-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_4/scaffold_4_18998358-19210467

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.18986_t
Valid prediction for snap_scaffold_4-snap.3935-T1
Valid prediction for GeneMark_model.19016_t
Valid prediction for GlimmerHMM_glimmerT_11462-T1
Valid prediction for GeneMark_model.18995_t
Valid prediction for GlimmerHMM_glimmerT_11457-T1
Valid prediction for snap_scaffold_4-snap.3918-T1
Valid prediction for snap_scaffold_4-snap.3922-T1
Valid prediction for HiQ_model.g7570.t1
Valid prediction for CodingQuarry_transcript_49286-T1
Valid prediction for GeneMark_model.19024_t
Valid prediction for HiQ_model.g7573.t1
Valid prediction for GeneMark_model.18971_t
Valid prediction for GlimmerHMM_glimmerT_11470-T1
Valid prediction for GeneMark_model.19001_t
Valid prediction for GlimmerHMM_glimmerT_11440-T1
Valid prediction for GeneMark_model.19010_t
Valid prediction for CodingQuarry_transcript_49285-T1
Valid prediction for GlimmerHMM_glimmerT_11467-T1
Valid prediction for GeneMark_model.19023_t
Valid prediction for GeneMark_model.18997_t
Valid prediction for GeneMark_model.19018_t
Valid prediction for GeneMark_model.19014_t
Valid prediction for GeneMark_model.18981_t
Valid prediction for GeneMark_model.19012_t
Valid prediction for Augustus_model.g7566.t1
Valid prediction for GlimmerHMM_glimmerT_11473-T1
Valid prediction for pasa_asmbl_43472.p1
Valid prediction for GlimmerHMM_glimmerT_11454-T1
Valid prediction for GeneMark_model.18965_t
Valid prediction for snap_scaffold_4-snap.3930-T1
Couldn't classify 16634, 16750
Sorry, prediction pasa_asmbl_43466.p1 fails validation.
(GTG)	 AG	16634-16750	GT	AGG
(AGG)	 AG	16840-16982	GT	AGG
(AGA)	 AG	17072-17208	GT	CGG
(CCG)	 AG	17344-17441	GT	CTG
(TCT)	 AG	18555-18735	GT	AGG
(GAA)	 AG	18821-18900	TT	AGT
-recovered pasa_asmbl_43466.p1, terminal, 18821, 18900
-recovered pasa_asmbl_43466.p1, internal, 16634, 16750
-recovered pasa_asmbl_43466.p1, internal, 16840, 16982
-recovered pasa_asmbl_43466.p1, internal, 17072, 17208
-recovered pasa_asmbl_43466.p1, internal, 17344, 17441
-recovered pasa_asmbl_43466.p1, internal, 18555, 18735
Valid prediction for GlimmerHMM_glimmerT_11441-T1
Valid prediction for GeneMark_model.19008_t
Valid prediction for CodingQuarry_transcript_49287-T1
Couldn't classify 124319, 124449
Couldn't classify 126449, 126499
Sorry, prediction pasa_asmbl_43467.p1 fails validation.
(CCC)	 CT	124319-124449	GT	AGG
(GCC)	 AG	125072-125744	GT	AGG
(GGG)	 AG	125896-126039	GT	AGG
(GTC)	 AG	126197-126310	GT	AGG
(GAG)	 AG	126449-126499	TG	GGT
-recovered pasa_asmbl_43467.p1, internal, 125072, 125744
-recovered pasa_asmbl_43467.p1, internal, 125896, 126039
-recovered pasa_asmbl_43467.p1, internal, 126197, 126310
Valid prediction for GlimmerHMM_glimmerT_11439-T1
Valid prediction for GeneMark_model.18977_t
Valid prediction for GeneMark_model.18991_t
Valid prediction for GeneMark_model.18974_t
Valid prediction for Augustus_model.g7567.t1
Valid prediction for GlimmerHMM_glimmerT_11471-T1
Valid prediction for snap_scaffold_4-snap.3943-T1
Valid prediction for GlimmerHMM_glimmerT_11458-T1
Valid prediction for GeneMark_model.18969_t
Valid prediction for Augustus_model.g7557.t1
Valid prediction for snap_scaffold_4-snap.3929-T1
Valid prediction for GeneMark_model.19021_t
Valid prediction for GeneMark_model.19007_t
Valid prediction for GeneMark_model.19003_t
Valid prediction for snap_scaffold_4-snap.3911-T1
Valid prediction for GeneMark_model.19020_t
Valid prediction for snap_scaffold_4-snap.3946-T1
Valid prediction for GeneMark_model.18967_t
Valid prediction for snap_scaffold_4-snap.3914-T1
Valid prediction for GeneMark_model.18993_t
Valid prediction for GeneMark_model.19013_t
Valid prediction for snap_scaffold_4-snap.3923-T1
Valid prediction for snap_scaffold_4-snap.3937-T1
Valid prediction for GeneMark_model.18984_t
Valid prediction for GlimmerHMM_glimmerT_11446-T1
Valid prediction for snap_scaffold_4-snap.3906-T1
Valid prediction for snap_scaffold_4-snap.3931-T1
Valid prediction for GlimmerHMM_glimmerT_11451-T1
Valid prediction for GlimmerHMM_glimmerT_11452-T1
Valid prediction for GlimmerHMM_glimmerT_11464-T1
Valid prediction for GlimmerHMM_glimmerT_11472-T1
Valid prediction for snap_scaffold_4-snap.3944-T1
Valid prediction for pasa_asmbl_43470.p1
Valid prediction for snap_scaffold_4-snap.3925-T1
Valid prediction for GlimmerHMM_glimmerT_11456-T1
Valid prediction for snap_scaffold_4-snap.3938-T1
Valid prediction for GeneMark_model.18989_t
Valid prediction for snap_scaffold_4-snap.3939-T1
Valid prediction for GlimmerHMM_glimmerT_11453-T1
Valid prediction for snap_scaffold_4-snap.3945-T1
Valid prediction for snap_scaffold_4-snap.3947-T1
Valid prediction for GeneMark_model.19006_t
Valid prediction for GeneMark_model.18998_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_4-snap.3920-T1
Valid prediction for GlimmerHMM_glimmerT_11443-T1
Valid prediction for GeneMark_model.19002_t
Valid prediction for CodingQuarry_transcript_49283-T1
Valid prediction for snap_scaffold_4-snap.3908-T1
Valid prediction for snap_scaffold_4-snap.3909-T1
Valid prediction for GeneMark_model.18968_t
Couldn't classify 185008, 185097
Sorry, prediction pasa_asmbl_42150.p1 fails validation.
(ATG)	 CC	183905-184696	GT	AGG
(GGT)	 AG	185008-185097	AC	TGA
-recovered pasa_asmbl_42150.p1, initial, 183905, 184696
Valid prediction for GlimmerHMM_glimmerT_11466-T1
Valid prediction for CodingQuarry_transcript_49282-T1
Valid prediction for snap_scaffold_4-snap.3928-T1
Valid prediction for snap_scaffold_4-snap.3932-T1
Valid prediction for GeneMark_model.18972_t
Valid prediction for Augustus_model.g7572.t1
Valid prediction for CodingQuarry_transcript_49284-T1
Valid prediction for GlimmerHMM_glimmerT_11448-T1
Couldn't classify 182369, 183277
Sorry, prediction pasa_asmbl_42153.p1 fails validation.
(ATG)	 GA	182369-183277	CA	AGC
Valid prediction for snap_scaffold_4-snap.3917-T1
Valid prediction for snap_scaffold_4-snap.3921-T1
Valid prediction for GeneMark_model.18990_t
Valid prediction for GeneMark_model.18982_t
Valid prediction for GeneMark_model.18988_t
Valid prediction for snap_scaffold_4-snap.3913-T1
Valid prediction for GeneMark_model.19022_t
Valid prediction for GeneMark_model.19025_t
Valid prediction for snap_scaffold_4-snap.3941-T1
Valid prediction for GlimmerHMM_glimmerT_11459-T1
Valid prediction for GeneMark_model.18992_t
Valid prediction for snap_scaffold_4-snap.3934-T1
Valid prediction for GeneMark_model.18985_t
Valid prediction for pasa_asmbl_42164.p1
Valid prediction for GeneMark_model.18996_t
Valid prediction for HiQ_model.g7565.t1
Valid prediction for GlimmerHMM_glimmerT_11445-T1
Valid prediction for snap_scaffold_4-snap.3924-T1
Valid prediction for GeneMark_model.18966_t
Couldn't classify 2000, 2329
Sorry, prediction pasa_asmbl_42167.p1 fails validation.
(GTG)	 AG	2000-2329	GT	TGG
-recovered pasa_asmbl_42167.p1, internal, 2000, 2329
Valid prediction for GeneMark_model.18976_t
Valid prediction for HiQ_model.g7564.t1
Valid prediction for Augustus_model.g7569.t1
Valid prediction for Augustus_model.g7561.t1
Valid prediction for snap_scaffold_4-snap.3915-T1
Valid prediction for snap_scaffold_4-snap.3926-T1
Valid prediction for snap_scaffold_4-snap.3919-T1
Valid prediction for Augustus_model.g7563.t1
Valid prediction for snap_scaffold_4-snap.3916-T1
Valid prediction for GeneMark_model.18999_t
Valid prediction for GlimmerHMM_glimmerT_11461-T1
Valid prediction for snap_scaffold_4-snap.3936-T1
Valid prediction for GeneMark_model.19000_t
Couldn't classify 175637, 175680
Sorry, prediction pasa_asmbl_42154.p1 fails validation.
(TTA)	 AG	175637-175680	GT	TGG
(TGT)	 AG	176336-176476	GT	AAG
(TAA)	 AG	176599-176713	GT	ATG
(CTG)	 AG	176989-177075	GT	ATG
(CTG)	 AG	177223-177291	GT	AGG
(GAG)	 AG	177556-177771	GT	TGG
(GCT)	 AG	178480-178588	GT	CGG
(AAT)	 AG	179042-179179	GT	AGG
(AGT)	 AG	179531-179589	GT	AGG
(GAC)	 AG	180341-180514	AC	AAA
-recovered pasa_asmbl_42154.p1, terminal, 180341, 180514
-recovered pasa_asmbl_42154.p1, internal, 175637, 175680
-recovered pasa_asmbl_42154.p1, internal, 176336, 176476
-recovered pasa_asmbl_42154.p1, internal, 176599, 176713
-recovered pasa_asmbl_42154.p1, internal, 176989, 177075
-recovered pasa_asmbl_42154.p1, internal, 177223, 177291
-recovered pasa_asmbl_42154.p1, internal, 177556, 177771
-recovered pasa_asmbl_42154.p1, internal, 178480, 178588
-recovered pasa_asmbl_42154.p1, internal, 179042, 179179
-recovered pasa_asmbl_42154.p1, internal, 179531, 179589
Valid prediction for Augustus_model.g7559.t1
Valid prediction for GlimmerHMM_glimmerT_11455-T1
Valid prediction for GlimmerHMM_glimmerT_11469-T1
Valid prediction for GeneMark_model.19015_t
Valid prediction for GlimmerHMM_glimmerT_11460-T1
Valid prediction for GeneMark_model.18978_t
Valid prediction for GeneMark_model.19019_t
Couldn't classify 186205, 186305
Sorry, prediction pasa_asmbl_42149.p1 fails validation.
(CCC)	 CC	186205-186305	GT	AGG
(GTG)	 AG	186682-186858	GT	AAG
(GAT)	 AG	187166-187232	CA	GAC
-recovered pasa_asmbl_42149.p1, terminal, 187166, 187232
-recovered pasa_asmbl_42149.p1, internal, 186682, 186858
Valid prediction for GeneMark_model.18970_t
Valid prediction for GeneMark_model.18975_t
Valid prediction for GlimmerHMM_glimmerT_11465-T1
Valid prediction for snap_scaffold_4-snap.3907-T1
Valid prediction for GeneMark_model.18973_t
Valid prediction for GlimmerHMM_glimmerT_11444-T1
Valid prediction for HiQ_model.g7562.t1
Valid prediction for GeneMark_model.18987_t
Valid prediction for GeneMark_model.19017_t
Valid prediction for GeneMark_model.19009_t
Valid prediction for snap_scaffold_4-snap.3933-T1
Valid prediction for snap_scaffold_4-snap.3910-T1
Valid prediction for snap_scaffold_4-snap.3912-T1
Valid prediction for snap_scaffold_4-snap.3927-T1
Couldn't classify 156270, 156541
Sorry, prediction pasa_asmbl_42161.p1 fails validation.
(AGG)	 AC	156270-156541	GT	AGG
(GAC)	 AG	157102-157387	GT	AGG
(TGG)	 AG	157535-157746	GT	AAG
(GCT)	 AG	157980-158067	GT	AGG
(CTT)	 AG	158239-158415	GT	GAG
-recovered pasa_asmbl_42161.p1, terminal, 158239, 158415
-recovered pasa_asmbl_42161.p1, internal, 157102, 157387
-recovered pasa_asmbl_42161.p1, internal, 157535, 157746
-recovered pasa_asmbl_42161.p1, internal, 157980, 158067
-recovered pasa_asmbl_42161.p1, internal, 158239, 158415
Valid prediction for HiQ_model.g7560.t1
Valid prediction for GlimmerHMM_glimmerT_11449-T1
Valid prediction for Augustus_model.g7574.t1
Valid prediction for Augustus_model.g7558.t1
Valid prediction for Augustus_model.g7571.t1
Valid prediction for GeneMark_model.18983_t
Valid prediction for GlimmerHMM_glimmerT_11447-T1
Couldn't classify 188105, 188374
Couldn't classify 189671, 190099
Sorry, prediction pasa_asmbl_42148.p1 fails validation.
(TCT)	 AG	188105-188374	GT	AGG
(GTT)	 AG	188807-188919	GT	CAG
(GTT)	 AG	189369-189456	GT	AGG
(CAA)	 AG	189671-190099	CC	ACC
-recovered pasa_asmbl_42148.p1, internal, 188105, 188374
-recovered pasa_asmbl_42148.p1, internal, 188807, 188919
-recovered pasa_asmbl_42148.p1, internal, 189369, 189456
Valid prediction for GeneMark_model.18980_t
Couldn't classify 167258, 167439
Couldn't classify 170486, 170558
Sorry, prediction pasa_asmbl_42158.p1 fails validation.
(CTG)	 AC	167258-167439	GT	CAG
(CAT)	 AG	168002-168085	GT	AGG
(ATT)	 AG	169102-169150	GT	GGG
(GAC)	 AG	169281-169365	GT	ATG
(TGA)	 AG	169514-169684	GT	TGG
(GTG)	 AG	169823-169955	GT	CGG
(GTC)	 AG	170051-170113	GT	AGG
(TAT)	 AG	170486-170558	AC	AGA
-recovered pasa_asmbl_42158.p1, internal, 168002, 168085
-recovered pasa_asmbl_42158.p1, internal, 169102, 169150
-recovered pasa_asmbl_42158.p1, internal, 169281, 169365
-recovered pasa_asmbl_42158.p1, internal, 169514, 169684
-recovered pasa_asmbl_42158.p1, internal, 169823, 169955
-recovered pasa_asmbl_42158.p1, internal, 170051, 170113
Valid prediction for pasa_asmbl_42165.p1
Couldn't classify 163517, 163587
Couldn't classify 165672, 165884
Sorry, prediction pasa_asmbl_42159.p1 fails validation.
(CTG)	 GT	163517-163587	GT	AGG
(CGA)	 AG	164664-164781	GT	TGG
(TAC)	 AG	164893-165045	GT	TGG
(AAC)	 AG	165672-165884	GA	TGG
-recovered pasa_asmbl_42159.p1, internal, 164664, 164781
-recovered pasa_asmbl_42159.p1, internal, 164893, 165045
Valid prediction for GeneMark_model.18964_t
Couldn't classify 2582, 2881
Sorry, prediction pasa_asmbl_42166.p2 fails validation.
(GAG)	 GT	2582-2881	GG	GAG
Valid prediction for GeneMark_model.19004_t
Valid prediction for GlimmerHMM_glimmerT_11468-T1
Valid prediction for GlimmerHMM_glimmerT_11463-T1
Valid prediction for snap_scaffold_4-snap.3940-T1
Valid prediction for GlimmerHMM_glimmerT_11442-T1
Valid prediction for GeneMark_model.18994_t
Valid prediction for GeneMark_model.19005_t
Valid prediction for GlimmerHMM_glimmerT_11450-T1
Valid prediction for Augustus_model.g7568.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 21662, rend_intergenic: 4896  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24874, rend_intergenic: 22102  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29613, rend_intergenic: 24879  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50515, rend_intergenic: 41019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75244, rend_intergenic: 61962  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108300, rend_intergenic: 104076  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118630, rend_intergenic: 111034  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131438, rend_intergenic: 119385  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137768, rend_intergenic: 134090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147098, rend_intergenic: 143772  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155706, rend_intergenic: 153811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156605, rend_intergenic: 155746  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172053, rend_intergenic: 157320  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193155, rend_intergenic: 177753  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 212110
-exon list size: 965


building trellis

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34.5    
34.6    
34.7    
34.9    
35.0    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
38.0    
38.1    
38.2    
38.3    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.8    
41.0    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 37 predictions from path traversal
Error with prediction: snap lend_intergenic: 21662, rend_intergenic: 4896  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24874, rend_intergenic: 22102  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 29613, rend_intergenic: 24879  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 50515, rend_intergenic: 41019  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75244, rend_intergenic: 61962  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108300, rend_intergenic: 104076  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118630, rend_intergenic: 111034  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131438, rend_intergenic: 119385  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137768, rend_intergenic: 134090  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 147098, rend_intergenic: 143772  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155706, rend_intergenic: 153811  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 156605, rend_intergenic: 155746  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 172053, rend_intergenic: 157320  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 193155, rend_intergenic: 177753  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 27 predictions persist after filtering for low support