-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_4/scaffold_4_18746125-19002728 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.18917_t Valid prediction for GlimmerHMM_glimmerT_11425-T1 Valid prediction for Augustus_model.g7553.t1 Valid prediction for GeneMark_model.18923_t Valid prediction for GlimmerHMM_glimmerT_11426-T1 Valid prediction for GeneMark_model.18889_t Valid prediction for GeneMark_model.18963_t Valid prediction for CodingQuarry_transcript_49275-T1 Valid prediction for GlimmerHMM_glimmerT_11410-T1 Valid prediction for HiQ_model.g7548.t1 Valid prediction for GeneMark_model.18928_t Valid prediction for GeneMark_model.18911_t Valid prediction for snap_scaffold_4-snap.3894-T1 Valid prediction for Augustus_model.g7538.t1 Valid prediction for GlimmerHMM_glimmerT_11436-T1 Valid prediction for GeneMark_model.18900_t Valid prediction for snap_scaffold_4-snap.3857-T1 Valid prediction for snap_scaffold_4-snap.3876-T1 Valid prediction for GlimmerHMM_glimmerT_11417-T1 Valid prediction for GeneMark_model.18932_t Valid prediction for GeneMark_model.18954_t Valid prediction for GeneMark_model.18930_t Valid prediction for GeneMark_model.18891_t Valid prediction for GeneMark_model.18898_t Valid prediction for GeneMark_model.18940_t Valid prediction for GeneMark_model.18938_t Valid prediction for Augustus_model.g7551.t1 Valid prediction for snap_scaffold_4-snap.3884-T1 Valid prediction for snap_scaffold_4-snap.3868-T1 Valid prediction for GlimmerHMM_glimmerT_11414-T1 Valid prediction for HiQ_model.g7556.t1 Valid prediction for GeneMark_model.18950_t Valid prediction for snap_scaffold_4-snap.3880-T1 Valid prediction for GeneMark_model.18944_t Valid prediction for GeneMark_model.18934_t Valid prediction for Augustus_model.g7547.t1 Valid prediction for snap_scaffold_4-snap.3899-T1 Valid prediction for snap_scaffold_4-snap.3864-T1 Valid prediction for GlimmerHMM_glimmerT_11419-T1 Valid prediction for Augustus_model.g7554.t1 Valid prediction for GlimmerHMM_glimmerT_11420-T1 Valid prediction for snap_scaffold_4-snap.3856-T1 Valid prediction for GlimmerHMM_glimmerT_11430-T1 Couldn't classify 52875, 53557 Sorry, prediction pasa_asmbl_43589.p1 fails validation. (ATG) CG 46876-46929 GT AGG (GAG) AG 47063-47135 GT AGG (GAG) AG 47319-47383 GT AGG (ATG) AG 47479-48142 GT AGG (TGA) AG 48519-48593 GT CGG (TAC) AG 49471-49704 GT AGG (GTG) AG 50563-50586 GT GGG (AGG) AG 51507-51559 GT AGG (GAA) AG 51668-51775 GT TGG (GCA) AG 51965-52199 GT AGG (CCA) AG 52875-53557 AA AGA -recovered pasa_asmbl_43589.p1, initial, 46876, 46929 -recovered pasa_asmbl_43589.p1, initial, 47479, 48142 -recovered pasa_asmbl_43589.p1, internal, 47063, 47135 -recovered pasa_asmbl_43589.p1, internal, 47319, 47383 -recovered pasa_asmbl_43589.p1, internal, 47479, 48142 -recovered pasa_asmbl_43589.p1, internal, 48519, 48593 -recovered pasa_asmbl_43589.p1, internal, 49471, 49704 -recovered pasa_asmbl_43589.p1, internal, 50563, 50586 -recovered pasa_asmbl_43589.p1, internal, 51507, 51559 -recovered pasa_asmbl_43589.p1, internal, 51668, 51775 -recovered pasa_asmbl_43589.p1, internal, 51965, 52199 Valid prediction for GeneMark_model.18919_t Valid prediction for GeneMark_model.18894_t Valid prediction for GeneMark_model.18903_t Valid prediction for GeneMark_model.18892_t Valid prediction for Augustus_model.g7536.t1 Couldn't classify 248335, 248479 Sorry, prediction pasa_asmbl_43461.p1 fails validation. (ACT) AG 248335-248479 GT AGG (CAC) AG 248700-248740 GT AGG (TGT) AG 249062-249122 GT AGG (ACC) AG 249771-249876 GT AGG (ACA) AG 250025-250295 AG GAA -recovered pasa_asmbl_43461.p1, terminal, 250025, 250295 -recovered pasa_asmbl_43461.p1, internal, 248335, 248479 -recovered pasa_asmbl_43461.p1, internal, 248700, 248740 -recovered pasa_asmbl_43461.p1, internal, 249062, 249122 -recovered pasa_asmbl_43461.p1, internal, 249771, 249876 Valid prediction for snap_scaffold_4-snap.3890-T1 Valid prediction for GlimmerHMM_glimmerT_11434-T1 Valid prediction for GeneMark_model.18942_t Valid prediction for snap_scaffold_4-snap.3902-T1 Valid prediction for GeneMark_model.18959_t Valid prediction for snap_scaffold_4-snap.3854-T1 Valid prediction for GlimmerHMM_glimmerT_11416-T1 Valid prediction for HiQ_model.g7539.t1 Valid prediction for HiQ_model.g7537.t1 Valid prediction for Augustus_model.g7540.t1 Valid prediction for GlimmerHMM_glimmerT_11435-T1 Valid prediction for snap_scaffold_4-snap.3889-T1 Valid prediction for GeneMark_model.18952_t Couldn't classify 26582, 26671 Couldn't classify 32588, 32635 Sorry, prediction pasa_asmbl_43454.p1 fails validation. (CGA) CT 26582-26671 GT GGG (TAC) AG 27005-27075 GT AGG (AGA) AG 27797-27860 GT AGG (CCA) AG 30127-30246 GT AGG (ATC) AG 31991-32044 GT CTG (GAC) AG 32588-32635 AT AGA -recovered pasa_asmbl_43454.p1, internal, 27005, 27075 -recovered pasa_asmbl_43454.p1, internal, 27797, 27860 -recovered pasa_asmbl_43454.p1, internal, 30127, 30246 -recovered pasa_asmbl_43454.p1, internal, 31991, 32044 Valid prediction for snap_scaffold_4-snap.3867-T1 Valid prediction for GlimmerHMM_glimmerT_11415-T1 Valid prediction for GlimmerHMM_glimmerT_11433-T1 Couldn't classify 242802, 242925 Couldn't classify 244506, 244699 Sorry, prediction pasa_asmbl_43549.p1 fails validation. (TGG) AA 242802-242925 GT AGG (AGC) AG 244506-244699 GC GGG -recovered pasa_asmbl_43549.p1, internal, 244506, 244699 Valid prediction for snap_scaffold_4-snap.3901-T1 Valid prediction for Augustus_model.g7552.t1 Valid prediction for GeneMark_model.18896_t Valid prediction for GlimmerHMM_glimmerT_11438-T1 Valid prediction for snap_scaffold_4-snap.3874-T1 Valid prediction for snap_scaffold_4-snap.3905-T1 Valid prediction for GeneMark_model.18913_t Valid prediction for GlimmerHMM_glimmerT_11422-T1 Valid prediction for snap_scaffold_4-snap.3886-T1 Valid prediction for GlimmerHMM_glimmerT_11413-T1 Valid prediction for GeneMark_model.18948_t Valid prediction for GeneMark_model.18910_t Couldn't classify 24610, 24933 Sorry, prediction pasa_asmbl_43452.p1 fails validation. (CTG) GT 24610-24933 CA GAC Valid prediction for GeneMark_model.18936_t Valid prediction for snap_scaffold_4-snap.3888-T1 Valid prediction for Augustus_model.g7541.t1 Valid prediction for HiQ_model.g7542.t1 Valid prediction for snap_scaffold_4-snap.3893-T1 Valid prediction for GeneMark_model.18888_t Valid prediction for Augustus_model.g7549.t1 Valid prediction for GeneMark_model.18961_t Couldn't classify 228177, 228199 Sorry, prediction GeneMark_model.18957_t fails validation. (AGA) AG 228177-228199 GT AAG (AAG) AG 228222-228237 GT GGG (CAG) AG 228261-228418 GT GGG (GGC) AG 228507-228668 GT TGG (GGT) AG 228709-228750 GT GCG (GCC) AG 228983-229039 GT GGG (CAA) AG 229063-229089 GT AGG (GCA) AG 229134-229155 GG GAG -recovered GeneMark_model.18957_t, terminal, 229134, 229155 -recovered GeneMark_model.18957_t, internal, 228177, 228199 -recovered GeneMark_model.18957_t, internal, 228222, 228237 -recovered GeneMark_model.18957_t, internal, 228261, 228418 -recovered GeneMark_model.18957_t, internal, 228507, 228668 -recovered GeneMark_model.18957_t, internal, 228709, 228750 -recovered GeneMark_model.18957_t, internal, 228983, 229039 -recovered GeneMark_model.18957_t, internal, 229063, 229089 Valid prediction for GeneMark_model.18925_t Valid prediction for GeneMark_model.18908_t Valid prediction for snap_scaffold_4-snap.3898-T1 Valid prediction for GlimmerHMM_glimmerT_11412-T1 Valid prediction for Augustus_model.g7555.t1 Valid prediction for GlimmerHMM_glimmerT_11427-T1 Valid prediction for GeneMark_model.18914_t Valid prediction for snap_scaffold_4-snap.3883-T1 Valid prediction for GeneMark_model.18955_t Valid prediction for GlimmerHMM_glimmerT_11432-T1 Valid prediction for snap_scaffold_4-snap.3877-T1 Valid prediction for GeneMark_model.18921_t Valid prediction for pasa_asmbl_43457.p1 Valid prediction for GeneMark_model.18907_t Valid prediction for snap_scaffold_4-snap.3851-T1 Valid prediction for snap_scaffold_4-snap.3870-T1 Valid prediction for GeneMark_model.18901_t Valid prediction for CodingQuarry_transcript_49280-T1 Valid prediction for GlimmerHMM_glimmerT_11418-T1 Valid prediction for snap_scaffold_4-snap.3896-T1 Valid prediction for snap_scaffold_4-snap.3859-T1 Valid prediction for Augustus_model.g7543.t1 Valid prediction for snap_scaffold_4-snap.3860-T1 Valid prediction for GeneMark_model.18905_t -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_4-snap.3903-T1 Valid prediction for GeneMark_model.18927_t Valid prediction for GeneMark_model.18958_t Valid prediction for GeneMark_model.18920_t Valid prediction for snap_scaffold_4-snap.3861-T1 Valid prediction for snap_scaffold_4-snap.3863-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for GeneMark_model.18933_t Valid prediction for snap_scaffold_4-snap.3862-T1 Valid prediction for GlimmerHMM_glimmerT_11431-T1 Valid prediction for GeneMark_model.18887_t Valid prediction for GeneMark_model.18949_t Valid prediction for GlimmerHMM_glimmerT_11423-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for snap_scaffold_4-snap.3887-T1 Valid prediction for GeneMark_model.18909_t Valid prediction for snap_scaffold_4-snap.3892-T1 Valid prediction for GeneMark_model.18943_t Valid prediction for Augustus_model.g7545.t1 Valid prediction for GeneMark_model.18890_t Valid prediction for Augustus_model.g7546.t1 Valid prediction for GlimmerHMM_glimmerT_11421-T1 Valid prediction for GeneMark_model.18951_t Valid prediction for snap_scaffold_4-snap.3853-T1 Valid prediction for snap_scaffold_4-snap.3855-T1 Valid prediction for GeneMark_model.18945_t Valid prediction for snap_scaffold_4-snap.3882-T1 Valid prediction for GeneMark_model.18953_t Valid prediction for GeneMark_model.18935_t Valid prediction for GeneMark_model.18929_t Valid prediction for snap_scaffold_4-snap.3904-T1 Valid prediction for snap_scaffold_4-snap.3866-T1 Valid prediction for snap_scaffold_4-snap.3881-T1 Valid prediction for snap_scaffold_4-snap.3879-T1 Valid prediction for snap_scaffold_4-snap.3858-T1 Valid prediction for GeneMark_model.18924_t Valid prediction for pasa_asmbl_42144.p1 Valid prediction for GeneMark_model.18941_t Valid prediction for GlimmerHMM_glimmerT_11424-T1 Valid prediction for GeneMark_model.18893_t Valid prediction for snap_scaffold_4-snap.3873-T1 Valid prediction for GlimmerHMM_glimmerT_11429-T1 Valid prediction for GeneMark_model.18915_t Valid prediction for GlimmerHMM_glimmerT_11411-T1 Valid prediction for GeneMark_model.18922_t Valid prediction for GeneMark_model.18947_t Valid prediction for snap_scaffold_4-snap.3865-T1 Valid prediction for GeneMark_model.18937_t Valid prediction for snap_scaffold_4-snap.3852-T1 Valid prediction for snap_scaffold_4-snap.3869-T1 Couldn't classify 38504, 38518 Sorry, prediction GeneMark_model.18956_t fails validation. (ACT) AG 38504-38518 GT CTG (GAA) AG 38620-38793 GT AGG (AGT) AG 38822-38851 GT GGG (GGA) AG 38883-38909 GT CAG (AGG) AG 39307-39385 GC GAG (AGA) AG 39433-39627 GG AAG -recovered GeneMark_model.18956_t, terminal, 39433, 39627 -recovered GeneMark_model.18956_t, internal, 38504, 38518 -recovered GeneMark_model.18956_t, internal, 38620, 38793 -recovered GeneMark_model.18956_t, internal, 38822, 38851 -recovered GeneMark_model.18956_t, internal, 38883, 38909 -recovered GeneMark_model.18956_t, internal, 39307, 39385 Valid prediction for snap_scaffold_4-snap.3885-T1 Valid prediction for GeneMark_model.18912_t Valid prediction for snap_scaffold_4-snap.3871-T1 Valid prediction for snap_scaffold_4-snap.3875-T1 Valid prediction for snap_scaffold_4-snap.3895-T1 Valid prediction for GeneMark_model.18906_t Valid prediction for GeneMark_model.18939_t Valid prediction for Augustus_model.g7544.t1 Couldn't classify 127542, 127673 Couldn't classify 127735, 127896 Sorry, prediction CodingQuarry_transcript_49277-T1 fails validation. (ATG) AA 124159-124614 GT CGG (CTG) AG 125463-125586 GT AGG (AGG) AG 126398-126640 GT AGG (CTC) AG 127542-127673 CC CCC (TTC) CC 127735-127896 GT AGG (CTG) AG 129411-129430 GT GAG -recovered CodingQuarry_transcript_49277-T1, initial, 124159, 124614 -recovered CodingQuarry_transcript_49277-T1, terminal, 129411, 129430 -recovered CodingQuarry_transcript_49277-T1, internal, 125463, 125586 -recovered CodingQuarry_transcript_49277-T1, internal, 126398, 126640 -recovered CodingQuarry_transcript_49277-T1, internal, 129411, 129430 Valid prediction for GeneMark_model.18895_t Valid prediction for snap_scaffold_4-snap.3897-T1 Valid prediction for GeneMark_model.18897_t Valid prediction for GlimmerHMM_glimmerT_11409-T1 Valid prediction for CodingQuarry_transcript_49278-T1 Valid prediction for GeneMark_model.18926_t Valid prediction for snap_scaffold_4-snap.3878-T1 Valid prediction for CodingQuarry_transcript_49279-T1 Valid prediction for HiQ_model.g7550.t1 Valid prediction for GeneMark_model.18899_t Valid prediction for GeneMark_model.18962_t Valid prediction for snap_scaffold_4-snap.3891-T1 Valid prediction for GeneMark_model.18960_t Valid prediction for GeneMark_model.18931_t Valid prediction for pasa_asmbl_42139.p1 Valid prediction for GlimmerHMM_glimmerT_11428-T1 Valid prediction for snap_scaffold_4-snap.3900-T1 Valid prediction for CodingQuarry_transcript_49276-T1 Valid prediction for GeneMark_model.18904_t Valid prediction for GlimmerHMM_glimmerT_11437-T1 Valid prediction for snap_scaffold_4-snap.3872-T1 Valid prediction for CodingQuarry_transcript_49274-T1 Valid prediction for GeneMark_model.18918_t Valid prediction for HiQ_model.g7535.t1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 11559, rend_intergenic: 6575 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16451, rend_intergenic: 14122 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16812, rend_intergenic: 16617 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 20296, rend_intergenic: 16924 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32005, rend_intergenic: 24964 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43087, rend_intergenic: 35743 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55449, rend_intergenic: 46750 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 68184, rend_intergenic: 56723 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74884, rend_intergenic: 71877 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 91854, rend_intergenic: 75317 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 98439, rend_intergenic: 91946 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 132058, rend_intergenic: 119341 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140451, rend_intergenic: 134488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144810, rend_intergenic: 140602 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156554, rend_intergenic: 144820 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163811, rend_intergenic: 161166 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170693, rend_intergenic: 168501 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179760, rend_intergenic: 170779 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 186178, rend_intergenic: 183147 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 198375, rend_intergenic: 187161 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205268, rend_intergenic: 202392 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209930, rend_intergenic: 206828 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 214477, rend_intergenic: 213839 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 239326, rend_intergenic: 214785 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242078, rend_intergenic: 239627 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251105, rend_intergenic: 243476 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 256604 -exon list size: 1126 building trellis 0.1 0.2 0.3 0.4 0.4 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.2 1.2 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.0 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.7 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.5 3.5 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.3 4.3 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.1 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 5.9 5.9 6.0 6.1 6.2 6.3 6.4 6.5 6.6 6.6 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.4 7.4 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.2 8.2 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.0 9.0 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.8 9.8 9.9 10.0 10.1 10.2 10.3 10.4 10.5 10.5 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.3 11.3 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.1 12.1 12.2 12.3 12.4 12.5 12.6 12.7 12.8 12.9 12.9 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.7 13.7 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.5 14.5 14.6 14.7 14.8 14.9 15.0 15.1 15.2 15.2 15.3 15.4 15.5 15.6 15.7 15.8 15.9 16.0 16.0 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.8 16.8 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.6 17.6 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.4 18.4 18.5 18.6 18.7 18.8 18.9 19.0 19.1 19.1 19.2 19.3 19.4 19.5 19.6 19.7 19.8 19.9 19.9 20.0 20.1 20.2 20.3 20.4 20.5 20.6 20.7 20.7 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.5 21.5 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.3 22.3 22.4 22.5 22.6 22.7 22.8 22.9 23.0 23.0 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.8 23.8 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.6 24.6 24.7 24.8 24.9 25.0 25.1 25.2 25.3 25.4 25.4 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.2 26.2 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.0 27.0 27.1 27.2 27.3 27.4 27.5 27.6 27.7 27.7 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.5 28.5 28.6 28.7 28.8 28.9 29.0 29.1 29.2 29.3 29.3 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.1 30.1 30.2 30.3 30.4 30.5 30.6 30.7 30.8 30.9 30.9 31.0 31.1 31.2 31.3 31.4 31.5 31.6 31.6 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.4 32.4 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.2 33.2 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.0 34.0 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.8 34.8 34.9 35.0 35.1 35.2 35.3 35.4 35.5 35.5 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.3 36.3 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.1 37.1 37.2 37.3 37.4 37.5 37.6 37.7 37.8 37.9 37.9 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.7 38.7 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.5 39.5 39.6 39.7 39.8 39.9 40.0 40.1 40.2 40.2 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.0 41.0 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.8 41.8 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.6 42.6 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.4 43.4 43.5 43.6 43.7 43.8 43.9 44.0 44.1 44.1 44.2 44.3 44.4 44.5 44.6 44.7 44.8 44.9 44.9 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.7 45.7 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.5 46.5 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.3 47.3 47.4 47.5 47.6 47.7 47.8 47.9 48.0 48.0 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.8 48.8 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.6 49.6 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.4 50.4 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.2 51.2 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.0 52.0 52.1 52.2 52.3 52.4 52.5 52.6 52.7 52.7 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.5 53.5 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.3 54.3 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.1 55.1 55.2 55.3 55.4 55.5 55.6 55.7 55.8 55.9 55.9 56.0 56.1 56.2 56.3 56.4 56.5 56.6 56.6 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.4 57.4 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.2 58.2 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.0 59.0 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.8 59.8 59.9 60.0 60.1 60.2 60.3 60.4 60.5 60.5 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.3 61.3 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.1 62.1 62.2 62.3 62.4 62.5 62.6 62.7 62.8 62.9 62.9 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.7 63.7 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.5 64.5 64.6 64.7 64.8 64.9 65.0 65.1 65.2 65.2 65.3 65.4 65.5 65.6 65.7 65.8 65.9 66.0 66.0 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.8 66.8 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.6 67.6 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.4 68.4 68.5 68.6 68.7 68.8 68.9 69.0 69.1 69.1 69.2 69.3 69.4 69.5 69.6 69.7 69.8 69.9 69.9 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.7 70.7 70.8 70.9 71.0 71.1 71.2 71.3 71.4 71.5 71.5 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.3 72.3 72.4 72.5 72.6 72.7 72.8 72.9 73.0 73.0 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.8 73.8 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.6 74.6 74.7 74.8 74.9 75.0 75.1 75.2 75.3 75.4 75.4 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.2 76.2 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.0 77.0 77.1 77.2 77.3 77.4 77.5 77.6 77.7 77.7 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.5 78.5 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.3 79.3 79.4 79.5 79.6 79.7 79.8 79.9 80.0 80.1 80.1 80.2 80.3 80.4 80.5 80.6 80.7 80.8 80.9 80.9 81.0 81.1 81.2 81.3 81.4 81.5 81.6 81.6 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.4 82.4 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.2 83.2 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.0 84.0 84.1 84.2 84.3 84.4 84.5 84.6 84.7 84.8 84.8 84.9 85.0 85.1 85.2 85.3 85.4 85.5 85.5 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.3 86.3 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.1 87.1 87.2 87.3 87.4 87.5 87.6 87.7 87.8 87.9 87.9 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.7 88.7 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.5 89.5 89.6 89.7 89.8 89.9 90.0 90.1 90.2 90.2 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.0 91.0 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.8 91.8 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.6 92.6 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.4 93.4 93.5 93.6 93.7 93.8 93.9 94.0 94.1 94.1 94.2 94.3 94.4 94.5 94.6 94.7 94.8 94.9 94.9 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.7 95.7 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.5 96.5 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.3 97.3 97.4 97.5 97.6 97.7 97.8 97.9 98.0 98.0 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.8 98.8 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.6 99.6 99.7 99.8 99.9 -found 41 predictions from path traversal Error with prediction: snap lend_intergenic: 11559, rend_intergenic: 6575 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16451, rend_intergenic: 14122 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 16812, rend_intergenic: 16617 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 20296, rend_intergenic: 16924 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32005, rend_intergenic: 24964 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 43087, rend_intergenic: 35743 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55449, rend_intergenic: 46750 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 68184, rend_intergenic: 56723 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 74884, rend_intergenic: 71877 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 91854, rend_intergenic: 75317 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 98439, rend_intergenic: 91946 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 132058, rend_intergenic: 119341 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 140451, rend_intergenic: 134488 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 144810, rend_intergenic: 140602 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 156554, rend_intergenic: 144820 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 163811, rend_intergenic: 161166 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 170693, rend_intergenic: 168501 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 179760, rend_intergenic: 170779 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 186178, rend_intergenic: 183147 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 198375, rend_intergenic: 187161 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 205268, rend_intergenic: 202392 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 209930, rend_intergenic: 206828 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 214477, rend_intergenic: 213839 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 239326, rend_intergenic: 214785 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 242078, rend_intergenic: 239627 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 251105, rend_intergenic: 243476 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 25 predictions persist after filtering for low support