-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_4/scaffold_4_18143243-18464621 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.18759_t Valid prediction for GeneMark_model.18747_t Valid prediction for snap_scaffold_4-snap.3781-T1 Valid prediction for Augustus_model.g7500.t1 Valid prediction for GeneMark_model.18717_t Valid prediction for GeneMark_model.18686_t Valid prediction for snap_scaffold_4-snap.3732-T1 Valid prediction for GeneMark_model.18703_t Valid prediction for GeneMark_model.18750_t Valid prediction for GeneMark_model.18734_t Valid prediction for Augustus_model.g7499.t1 Valid prediction for GeneMark_model.18737_t Valid prediction for GlimmerHMM_glimmerT_11348-T1 Valid prediction for GeneMark_model.18681_t Valid prediction for snap_scaffold_4-snap.3770-T1 Valid prediction for snap_scaffold_4-snap.3767-T1 Valid prediction for GlimmerHMM_glimmerT_11360-T1 Valid prediction for GeneMark_model.18680_t Valid prediction for Augustus_model.g7503.t1 Valid prediction for snap_scaffold_4-snap.3759-T1 Valid prediction for GeneMark_model.18721_t Valid prediction for snap_scaffold_4-snap.3749-T1 Valid prediction for Augustus_model.g7495.t1 Valid prediction for snap_scaffold_4-snap.3768-T1 Valid prediction for GeneMark_model.18691_t Valid prediction for GeneMark_model.18709_t Valid prediction for GlimmerHMM_glimmerT_11352-T1 Valid prediction for GeneMark_model.18715_t Valid prediction for snap_scaffold_4-snap.3746-T1 Valid prediction for snap_scaffold_4-snap.3783-T1 Valid prediction for snap_scaffold_4-snap.3740-T1 Valid prediction for snap_scaffold_4-snap.3739-T1 Valid prediction for snap_scaffold_4-snap.3777-T1 Valid prediction for GeneMark_model.18719_t Valid prediction for GeneMark_model.18700_t Valid prediction for Augustus_model.g7498.t1 Valid prediction for GlimmerHMM_glimmerT_11355-T1 Valid prediction for GeneMark_model.18705_t Couldn't classify 139585, 140031 Sorry, prediction pasa_asmbl_43429.p1 fails validation. (ACC) GG 139585-140031 GC CGG Valid prediction for GeneMark_model.18744_t Valid prediction for GlimmerHMM_glimmerT_11374-T1 Couldn't classify 140035, 140562 Sorry, prediction pasa_asmbl_43430.p1 fails validation. (CCC) CC 140035-140562 CA CCC Valid prediction for snap_scaffold_4-snap.3755-T1 Valid prediction for GeneMark_model.18711_t Couldn't classify 136169, 136771 Couldn't classify 138469, 138540 Sorry, prediction pasa_asmbl_43426.p1 fails validation. (GCT) AC 136169-136771 GT AGG (GTT) AG 138469-138540 AT GCA Valid prediction for snap_scaffold_4-snap.3724-T1 Valid prediction for GeneMark_model.18678_t Valid prediction for GeneMark_model.18760_t Couldn't classify 91781, 91835 Couldn't classify 94468, 94674 Sorry, prediction pasa_asmbl_43422.p1 fails validation. (GAA) GA 91781-91835 GT AGG (GCT) AG 93096-93244 GT AGG (ATA) AG 93634-93777 GT CAG (GGG) AG 94468-94674 GT AGG -recovered pasa_asmbl_43422.p1, internal, 93096, 93244 -recovered pasa_asmbl_43422.p1, internal, 93634, 93777 -recovered pasa_asmbl_43422.p1, internal, 94468, 94674 Valid prediction for GeneMark_model.18731_t Valid prediction for snap_scaffold_4-snap.3776-T1 Valid prediction for snap_scaffold_4-snap.3771-T1 Valid prediction for GeneMark_model.18763_t Valid prediction for GeneMark_model.18728_t Valid prediction for GeneMark_model.18682_t Valid prediction for GeneMark_model.18742_t Valid prediction for snap_scaffold_4-snap.3785-T1 Valid prediction for snap_scaffold_4-snap.3760-T1 Valid prediction for GeneMark_model.18725_t Couldn't classify 141757, 142513 Couldn't classify 146211, 146292 Sorry, prediction pasa_asmbl_43432.p1 fails validation. (CCC) AC 141757-142513 GT AGG (GAC) AG 145135-145459 GT AGG (TTC) AG 145684-145857 GT GAG (ACC) AG 146211-146292 GG TGG -recovered pasa_asmbl_43432.p1, terminal, 145135, 145459 -recovered pasa_asmbl_43432.p1, internal, 145135, 145459 -recovered pasa_asmbl_43432.p1, internal, 145684, 145857 Valid prediction for CodingQuarry_transcript_49262-T1 Valid prediction for GlimmerHMM_glimmerT_11341-T1 Valid prediction for snap_scaffold_4-snap.3773-T1 Valid prediction for GlimmerHMM_glimmerT_11377-T1 Couldn't classify 148358, 148535 Sorry, prediction pasa_asmbl_43435.p2 fails validation. (AGA) GG 148358-148535 GT AGG (GTC) AG 149109-149191 GT ATG (AGC) AG 149497-149616 GA GAG -recovered pasa_asmbl_43435.p2, terminal, 149497, 149616 -recovered pasa_asmbl_43435.p2, internal, 149109, 149191 Valid prediction for snap_scaffold_4-snap.3737-T1 Valid prediction for GeneMark_model.18739_t Valid prediction for snap_scaffold_4-snap.3758-T1 Valid prediction for HiQ_model.g7496.t1 Valid prediction for GeneMark_model.18752_t Couldn't classify 100642, 100734 Couldn't classify 102411, 102482 Sorry, prediction pasa_asmbl_43423.p1 fails validation. (TGC) AC 100642-100734 GT TGG (AAC) AG 101191-101304 GT AGG (GCT) AG 101995-102090 GT AGG (ACG) AG 102411-102482 GG GAG -recovered pasa_asmbl_43423.p1, internal, 101191, 101304 -recovered pasa_asmbl_43423.p1, internal, 101995, 102090 Valid prediction for GeneMark_model.18674_t Valid prediction for snap_scaffold_4-snap.3779-T1 Valid prediction for GeneMark_model.18769_t Couldn't classify 140659, 141522 Sorry, prediction pasa_asmbl_43431.p1 fails validation. (TCC) CC 140659-141522 CA CGC Couldn't classify 110318, 110485 Couldn't classify 113532, 113612 Sorry, prediction pasa_asmbl_43424.p1 fails validation. (CGG) AC 110318-110485 GT CGG (GAG) AG 112381-112439 GT AGG (TCT) AG 112896-112950 GT AGG (CTG) AG 113532-113612 GG GGG -recovered pasa_asmbl_43424.p1, internal, 112381, 112439 -recovered pasa_asmbl_43424.p1, internal, 112896, 112950 Valid prediction for GlimmerHMM_glimmerT_11353-T1 Valid prediction for GeneMark_model.18713_t Valid prediction for GeneMark_model.18771_t Couldn't classify 138625, 139149 Couldn't classify 139210, 139434 Sorry, prediction pasa_asmbl_43428.p1 fails validation. (CCC) CC 138625-139149 GT AGG (GAG) AG 139210-139434 GA CCG Valid prediction for snap_scaffold_4-snap.3784-T1 Valid prediction for GlimmerHMM_glimmerT_11357-T1 Valid prediction for GeneMark_model.18697_t Valid prediction for snap_scaffold_4-snap.3744-T1 Valid prediction for snap_scaffold_4-snap.3778-T1 Valid prediction for GlimmerHMM_glimmerT_11362-T1 Valid prediction for GlimmerHMM_glimmerT_11342-T1 Valid prediction for GlimmerHMM_glimmerT_11364-T1 Valid prediction for GeneMark_model.18757_t Valid prediction for GeneMark_model.18749_t Valid prediction for GeneMark_model.18767_t Valid prediction for GlimmerHMM_glimmerT_11344-T1 Valid prediction for GeneMark_model.18723_t Valid prediction for Augustus_model.g7494.t1 Valid prediction for GlimmerHMM_glimmerT_11351-T1 Valid prediction for GeneMark_model.18673_t Valid prediction for GlimmerHMM_glimmerT_11349-T1 Valid prediction for GlimmerHMM_glimmerT_11350-T1 Valid prediction for GeneMark_model.18773_t Valid prediction for Augustus_model.g7517.t1 Valid prediction for HiQ_model.g7513.t1 Valid prediction for GeneMark_model.18690_t Valid prediction for GeneMark_model.18688_t Valid prediction for HiQ_model.g7504.t1 Valid prediction for GeneMark_model.18741_t Valid prediction for GeneMark_model.18774_t Valid prediction for Augustus_model.g7501.t1 Valid prediction for GeneMark_model.18776_t Valid prediction for snap_scaffold_4-snap.3747-T1 Couldn't classify 113685, 113854 Couldn't classify 115424, 115496 Sorry, prediction pasa_asmbl_43425.p1 fails validation. (GGA) TG 113685-113854 GT GGG (GAT) AG 114643-114711 GT TGG (GAC) AG 115424-115496 GT AGG -recovered pasa_asmbl_43425.p1, internal, 114643, 114711 -recovered pasa_asmbl_43425.p1, internal, 115424, 115496 Valid prediction for snap_scaffold_4-snap.3764-T1 Valid prediction for GlimmerHMM_glimmerT_11343-T1 Valid prediction for snap_scaffold_4-snap.3742-T1 Valid prediction for pasa_asmbl_43440.p1 Valid prediction for GeneMark_model.18754_t Valid prediction for GlimmerHMM_glimmerT_11346-T1 Valid prediction for GlimmerHMM_glimmerT_11359-T1 Valid prediction for snap_scaffold_4-snap.3782-T1 Valid prediction for snap_scaffold_4-snap.3729-T1 Valid prediction for CodingQuarry_transcript_49264-T1 Valid prediction for Augustus_model.g7497.t1 Valid prediction for Augustus_model.g7507.t1 Valid prediction for snap_scaffold_4-snap.3790-T1 Valid prediction for GeneMark_model.18694_t Valid prediction for GeneMark_model.18683_t Valid prediction for GeneMark_model.18707_t Valid prediction for snap_scaffold_4-snap.3730-T1 Valid prediction for snap_scaffold_4-snap.3733-T1 Valid prediction for snap_scaffold_4-snap.3753-T1 Valid prediction for GeneMark_model.18765_t Couldn't classify 49509, 49688 Sorry, prediction pasa_asmbl_43566.p1 fails validation. (GGT) CA 49509-49688 GT CGG (AGT) AG 52487-52603 GT TGG (ACC) AG 53082-53132 CC AAC -recovered pasa_asmbl_43566.p1, terminal, 53082, 53132 -recovered pasa_asmbl_43566.p1, internal, 52487, 52603 Valid prediction for snap_scaffold_4-snap.3774-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.18672_t Valid prediction for snap_scaffold_4-snap.3788-T1 Valid prediction for snap_scaffold_4-snap.3736-T1 Valid prediction for GlimmerHMM_glimmerT_11371-T1 Valid prediction for GlimmerHMM_glimmerT_11367-T1 Valid prediction for snap_scaffold_4-snap.3789-T1 Couldn't classify 309897, 309947 Sorry, prediction GeneMark_model.18675_t fails validation. (TGG) AG 309897-309947 GT GAG (AGG) AG 309973-310026 GT AAG (TGT) AG 310078-310086 GT ATG (AGA) AG 310837-310845 GT CTG (AGG) AG 310869-310880 GC GGG (TAT) AG 310904-310954 GT GGG (GGA) AG 310979-311035 GT AGG (AGG) AG 311063-311125 GT GAG (AGG) AG 311151-311171 GT GCG (GGA) AG 311213-311251 GT GGG (GAG) AG 311273-311299 GT AGG (AGG) AG 311324-311365 GT GGG (GGG) AG 311398-311523 GT AGG (GGA) AG 311577-311661 GT GGG (GAC) AG 312458-312570 GT AAG (AGA) AG 312601-312751 GT TCG (CTA) AG 312870-313033 GT ACG (ACA) AG 313093-313179 GT GAG (AGC) AG 313227-313623 AG AGA add_exon() Sorry, GeneMark_model.18675_t 309973-310026-terminal-1 is invalid. -recovered GeneMark_model.18675_t, terminal, 309973, 310026 -recovered GeneMark_model.18675_t, terminal, 313227, 313623 -recovered GeneMark_model.18675_t, internal, 309897, 309947 -recovered GeneMark_model.18675_t, internal, 309973, 310026 -recovered GeneMark_model.18675_t, internal, 310078, 310086 -recovered GeneMark_model.18675_t, internal, 310837, 310845 -recovered GeneMark_model.18675_t, internal, 310869, 310880 -recovered GeneMark_model.18675_t, internal, 310904, 310954 -recovered GeneMark_model.18675_t, internal, 310979, 311035 -recovered GeneMark_model.18675_t, internal, 311063, 311125 -recovered GeneMark_model.18675_t, internal, 311151, 311171 -recovered GeneMark_model.18675_t, internal, 311213, 311251 -recovered GeneMark_model.18675_t, internal, 311273, 311299 -recovered GeneMark_model.18675_t, internal, 311324, 311365 -recovered GeneMark_model.18675_t, internal, 311398, 311523 -recovered GeneMark_model.18675_t, internal, 311577, 311661 -recovered GeneMark_model.18675_t, internal, 312458, 312570 -recovered GeneMark_model.18675_t, internal, 312601, 312751 -recovered GeneMark_model.18675_t, internal, 312870, 313033 -recovered GeneMark_model.18675_t, internal, 313093, 313179 Valid prediction for snap_scaffold_4-snap.3728-T1 Valid prediction for GeneMark_model.18764_t Valid prediction for GlimmerHMM_glimmerT_11373-T1 Valid prediction for GlimmerHMM_glimmerT_11366-T1 Valid prediction for snap_scaffold_4-snap.3780-T1 Valid prediction for GeneMark_model.18766_t Valid prediction for Augustus_model.g7518.t1 Valid prediction for GeneMark_model.18761_t Valid prediction for GeneMark_model.18718_t Valid prediction for pasa_asmbl_42109.p1 Valid prediction for GlimmerHMM_glimmerT_11356-T1 Couldn't classify 4120, 4185 Couldn't classify 4774, 4843 Sorry, prediction pasa_asmbl_42120.p1 fails validation. (TTT) CG 4120-4185 GT GGG (GAG) AG 4348-4616 GT AGG (ATT) AG 4774-4843 AA CGA -recovered pasa_asmbl_42120.p1, internal, 4348, 4616 Valid prediction for HiQ_model.g7506.t1 Valid prediction for GeneMark_model.18679_t Valid prediction for GlimmerHMM_glimmerT_11365-T1 Valid prediction for GeneMark_model.18693_t Valid prediction for GeneMark_model.18720_t Couldn't classify 304749, 304857 Sorry, prediction GeneMark_model.18676_t fails validation. (ATG) AG 301946-301971 GT AAG (AGC) AG 302019-302108 GT AGG (GGA) AG 302165-302188 GT GAG (AGG) AG 302223-302234 GC AGG (GGA) AG 302257-302268 GT GGG (GAA) AG 302329-302344 GT AGG (AAT) AG 302547-303007 GT TGG (GAG) AG 303562-303612 GT AGG (AGA) AG 303634-303652 GT AGG (AGG) AG 303680-303914 GT GGG (TTG) AG 304749-304857 GT AGG -recovered GeneMark_model.18676_t, initial, 301946, 301971 -recovered GeneMark_model.18676_t, terminal, 302165, 302188 -recovered GeneMark_model.18676_t, internal, 301946, 301971 -recovered GeneMark_model.18676_t, internal, 302019, 302108 -recovered GeneMark_model.18676_t, internal, 302165, 302188 -recovered GeneMark_model.18676_t, internal, 302223, 302234 -recovered GeneMark_model.18676_t, internal, 302257, 302268 -recovered GeneMark_model.18676_t, internal, 302329, 302344 -recovered GeneMark_model.18676_t, internal, 302547, 303007 -recovered GeneMark_model.18676_t, internal, 303562, 303612 -recovered GeneMark_model.18676_t, internal, 303634, 303652 -recovered GeneMark_model.18676_t, internal, 303680, 303914 -recovered GeneMark_model.18676_t, internal, 304749, 304857 Valid prediction for snap_scaffold_4-snap.3751-T1 Couldn't classify 195448, 195529 Sorry, prediction pasa_asmbl_42104.p1 fails validation. (TTT) AG 195448-195529 GT AGG (CTC) AG 195871-196017 GT GGG (GTA) AG 196552-196685 GT AGG (ATC) AG 196933-197105 GT AGG (GTT) AG 197302-197391 GT AGG (TTT) AG 198551-198698 GT TGG (GTG) AG 199037-199261 GT AGG (GAC) AG 200131-200294 GT AGG (CAA) AG 200410-200526 GT AGG (GTC) AG 200607-200712 TG GAT -recovered pasa_asmbl_42104.p1, terminal, 200607, 200712 -recovered pasa_asmbl_42104.p1, internal, 195448, 195529 -recovered pasa_asmbl_42104.p1, internal, 195871, 196017 -recovered pasa_asmbl_42104.p1, internal, 196552, 196685 -recovered pasa_asmbl_42104.p1, internal, 196933, 197105 -recovered pasa_asmbl_42104.p1, internal, 197302, 197391 -recovered pasa_asmbl_42104.p1, internal, 198551, 198698 -recovered pasa_asmbl_42104.p1, internal, 199037, 199261 -recovered pasa_asmbl_42104.p1, internal, 200131, 200294 -recovered pasa_asmbl_42104.p1, internal, 200410, 200526 Valid prediction for snap_scaffold_4-snap.3786-T1 Valid prediction for GeneMark_model.18699_t Valid prediction for Augustus_model.g7519.t1 Valid prediction for CodingQuarry_transcript_49265-T1 Valid prediction for snap_scaffold_4-snap.3766-T1 Valid prediction for Augustus_model.g7510.t1 Valid prediction for GeneMark_model.18748_t Valid prediction for GlimmerHMM_glimmerT_11363-T1 Valid prediction for snap_scaffold_4-snap.3763-T1 Sorry, intron length (8) is less than minimum required (10) Valid prediction for GeneMark_model.18736_t Valid prediction for pasa_asmbl_42110.p1 Valid prediction for CodingQuarry_transcript_49263-T1 Valid prediction for Augustus_model.g7512.t1 Valid prediction for snap_scaffold_4-snap.3731-T1 Valid prediction for snap_scaffold_4-snap.3756-T1 Valid prediction for snap_scaffold_4-snap.3725-T1 Valid prediction for GeneMark_model.18714_t Valid prediction for GeneMark_model.18745_t Valid prediction for GeneMark_model.18685_t Valid prediction for GeneMark_model.18729_t Valid prediction for GeneMark_model.18698_t Valid prediction for GeneMark_model.18704_t Valid prediction for GeneMark_model.18753_t Valid prediction for snap_scaffold_4-snap.3745-T1 Valid prediction for GeneMark_model.18756_t Valid prediction for GlimmerHMM_glimmerT_11340-T1 Valid prediction for GeneMark_model.18692_t Valid prediction for GeneMark_model.18727_t Valid prediction for GeneMark_model.18733_t Valid prediction for GeneMark_model.18768_t Valid prediction for HiQ_model.g7505.t1 Valid prediction for GeneMark_model.18708_t Valid prediction for pasa_asmbl_42102.p1 Valid prediction for GlimmerHMM_glimmerT_11361-T1 Valid prediction for Augustus_model.g7514.t1 Valid prediction for GeneMark_model.18712_t Valid prediction for GeneMark_model.18770_t Valid prediction for Augustus_model.g7508.t1 Valid prediction for GeneMark_model.18722_t Couldn't classify 2743, 3897 Sorry, prediction pasa_asmbl_42121.p1 fails validation. (CTC) GG 2743-3897 AA CCA Valid prediction for GeneMark_model.18738_t Valid prediction for Augustus_model.g7511.t1 Valid prediction for GeneMark_model.18684_t Valid prediction for GeneMark_model.18695_t Valid prediction for Augustus_model.g7516.t1 Valid prediction for snap_scaffold_4-snap.3727-T1 Valid prediction for GlimmerHMM_glimmerT_11358-T1 Valid prediction for GeneMark_model.18724_t Valid prediction for snap_scaffold_4-snap.3734-T1 Valid prediction for snap_scaffold_4-snap.3743-T1 Valid prediction for snap_scaffold_4-snap.3726-T1 Valid prediction for snap_scaffold_4-snap.3765-T1 Valid prediction for GlimmerHMM_glimmerT_11345-T1 Valid prediction for snap_scaffold_4-snap.3761-T1 Valid prediction for GeneMark_model.18743_t Valid prediction for GeneMark_model.18689_t Valid prediction for snap_scaffold_4-snap.3775-T1 Valid prediction for snap_scaffold_4-snap.3757-T1 Valid prediction for GeneMark_model.18751_t Valid prediction for GlimmerHMM_glimmerT_11368-T1 Valid prediction for GeneMark_model.18732_t Valid prediction for snap_scaffold_4-snap.3750-T1 Valid prediction for snap_scaffold_4-snap.3754-T1 Valid prediction for GeneMark_model.18696_t Valid prediction for GeneMark_model.18758_t Valid prediction for GeneMark_model.18740_t Valid prediction for snap_scaffold_4-snap.3752-T1 Valid prediction for snap_scaffold_4-snap.3748-T1 Valid prediction for GeneMark_model.18772_t Valid prediction for pasa_asmbl_42105.p1 Valid prediction for GeneMark_model.18735_t Couldn't classify 123951, 123986 Couldn't classify 124141, 124269 Sorry, prediction CodingQuarry_transcript_49266-T1 fails validation. (ATG) AT 123951-123986 GA CAG (CAC) CA 124141-124269 AG AGA Valid prediction for GlimmerHMM_glimmerT_11354-T1 Valid prediction for GlimmerHMM_glimmerT_11369-T1 Valid prediction for HiQ_model.g7502.t1 Valid prediction for GlimmerHMM_glimmerT_11372-T1 Valid prediction for GeneMark_model.18710_t Valid prediction for snap_scaffold_4-snap.3735-T1 Valid prediction for snap_scaffold_4-snap.3787-T1 Valid prediction for snap_scaffold_4-snap.3738-T1 Valid prediction for GeneMark_model.18671_t Valid prediction for GeneMark_model.18746_t Valid prediction for snap_scaffold_4-snap.3741-T1 Valid prediction for GlimmerHMM_glimmerT_11376-T1 Valid prediction for Augustus_model.g7515.t1 Valid prediction for GeneMark_model.18755_t Valid prediction for GeneMark_model.18716_t Valid prediction for GlimmerHMM_glimmerT_11375-T1 Valid prediction for GlimmerHMM_glimmerT_11370-T1 Valid prediction for GlimmerHMM_glimmerT_11378-T1 Valid prediction for GeneMark_model.18726_t Valid prediction for GeneMark_model.18677_t Couldn't classify 7376, 7509 Couldn't classify 12319, 12559 Sorry, prediction pasa_asmbl_42118.p1 fails validation. (GAG) AC 7376-7509 GT AAG (GTT) AG 8225-8393 GT TGG (CTA) AG 8786-8954 GT AGG (GAA) AG 9129-9222 GT AGG (GTT) AG 10049-10165 GT AGG (CAC) AG 10399-10529 GT TGG (GTG) AG 10934-11116 GT GGG (GCT) AG 11689-11801 GT AGG (GTG) AG 11898-12025 GT GGG (GCC) AG 12319-12559 GG CGG -recovered pasa_asmbl_42118.p1, internal, 8225, 8393 -recovered pasa_asmbl_42118.p1, internal, 8786, 8954 -recovered pasa_asmbl_42118.p1, internal, 9129, 9222 -recovered pasa_asmbl_42118.p1, internal, 10049, 10165 -recovered pasa_asmbl_42118.p1, internal, 10399, 10529 -recovered pasa_asmbl_42118.p1, internal, 10934, 11116 -recovered pasa_asmbl_42118.p1, internal, 11689, 11801 -recovered pasa_asmbl_42118.p1, internal, 11898, 12025 Valid prediction for GeneMark_model.18775_t Valid prediction for GeneMark_model.18701_t Valid prediction for GeneMark_model.18687_t Valid prediction for GeneMark_model.18730_t Valid prediction for GlimmerHMM_glimmerT_11347-T1 Valid prediction for snap_scaffold_4-snap.3762-T1 Valid prediction for snap_scaffold_4-snap.3769-T1 Valid prediction for HiQ_model.g7509.t1 Couldn't classify 121445, 121510 Sorry, prediction pasa_asmbl_42115.p1 fails validation. (ATG) TT 117415-117538 GT TGG (GAA) AG 118903-118963 GT TGG (GGA) AG 119543-119603 GT TGG (GGA) AG 119741-119818 GT AGG (AAC) AG 120514-120603 GT AGG (CTG) AG 121445-121510 GT AGG -recovered pasa_asmbl_42115.p1, initial, 117415, 117538 -recovered pasa_asmbl_42115.p1, internal, 118903, 118963 -recovered pasa_asmbl_42115.p1, internal, 119543, 119603 -recovered pasa_asmbl_42115.p1, internal, 119741, 119818 -recovered pasa_asmbl_42115.p1, internal, 120514, 120603 -recovered pasa_asmbl_42115.p1, internal, 121445, 121510 Valid prediction for GeneMark_model.18702_t Valid prediction for snap_scaffold_4-snap.3772-T1 Valid prediction for GeneMark_model.18762_t Valid prediction for GeneMark_model.18706_t -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 19452, rend_intergenic: 3234 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31087, rend_intergenic: 19555 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32151, rend_intergenic: 31089 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34862, rend_intergenic: 32357 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42141, rend_intergenic: 34975 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50466, rend_intergenic: 43021 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55782, rend_intergenic: 50557 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64044, rend_intergenic: 59102 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71054, rend_intergenic: 65745 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75216, rend_intergenic: 71147 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 78355, rend_intergenic: 76350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 83563, rend_intergenic: 79918 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88002, rend_intergenic: 83644 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102505, rend_intergenic: 91114 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 109195, rend_intergenic: 103622 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121904, rend_intergenic: 111226 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131102, rend_intergenic: 121993 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 141471, rend_intergenic: 135191 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153763, rend_intergenic: 143679 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168617, rend_intergenic: 161552 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172315, rend_intergenic: 168752 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181467, rend_intergenic: 177414 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 193966, rend_intergenic: 184534 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203965, rend_intergenic: 196281 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207364, rend_intergenic: 205628 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213735, rend_intergenic: 207402 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 227072, rend_intergenic: 214376 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 239442, rend_intergenic: 227127 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 248489, rend_intergenic: 242690 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 291096, rend_intergenic: 249539 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 299773, rend_intergenic: 291785 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 318907, rend_intergenic: 309156 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 321379 -exon list size: 1567 building trellis 0.1 0.1 0.2 0.3 0.3 0.4 0.4 0.5 0.6 0.6 0.7 0.8 0.8 0.9 1.0 1.0 1.1 1.1 1.2 1.3 1.3 1.4 1.5 1.5 1.6 1.7 1.7 1.8 1.8 1.9 2.0 2.0 2.1 2.2 2.2 2.3 2.4 2.4 2.5 2.5 2.6 2.7 2.7 2.8 2.9 2.9 3.0 3.1 3.1 3.2 3.3 3.3 3.4 3.4 3.5 3.6 3.6 3.7 3.8 3.8 3.9 4.0 4.0 4.1 4.1 4.2 4.3 4.3 4.4 4.5 4.5 4.6 4.7 4.7 4.8 4.8 4.9 5.0 5.0 5.1 5.2 5.2 5.3 5.4 5.4 5.5 5.5 5.6 5.7 5.7 5.8 5.9 5.9 6.0 6.1 6.1 6.2 6.2 6.3 6.4 6.4 6.5 6.6 6.6 6.7 6.8 6.8 6.9 6.9 7.0 7.1 7.1 7.2 7.3 7.3 7.4 7.5 7.5 7.6 7.6 7.7 7.8 7.8 7.9 8.0 8.0 8.1 8.2 8.2 8.3 8.3 8.4 8.5 8.5 8.6 8.7 8.7 8.8 8.9 8.9 9.0 9.1 9.1 9.2 9.2 9.3 9.4 9.4 9.5 9.6 9.6 9.7 9.8 9.8 9.9 9.9 10.0 10.1 10.1 10.2 10.3 10.3 10.4 10.5 10.5 10.6 10.6 10.7 10.8 10.8 10.9 11.0 11.0 11.1 11.2 11.2 11.3 11.3 11.4 11.5 11.5 11.6 11.7 11.7 11.8 11.9 11.9 12.0 12.0 12.1 12.2 12.2 12.3 12.4 12.4 12.5 12.6 12.6 12.7 12.7 12.8 12.9 12.9 13.0 13.1 13.1 13.2 13.3 13.3 13.4 13.4 13.5 13.6 13.6 13.7 13.8 13.8 13.9 14.0 14.0 14.1 14.1 14.2 14.3 14.3 14.4 14.5 14.5 14.6 14.7 14.7 14.8 14.9 14.9 15.0 15.0 15.1 15.2 15.2 15.3 15.4 15.4 15.5 15.6 15.6 15.7 15.7 15.8 15.9 15.9 16.0 16.1 16.1 16.2 16.3 16.3 16.4 16.4 16.5 16.6 16.6 16.7 16.8 16.8 16.9 17.0 17.0 17.1 17.1 17.2 17.3 17.3 17.4 17.5 17.5 17.6 17.7 17.7 17.8 17.8 17.9 18.0 18.0 18.1 18.2 18.2 18.3 18.4 18.4 18.5 18.5 18.6 18.7 18.7 18.8 18.9 18.9 19.0 19.1 19.1 19.2 19.2 19.3 19.4 19.4 19.5 19.6 19.6 19.7 19.8 19.8 19.9 19.9 20.0 20.1 20.1 20.2 20.3 20.3 20.4 20.5 20.5 20.6 20.7 20.7 20.8 20.8 20.9 21.0 21.0 21.1 21.2 21.2 21.3 21.4 21.4 21.5 21.5 21.6 21.7 21.7 21.8 21.9 21.9 22.0 22.1 22.1 22.2 22.2 22.3 22.4 22.4 22.5 22.6 22.6 22.7 22.8 22.8 22.9 22.9 23.0 23.1 23.1 23.2 23.3 23.3 23.4 23.5 23.5 23.6 23.6 23.7 23.8 23.8 23.9 24.0 24.0 24.1 24.2 24.2 24.3 24.3 24.4 24.5 24.5 24.6 24.7 24.7 24.8 24.9 24.9 25.0 25.0 25.1 25.2 25.2 25.3 25.4 25.4 25.5 25.6 25.6 25.7 25.7 25.8 25.9 25.9 26.0 26.1 26.1 26.2 26.3 26.3 26.4 26.4 26.5 26.6 26.6 26.7 26.8 26.8 26.9 27.0 27.0 27.1 27.2 27.2 27.3 27.3 27.4 27.5 27.5 27.6 27.7 27.7 27.8 27.9 27.9 28.0 28.0 28.1 28.2 28.2 28.3 28.4 28.4 28.5 28.6 28.6 28.7 28.7 28.8 28.9 28.9 29.0 29.1 29.1 29.2 29.3 29.3 29.4 29.4 29.5 29.6 29.6 29.7 29.8 29.8 29.9 30.0 30.0 30.1 30.1 30.2 30.3 30.3 30.4 30.5 30.5 30.6 30.7 30.7 30.8 30.8 30.9 31.0 31.0 31.1 31.2 31.2 31.3 31.4 31.4 31.5 31.5 31.6 31.7 31.7 31.8 31.9 31.9 32.0 32.1 32.1 32.2 32.2 32.3 32.4 32.4 32.5 32.6 32.6 32.7 32.8 32.8 32.9 33.0 33.0 33.1 33.1 33.2 33.3 33.3 33.4 33.5 33.5 33.6 33.7 33.7 33.8 33.8 33.9 34.0 34.0 34.1 34.2 34.2 34.3 34.4 34.4 34.5 34.5 34.6 34.7 34.7 34.8 34.9 34.9 35.0 35.1 35.1 35.2 35.2 35.3 35.4 35.4 35.5 35.6 35.6 35.7 35.8 35.8 35.9 35.9 36.0 36.1 36.1 36.2 36.3 36.3 36.4 36.5 36.5 36.6 36.6 36.7 36.8 36.8 36.9 37.0 37.0 37.1 37.2 37.2 37.3 37.3 37.4 37.5 37.5 37.6 37.7 37.7 37.8 37.9 37.9 38.0 38.0 38.1 38.2 38.2 38.3 38.4 38.4 38.5 38.6 38.6 38.7 38.8 38.8 38.9 38.9 39.0 39.1 39.1 39.2 39.3 39.3 39.4 39.5 39.5 39.6 39.6 39.7 39.8 39.8 39.9 40.0 40.0 40.1 40.2 40.2 40.3 40.3 40.4 40.5 40.5 40.6 40.7 40.7 40.8 40.9 40.9 41.0 41.0 41.1 41.2 41.2 41.3 41.4 41.4 41.5 41.6 41.6 41.7 41.7 41.8 41.9 41.9 42.0 42.1 42.1 42.2 42.3 42.3 42.4 42.4 42.5 42.6 42.6 42.7 42.8 42.8 42.9 43.0 43.0 43.1 43.1 43.2 43.3 43.3 43.4 43.5 43.5 43.6 43.7 43.7 43.8 43.8 43.9 44.0 44.0 44.1 44.2 44.2 44.3 44.4 44.4 44.5 44.6 44.6 44.7 44.7 44.8 44.9 44.9 45.0 45.1 45.1 45.2 45.3 45.3 45.4 45.4 45.5 45.6 45.6 45.7 45.8 45.8 45.9 46.0 46.0 46.1 46.1 46.2 46.3 46.3 46.4 46.5 46.5 46.6 46.7 46.7 46.8 46.8 46.9 47.0 47.0 47.1 47.2 47.2 47.3 47.4 47.4 47.5 47.5 47.6 47.7 47.7 47.8 47.9 47.9 48.0 48.1 48.1 48.2 48.2 48.3 48.4 48.4 48.5 48.6 48.6 48.7 48.8 48.8 48.9 48.9 49.0 49.1 49.1 49.2 49.3 49.3 49.4 49.5 49.5 49.6 49.6 49.7 49.8 49.8 49.9 50.0 50.0 50.1 50.2 50.2 50.3 50.4 50.4 50.5 50.5 50.6 50.7 50.7 50.8 50.9 50.9 51.0 51.1 51.1 51.2 51.2 51.3 51.4 51.4 51.5 51.6 51.6 51.7 51.8 51.8 51.9 51.9 52.0 52.1 52.1 52.2 52.3 52.3 52.4 52.5 52.5 52.6 52.6 52.7 52.8 52.8 52.9 53.0 53.0 53.1 53.2 53.2 53.3 53.3 53.4 53.5 53.5 53.6 53.7 53.7 53.8 53.9 53.9 54.0 54.0 54.1 54.2 54.2 54.3 54.4 54.4 54.5 54.6 54.6 54.7 54.7 54.8 54.9 54.9 55.0 55.1 55.1 55.2 55.3 55.3 55.4 55.4 55.5 55.6 55.6 55.7 55.8 55.8 55.9 56.0 56.0 56.1 56.2 56.2 56.3 56.3 56.4 56.5 56.5 56.6 56.7 56.7 56.8 56.9 56.9 57.0 57.0 57.1 57.2 57.2 57.3 57.4 57.4 57.5 57.6 57.6 57.7 57.7 57.8 57.9 57.9 58.0 58.1 58.1 58.2 58.3 58.3 58.4 58.4 58.5 58.6 58.6 58.7 58.8 58.8 58.9 59.0 59.0 59.1 59.1 59.2 59.3 59.3 59.4 59.5 59.5 59.6 59.7 59.7 59.8 59.8 59.9 60.0 60.0 60.1 60.2 60.2 60.3 60.4 60.4 60.5 60.5 60.6 60.7 60.7 60.8 60.9 60.9 61.0 61.1 61.1 61.2 61.2 61.3 61.4 61.4 61.5 61.6 61.6 61.7 61.8 61.8 61.9 62.0 62.0 62.1 62.1 62.2 62.3 62.3 62.4 62.5 62.5 62.6 62.7 62.7 62.8 62.8 62.9 63.0 63.0 63.1 63.2 63.2 63.3 63.4 63.4 63.5 63.5 63.6 63.7 63.7 63.8 63.9 63.9 64.0 64.1 64.1 64.2 64.2 64.3 64.4 64.4 64.5 64.6 64.6 64.7 64.8 64.8 64.9 64.9 65.0 65.1 65.1 65.2 65.3 65.3 65.4 65.5 65.5 65.6 65.6 65.7 65.8 65.8 65.9 66.0 66.0 66.1 66.2 66.2 66.3 66.3 66.4 66.5 66.5 66.6 66.7 66.7 66.8 66.9 66.9 67.0 67.0 67.1 67.2 67.2 67.3 67.4 67.4 67.5 67.6 67.6 67.7 67.8 67.8 67.9 67.9 68.0 68.1 68.1 68.2 68.3 68.3 68.4 68.5 68.5 68.6 68.6 68.7 68.8 68.8 68.9 69.0 69.0 69.1 69.2 69.2 69.3 69.3 69.4 69.5 69.5 69.6 69.7 69.7 69.8 69.9 69.9 70.0 70.0 70.1 70.2 70.2 70.3 70.4 70.4 70.5 70.6 70.6 70.7 70.7 70.8 70.9 70.9 71.0 71.1 71.1 71.2 71.3 71.3 71.4 71.4 71.5 71.6 71.6 71.7 71.8 71.8 71.9 72.0 72.0 72.1 72.1 72.2 72.3 72.3 72.4 72.5 72.5 72.6 72.7 72.7 72.8 72.8 72.9 73.0 73.0 73.1 73.2 73.2 73.3 73.4 73.4 73.5 73.6 73.6 73.7 73.7 73.8 73.9 73.9 74.0 74.1 74.1 74.2 74.3 74.3 74.4 74.4 74.5 74.6 74.6 74.7 74.8 74.8 74.9 75.0 75.0 75.1 75.1 75.2 75.3 75.3 75.4 75.5 75.5 75.6 75.7 75.7 75.8 75.8 75.9 76.0 76.0 76.1 76.2 76.2 76.3 76.4 76.4 76.5 76.5 76.6 76.7 76.7 76.8 76.9 76.9 77.0 77.1 77.1 77.2 77.2 77.3 77.4 77.4 77.5 77.6 77.6 77.7 77.8 77.8 77.9 77.9 78.0 78.1 78.1 78.2 78.3 78.3 78.4 78.5 78.5 78.6 78.6 78.7 78.8 78.8 78.9 79.0 79.0 79.1 79.2 79.2 79.3 79.3 79.4 79.5 79.5 79.6 79.7 79.7 79.8 79.9 79.9 80.0 80.1 80.1 80.2 80.2 80.3 80.4 80.4 80.5 80.6 80.6 80.7 80.8 80.8 80.9 80.9 81.0 81.1 81.1 81.2 81.3 81.3 81.4 81.5 81.5 81.6 81.6 81.7 81.8 81.8 81.9 82.0 82.0 82.1 82.2 82.2 82.3 82.3 82.4 82.5 82.5 82.6 82.7 82.7 82.8 82.9 82.9 83.0 83.0 83.1 83.2 83.2 83.3 83.4 83.4 83.5 83.6 83.6 83.7 83.7 83.8 83.9 83.9 84.0 84.1 84.1 84.2 84.3 84.3 84.4 84.4 84.5 84.6 84.6 84.7 84.8 84.8 84.9 85.0 85.0 85.1 85.1 85.2 85.3 85.3 85.4 85.5 85.5 85.6 85.7 85.7 85.8 85.9 85.9 86.0 86.0 86.1 86.2 86.2 86.3 86.4 86.4 86.5 86.6 86.6 86.7 86.7 86.8 86.9 86.9 87.0 87.1 87.1 87.2 87.3 87.3 87.4 87.4 87.5 87.6 87.6 87.7 87.8 87.8 87.9 88.0 88.0 88.1 88.1 88.2 88.3 88.3 88.4 88.5 88.5 88.6 88.7 88.7 88.8 88.8 88.9 89.0 89.0 89.1 89.2 89.2 89.3 89.4 89.4 89.5 89.5 89.6 89.7 89.7 89.8 89.9 89.9 90.0 90.1 90.1 90.2 90.2 90.3 90.4 90.4 90.5 90.6 90.6 90.7 90.8 90.8 90.9 90.9 91.0 91.1 91.1 91.2 91.3 91.3 91.4 91.5 91.5 91.6 91.7 91.7 91.8 91.8 91.9 92.0 92.0 92.1 92.2 92.2 92.3 92.4 92.4 92.5 92.5 92.6 92.7 92.7 92.8 92.9 92.9 93.0 93.1 93.1 93.2 93.2 93.3 93.4 93.4 93.5 93.6 93.6 93.7 93.8 93.8 93.9 93.9 94.0 94.1 94.1 94.2 94.3 94.3 94.4 94.5 94.5 94.6 94.6 94.7 94.8 94.8 94.9 95.0 95.0 95.1 95.2 95.2 95.3 95.3 95.4 95.5 95.5 95.6 95.7 95.7 95.8 95.9 95.9 96.0 96.0 96.1 96.2 96.2 96.3 96.4 96.4 96.5 96.6 96.6 96.7 96.7 96.8 96.9 96.9 97.0 97.1 97.1 97.2 97.3 97.3 97.4 97.5 97.5 97.6 97.6 97.7 97.8 97.8 97.9 98.0 98.0 98.1 98.2 98.2 98.3 98.3 98.4 98.5 98.5 98.6 98.7 98.7 98.8 98.9 98.9 99.0 99.0 99.1 99.2 99.2 99.3 99.4 99.4 99.5 99.6 99.6 99.7 99.7 99.8 99.9 99.9 -found 51 predictions from path traversal Error with prediction: snap lend_intergenic: 19452, rend_intergenic: 3234 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 31087, rend_intergenic: 19555 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 32151, rend_intergenic: 31089 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 34862, rend_intergenic: 32357 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 42141, rend_intergenic: 34975 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 50466, rend_intergenic: 43021 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 55782, rend_intergenic: 50557 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 64044, rend_intergenic: 59102 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 71054, rend_intergenic: 65745 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 75216, rend_intergenic: 71147 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 78355, rend_intergenic: 76350 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 83563, rend_intergenic: 79918 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 88002, rend_intergenic: 83644 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102505, rend_intergenic: 91114 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 109195, rend_intergenic: 103622 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 121904, rend_intergenic: 111226 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 131102, rend_intergenic: 121993 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 141471, rend_intergenic: 135191 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153763, rend_intergenic: 143679 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 168617, rend_intergenic: 161552 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172315, rend_intergenic: 168752 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 181467, rend_intergenic: 177414 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 193966, rend_intergenic: 184534 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 203965, rend_intergenic: 196281 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 207364, rend_intergenic: 205628 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 213735, rend_intergenic: 207402 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 227072, rend_intergenic: 214376 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 239442, rend_intergenic: 227127 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 248489, rend_intergenic: 242690 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 291096, rend_intergenic: 249539 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 299773, rend_intergenic: 291785 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 318907, rend_intergenic: 309156 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 23 predictions persist after filtering for low support