, 127234, 127452 Valid prediction for GlimmerHMM_glimmerT_11499-T1 Valid prediction for pasa_asmbl_42206.p1 Valid prediction for snap_scaffold_4-snap.4017-T1 Valid prediction for snap_scaffold_4-snap.4019-T1 Valid prediction for GeneMark_model.19122_t Valid prediction for GeneMark_model.19085_t Valid prediction for snap_scaffold_4-snap.4021-T1 Valid prediction for snap_scaffold_4-snap.3972-T1 Couldn't classify 22446, 22620 Sorry, prediction pasa_asmbl_42223.p1 fails validation. (GTT) GT 22446-22620 GT AGG (TGG) AG 24211-24374 GT AGG (TTC) AG 25064-25267 TT GAT -recovered pasa_asmbl_42223.p1, terminal, 25064, 25267 -recovered pasa_asmbl_42223.p1, internal, 24211, 24374 Valid prediction for GlimmerHMM_glimmerT_11534-T1 Valid prediction for snap_scaffold_4-snap.3995-T1 Couldn't classify 283361, 283449 Couldn't classify 289169, 289217 Sorry, prediction pasa_asmbl_42182.p1 fails validation. (CGC) GC 283361-283449 GT AGG (GTC) AG 283629-283758 GT AGG (GAG) AG 283836-283887 GT GGG (TGA) AG 284127-284221 GT AGG (CAT) AG 284318-284422 GT AGG (ATC) AG 285641-285776 GT AGG (GTT) AG 286107-286198 GT CTG (TCG) AG 286403-286554 GT TGG (GTG) AG 286741-286817 GT TGG (AGT) AG 286982-287067 GT AGG (AGG) AG 287264-287374 GT AGG (ATC) AG 287684-287798 GT CGG (GCT) AG 288167-288266 GT ACG (GCA) AG 288766-289035 GT AGG (GAG) AG 289169-289217 CC AGC -recovered pasa_asmbl_42182.p1, internal, 283629, 283758 -recovered pasa_asmbl_42182.p1, internal, 283836, 283887 -recovered pasa_asmbl_42182.p1, internal, 284127, 284221 -recovered pasa_asmbl_42182.p1, internal, 284318, 284422 -recovered pasa_asmbl_42182.p1, internal, 285641, 285776 -recovered pasa_asmbl_42182.p1, internal, 286107, 286198 -recovered pasa_asmbl_42182.p1, internal, 286403, 286554 -recovered pasa_asmbl_42182.p1, internal, 286741, 286817 -recovered pasa_asmbl_42182.p1, internal, 286982, 287067 -recovered pasa_asmbl_42182.p1, internal, 287264, 287374 -recovered pasa_asmbl_42182.p1, internal, 287684, 287798 -recovered pasa_asmbl_42182.p1, internal, 288167, 288266 -recovered pasa_asmbl_42182.p1, internal, 288766, 289035 Valid prediction for snap_scaffold_4-snap.4004-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for GeneMark_model.19064_t Valid prediction for GeneMark_model.19095_t Valid prediction for GlimmerHMM_glimmerT_11497-T1 Valid prediction for GeneMark_model.19098_t Valid prediction for GeneMark_model.19072_t Valid prediction for GeneMark_model.19102_t Valid prediction for GlimmerHMM_glimmerT_11527-T1 Valid prediction for snap_scaffold_4-snap.3993-T1 Valid prediction for GeneMark_model.19106_t Valid prediction for GeneMark_model.19084_t Valid prediction for snap_scaffold_4-snap.4002-T1 Valid prediction for GeneMark_model.19082_t Valid prediction for snap_scaffold_4-snap.3979-T1 Couldn't classify 114477, 114608 Sorry, prediction Augustus_model.g7603.t1 fails validation. (TGC) GC 114477-114608 GT GGG (GGA) AG 114914-115034 GT AAG (CTT) AG 115119-115224 GT CAG (GTG) AG 115298-115354 GT ATG (GTG) AG 115438-115536 GT AGG (ACT) AG 116235-116333 GT AGG (GCC) AG 117613-117699 GT AGG (ACT) AG 117824-117923 GT GGG (GTT) AG 118017-118156 GT AGG (GTG) AG 119038-119178 GT AGG (GTG) AG 119498-119578 GT ATG (GTT) AG 119742-119858 GT CTG (GAG) AG 120444-120560 GT GGG (AGG) AG 120885-120992 GT ATG (GCC) AG 121103-121205 GT CGG (ATG) AG 121620-121762 GT TGG (ATC) AG 121905-121972 GT AGG (ATT) AG 122443-122541 GT ATG (GTC) AG 122770-122857 GT AGG (GTG) AG 124051-124335 GT AGG (GTT) AG 124636-124803 GT AGG (GCG) AG 124922-125133 GT AGG (TCC) AG 125507-125588 GT AGG (GTA) AG 125755-125849 GT CTG (GTA) AG 126034-126202 GT AGG (GAT) AG 127234-127452 GT TGG (GTA) AG 127529-127909 AC GAA -recovered Augustus_model.g7603.t1, initial, 121620, 121762 -recovered Augustus_model.g7603.t1, terminal, 127529, 127909 -recovered Augustus_model.g7603.t1, internal, 114914, 115034 -recovered Augustus_model.g7603.t1, internal, 115119, 115224 -recovered Augustus_model.g7603.t1, internal, 115298, 115354 -recovered Augustus_model.g7603.t1, internal, 115438, 115536 -recovered Augustus_model.g7603.t1, internal, 116235, 116333 -recovered Augustus_model.g7603.t1, internal, 117613, 117699 -recovered Augustus_model.g7603.t1, internal, 117824, 117923 -recovered Augustus_model.g7603.t1, internal, 118017, 118156 -recovered Augustus_model.g7603.t1, internal, 119038, 119178 -recovered Augustus_model.g7603.t1, internal, 119498, 119578 -recovered Augustus_model.g7603.t1, internal, 119742, 119858 -recovered Augustus_model.g7603.t1, internal, 120444, 120560 -recovered Augustus_model.g7603.t1, internal, 120885, 120992 -recovered Augustus_model.g7603.t1, internal, 121103, 121205 -recovered Augustus_model.g7603.t1, internal, 121620, 121762 -recovered Augustus_model.g7603.t1, internal, 121905, 121972 -recovered Augustus_model.g7603.t1, internal, 122443, 122541 -recovered Augustus_model.g7603.t1, internal, 122770, 122857 -recovered Augustus_model.g7603.t1, internal, 124051, 124335 -recovered Augustus_model.g7603.t1, internal, 124636, 124803 -recovered Augustus_model.g7603.t1, internal, 124922, 125133 -recovered Augustus_model.g7603.t1, internal, 125507, 125588 -recovered Augustus_model.g7603.t1, internal, 125755, 125849 -recovered Augustus_model.g7603.t1, internal, 126034, 126202 -recovered Augustus_model.g7603.t1, internal, 127234, 127452 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 10683, rend_intergenic: 9664 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18994, rend_intergenic: 12025 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 30743, rend_intergenic: 24695 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42563, rend_intergenic: 31687 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50122, rend_intergenic: 44365 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52066, rend_intergenic: 51056 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86473, rend_intergenic: 52405 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90750, rend_intergenic: 86483 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100748, rend_intergenic: 92323 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122049, rend_intergenic: 100865 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 132827, rend_intergenic: 130477 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 141827, rend_intergenic: 134246 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145428, rend_intergenic: 142038 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149055, rend_intergenic: 146421 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 162205, rend_intergenic: 150235 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177247, rend_intergenic: 173082 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190485, rend_intergenic: 180351 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207383, rend_intergenic: 198555 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209581, rend_intergenic: 208429 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 233240, rend_intergenic: 210139 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 236078, rend_intergenic: 233372 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 237412, rend_intergenic: 236209 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 249637, rend_intergenic: 240868 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 258088, rend_intergenic: 250551 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 263496, rend_intergenic: 259486 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 279186, rend_intergenic: 264050 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 301342 -exon list size: 1264 building trellis 0.1 0.2 0.2 0.3 0.4 0.5 0.6 0.6 0.7 0.8 0.9 0.9 1.0 1.1 1.2 1.3 1.3 1.4 1.5 1.6 1.7 1.7 1.8 1.9 2.0 2.1 2.1 2.2 2.3 2.4 2.4 2.5 2.6 2.7 2.8 2.8 2.9 3.0 3.1 3.2 3.2 3.3 3.4 3.5 3.6 3.6 3.7 3.8 3.9 3.9 4.0 4.1 4.2 4.3 4.3 4.4 4.5 4.6 4.7 4.7 4.8 4.9 5.0 5.1 5.1 5.2 5.3 5.4 5.5 5.5 5.6 5.7 5.8 5.8 5.9 6.0 6.1 6.2 6.2 6.3 6.4 6.5 6.6 6.6 6.7 6.8 6.9 7.0 7.0 7.1 7.2 7.3 7.3 7.4 7.5 7.6 7.7 7.7 7.8 7.9 8.0 8.1 8.1 8.2 8.3 8.4 8.5 8.5 8.6 8.7 8.8 8.8 8.9 9.0 9.1 9.2 9.2 9.3 9.4 9.5 9.6 9.6 9.7 9.8 9.9 10.0 10.0 10.1 10.2 10.3 10.3 10.4 10.5 10.6 10.7 10.7 10.8 10.9 11.0 11.1 11.1 11.2 11.3 11.4 11.5 11.5 11.6 11.7 11.8 11.8 11.9 12.0 12.1 12.2 12.2 12.3 12.4 12.5 12.6 12.6 12.7 12.8 12.9 13.0 13.0 13.1 13.2 13.3 13.3 13.4 13.5 13.6 13.7 13.7 13.8 13.9 14.0 14.1 14.1 14.2 14.3 14.4 14.5 14.5 14.6 14.7 14.8 14.8 14.9 15.0 15.1 15.2 15.2 15.3 15.4 15.5 15.6 15.6 15.7 15.8 15.9 16.0 16.0 16.1 16.2 16.3 16.4 16.4 16.5 16.6 16.7 16.7 16.8 16.9 17.0 17.1 17.1 17.2 17.3 17.4 17.5 17.5 17.6 17.7 17.8 17.9 17.9 18.0 18.1 18.2 18.2 18.3 18.4 18.5 18.6 18.6 18.7 18.8 18.9 19.0 19.0 19.1 19.2 19.3 19.4 19.4 19.5 19.6 19.7 19.7 19.8 19.9 20.0 20.1 20.1 20.2 20.3 20.4 20.5 20.5 20.6 20.7 20.8 20.9 20.9 21.0 21.1 21.2 21.2 21.3 21.4 21.5 21.6 21.6 21.7 21.8 21.9 22.0 22.0 22.1 22.2 22.3 22.4 22.4 22.5 22.6 22.7 22.7 22.8 22.9 23.0 23.1 23.1 23.2 23.3 23.4 23.5 23.5 23.6 23.7 23.8 23.9 23.9 24.0 24.1 24.2 24.2 24.3 24.4 24.5 24.6 24.6 24.7 24.8 24.9 25.0 25.0 25.1 25.2 25.3 25.4 25.4 25.5 25.6 25.7 25.8 25.8 25.9 26.0 26.1 26.1 26.2 26.3 26.4 26.5 26.5 26.6 26.7 26.8 26.9 26.9 27.0 27.1 27.2 27.3 27.3 27.4 27.5 27.6 27.6 27.7 27.8 27.9 28.0 28.0 28.1 28.2 28.3 28.4 28.4 28.5 28.6 28.7 28.8 28.8 28.9 29.0 29.1 29.1 29.2 29.3 29.4 29.5 29.5 29.6 29.7 29.8 29.9 29.9 30.0 30.1 30.2 30.3 30.3 30.4 30.5 30.6 30.6 30.7 30.8 30.9 31.0 31.0 31.1 31.2 31.3 31.4 31.4 31.5 31.6 31.7 31.8 31.8 31.9 32.0 32.1 32.1 32.2 32.3 32.4 32.5 32.5 32.6 32.7 32.8 32.9 32.9 33.0 33.1 33.2 33.3 33.3 33.4 33.5 33.6 33.6 33.7 33.8 33.9 34.0 34.0 34.1 34.2 34.3 34.4 34.4 34.5 34.6 34.7 34.8 34.8 34.9 35.0 35.1 35.2 35.2 35.3 35.4 35.5 35.5 35.6 35.7 35.8 35.9 35.9 36.0 36.1 36.2 36.3 36.3 36.4 36.5 36.6 36.7 36.7 36.8 36.9 37.0 37.0 37.1 37.2 37.3 37.4 37.4 37.5 37.6 37.7 37.8 37.8 37.9 38.0 38.1 38.2 38.2 38.3 38.4 38.5 38.5 38.6 38.7 38.8 38.9 38.9 39.0 39.1 39.2 39.3 39.3 39.4 39.5 39.6 39.7 39.7 39.8 39.9 40.0 40.0 40.1 40.2 40.3 40.4 40.4 40.5 40.6 40.7 40.8 40.8 40.9 41.0 41.1 41.2 41.2 41.3 41.4 41.5 41.5 41.6 41.7 41.8 41.9 41.9 42.0 42.1 42.2 42.3 42.3 42.4 42.5 42.6 42.7 42.7 42.8 42.9 43.0 43.0 43.1 43.2 43.3 43.4 43.4 43.5 43.6 43.7 43.8 43.8 43.9 44.0 44.1 44.2 44.2 44.3 44.4 44.5 44.5 44.6 44.7 44.8 44.9 44.9 45.0 45.1 45.2 45.3 45.3 45.4 45.5 45.6 45.7 45.7 45.8 45.9 46.0 46.1 46.1 46.2 46.3 46.4 46.4 46.5 46.6 46.7 46.8 46.8 46.9 47.0 47.1 47.2 47.2 47.3 47.4 47.5 47.6 47.6 47.7 47.8 47.9 47.9 48.0 48.1 48.2 48.3 48.3 48.4 48.5 48.6 48.7 48.7 48.8 48.9 49.0 49.1 49.1 49.2 49.3 49.4 49.4 49.5 49.6 49.7 49.8 49.8 49.9 50.0 50.1 50.2 50.2 50.3 50.4 50.5 50.6 50.6 50.7 50.8 50.9 50.9 51.0 51.1 51.2 51.3 51.3 51.4 51.5 51.6 51.7 51.7 51.8 51.9 52.0 52.1 52.1 52.2 52.3 52.4 52.4 52.5 52.6 52.7 52.8 52.8 52.9 53.0 53.1 53.2 53.2 53.3 53.4 53.5 53.6 53.6 53.7 53.8 53.9 53.9 54.0 54.1 54.2 54.3 54.3 54.4 54.5 54.6 54.7 54.7 54.8 54.9 55.0 55.1 55.1 55.2 55.3 55.4 55.5 55.5 55.6 55.7 55.8 55.8 55.9 56.0 56.1 56.2 56.2 56.3 56.4 56.5 56.6 56.6 56.7 56.8 56.9 57.0 57.0 57.1 57.2 57.3 57.3 57.4 57.5 57.6 57.7 57.7 57.8 57.9 58.0 58.1 58.1 58.2 58.3 58.4 58.5 58.5 58.6 58.7 58.8 58.8 58.9 59.0 59.1 59.2 59.2 59.3 59.4 59.5 59.6 59.6 59.7 59.8 59.9 60.0 60.0 60.1 60.2 60.3 60.3 60.4 60.5 60.6 60.7 60.7 60.8 60.9 61.0 61.1 61.1 61.2 61.3 61.4 61.5 61.5 61.6 61.7 61.8 61.8 61.9 62.0 62.1 62.2 62.2 62.3 62.4 62.5 62.6 62.6 62.7 62.8 62.9 63.0 63.0 63.1 63.2 63.3 63.3 63.4 63.5 63.6 63.7 63.7 63.8 63.9 64.0 64.1 64.1 64.2 64.3 64.4 64.5 64.5 64.6 64.7 64.8 64.8 64.9 65.0 65.1 65.2 65.2 65.3 65.4 65.5 65.6 65.6 65.7 65.8 65.9 66.0 66.0 66.1 66.2 66.3 66.4 66.4 66.5 66.6 66.7 66.7 66.8 66.9 67.0 67.1 67.1 67.2 67.3 67.4 67.5 67.5 67.6 67.7 67.8 67.9 67.9 68.0 68.1 68.2 68.2 68.3 68.4 68.5 68.6 68.6 68.7 68.8 68.9 69.0 69.0 69.1 69.2 69.3 69.4 69.4 69.5 69.6 69.7 69.7 69.8 69.9 70.0 70.1 70.1 70.2 70.3 70.4 70.5 70.5 70.6 70.7 70.8 70.9 70.9 71.0 71.1 71.2 71.2 71.3 71.4 71.5 71.6 71.6 71.7 71.8 71.9 72.0 72.0 72.1 72.2 72.3 72.4 72.4 72.5 72.6 72.7 72.7 72.8 72.9 73.0 73.1 73.1 73.2 73.3 73.4 73.5 73.5 73.6 73.7 73.8 73.9 73.9 74.0 74.1 74.2 74.2 74.3 74.4 74.5 74.6 74.6 74.7 74.8 74.9 75.0 75.0 75.1 75.2 75.3 75.4 75.4 75.5 75.6 75.7 75.8 75.8 75.9 76.0 76.1 76.1 76.2 76.3 76.4 76.5 76.5 76.6 76.7 76.8 76.9 76.9 77.0 77.1 77.2 77.3 77.3 77.4 77.5 77.6 77.6 77.7 77.8 77.9 78.0 78.0 78.1 78.2 78.3 78.4 78.4 78.5 78.6 78.7 78.8 78.8 78.9 79.0 79.1 79.1 79.2 79.3 79.4 79.5 79.5 79.6 79.7 79.8 79.9 79.9 80.0 80.1 80.2 80.3 80.3 80.4 80.5 80.6 80.6 80.7 80.8 80.9 81.0 81.0 81.1 81.2 81.3 81.4 81.4 81.5 81.6 81.7 81.8 81.8 81.9 82.0 82.1 82.1 82.2 82.3 82.4 82.5 82.5 82.6 82.7 82.8 82.9 82.9 83.0 83.1 83.2 83.3 83.3 83.4 83.5 83.6 83.6 83.7 83.8 83.9 84.0 84.0 84.1 84.2 84.3 84.4 84.4 84.5 84.6 84.7 84.8 84.8 84.9 85.0 85.1 85.2 85.2 85.3 85.4 85.5 85.5 85.6 85.7 85.8 85.9 85.9 86.0 86.1 86.2 86.3 86.3 86.4 86.5 86.6 86.7 86.7 86.8 86.9 87.0 87.0 87.1 87.2 87.3 87.4 87.4 87.5 87.6 87.7 87.8 87.8 87.9 88.0 88.1 88.2 88.2 88.3 88.4 88.5 88.5 88.6 88.7 88.8 88.9 88.9 89.0 89.1 89.2 89.3 89.3 89.4 89.5 89.6 89.7 89.7 89.8 89.9 90.0 90.0 90.1 90.2 90.3 90.4 90.4 90.5 90.6 90.7 90.8 90.8 90.9 91.0 91.1 91.2 91.2 91.3 91.4 91.5 91.5 91.6 91.7 91.8 91.9 91.9 92.0 92.1 92.2 92.3 92.3 92.4 92.5 92.6 92.7 92.7 92.8 92.9 93.0 93.0 93.1 93.2 93.3 93.4 93.4 93.5 93.6 93.7 93.8 93.8 93.9 94.0 94.1 94.2 94.2 94.3 94.4 94.5 94.5 94.6 94.7 94.8 94.9 94.9 95.0 95.1 95.2 95.3 95.3 95.4 95.5 95.6 95.7 95.7 95.8 95.9 96.0 96.1 96.1 96.2 96.3 96.4 96.4 96.5 96.6 96.7 96.8 96.8 96.9 97.0 97.1 97.2 97.2 97.3 97.4 97.5 97.6 97.6 97.7 97.8 97.9 97.9 98.0 98.1 98.2 98.3 98.3 98.4 98.5 98.6 98.7 98.7 98.8 98.9 99.0 99.1 99.1 99.2 99.3 99.4 99.4 99.5 99.6 99.7 99.8 99.8 99.9 -found 39 predictions from path traversal Error with prediction: snap lend_intergenic: 10683, rend_intergenic: 9664 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 18994, rend_intergenic: 12025 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 30743, rend_intergenic: 24695 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42563, rend_intergenic: 31687 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50122, rend_intergenic: 44365 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 52066, rend_intergenic: 51056 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 86473, rend_intergenic: 52405 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 90750, rend_intergenic: 86483 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 100748, rend_intergenic: 92323 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 122049, rend_intergenic: 100865 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 132827, rend_intergenic: 130477 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 141827, rend_intergenic: 134246 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 145428, rend_intergenic: 142038 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149055, rend_intergenic: 146421 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 162205, rend_intergenic: 150235 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 177247, rend_intergenic: 173082 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 190485, rend_intergenic: 180351 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207383, rend_intergenic: 198555 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209581, rend_intergenic: 208429 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 233240, rend_intergenic: 210139 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 236078, rend_intergenic: 233372 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 237412, rend_intergenic: 236209 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 249637, rend_intergenic: 240868 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 258088, rend_intergenic: 250551 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 263496, rend_intergenic: 259486 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 279186, rend_intergenic: 264050 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 32 predictions persist after filtering for low support -building DP trellis -building trellis in range 278736 - 301342 -exon list size: 22 building trellis 4.2 8.3 12.5 16.7 20.8 25.0 29.2 33.3 37.5 41.7 45.8 50.0 54.2 58.3 62.5 66.7 70.8 75.0 79.2 83.3 87.5 91.7 95.8 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 279246 - 301342 -exon list size: 18 building trellis 5.0 10.0 15.0 20.0 25.0 30.0 35.0 40.0 45.0 50.0 55.0 60.0 65.0 70.0 75.0 80.0 85.0 90.0 95.0 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 279246 - 298989 -exon list size: 16 building trellis 5.6 11.1 16.7 22.2 27.8 33.3 38.9 44.4 50.0 55.6 61.1 66.7 72.2 77.8 83.3 88.9 94.4 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support -building DP trellis -building trellis in range 279246 - 292159 -exon list size: 9 building trellis 9.1 18.2 27.3 36.4 45.5 54.5 63.6 72.7 81.8 90.9 -found 1 predictions from path traversal -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support