-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_4/scaffold_4_16662605-16810350

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.18217_t
Valid prediction for GlimmerHMM_glimmerT_11136-T1
Valid prediction for Augustus_model.g7355.t1
Valid prediction for snap_scaffold_4-snap.3400-T1
Valid prediction for GeneMark_model.18195_t
Couldn't classify 22733, 22750
Sorry, prediction pasa_asmbl_43335.p1 fails validation.
(GGA)	 AG	22733-22750	GT	TGG
(GAT)	 AG	22918-22996	GT	CAG
(TAC)	 AG	23077-23211	GT	AGG
(CGA)	 AG	23568-23642	GT	AGG
(TGT)	 AG	24147-24355	GT	AGG
(GTT)	 AG	24526-24743	GT	GGG
(ATT)	 AG	24852-25194	AA	GAA
-recovered pasa_asmbl_43335.p1, terminal, 24852, 25194
-recovered pasa_asmbl_43335.p1, internal, 22733, 22750
-recovered pasa_asmbl_43335.p1, internal, 22918, 22996
-recovered pasa_asmbl_43335.p1, internal, 23077, 23211
-recovered pasa_asmbl_43335.p1, internal, 23568, 23642
-recovered pasa_asmbl_43335.p1, internal, 24147, 24355
-recovered pasa_asmbl_43335.p1, internal, 24526, 24743
Valid prediction for GeneMark_model.18206_t
Valid prediction for GlimmerHMM_glimmerT_11138-T1
Valid prediction for GlimmerHMM_glimmerT_11145-T1
Couldn't classify 14247, 14384
Sorry, prediction pasa_asmbl_43334.p1 fails validation.
(CCA)	 CC	14247-14384	GT	AGG
(ATC)	 AG	14554-14734	GT	AGG
(ACT)	 AG	14859-14981	GT	AGG
(TGA)	 AG	15384-15577	GT	TGG
(ATT)	 AG	16308-16455	GT	AGG
(CTA)	 AG	16675-16796	GT	CAG
(CGC)	 AG	17034-17115	GT	ACG
(CTG)	 AG	17328-17459	GT	CGG
(ATA)	 AG	17836-17910	GT	AGG
(TGT)	 AG	17986-18785	AC	GAA
-recovered pasa_asmbl_43334.p1, terminal, 17986, 18785
-recovered pasa_asmbl_43334.p1, internal, 14554, 14734
-recovered pasa_asmbl_43334.p1, internal, 14859, 14981
-recovered pasa_asmbl_43334.p1, internal, 15384, 15577
-recovered pasa_asmbl_43334.p1, internal, 16308, 16455
-recovered pasa_asmbl_43334.p1, internal, 16675, 16796
-recovered pasa_asmbl_43334.p1, internal, 17034, 17115
-recovered pasa_asmbl_43334.p1, internal, 17328, 17459
-recovered pasa_asmbl_43334.p1, internal, 17836, 17910
Valid prediction for CodingQuarry_transcript_49186-T1
Valid prediction for snap_scaffold_4-snap.3421-T1
Valid prediction for GeneMark_model.18211_t
Valid prediction for GeneMark_model.18201_t
Valid prediction for GlimmerHMM_glimmerT_11152-T1
Valid prediction for GeneMark_model.18199_t
Valid prediction for HiQ_model.g7351.t1
Valid prediction for GeneMark_model.18220_t
Valid prediction for GeneMark_model.18234_t
Valid prediction for snap_scaffold_4-snap.3412-T1
Valid prediction for Augustus_model.g7359.t1
Valid prediction for snap_scaffold_4-snap.3404-T1
Valid prediction for snap_scaffold_4-snap.3394-T1
Valid prediction for GeneMark_model.18219_t
Valid prediction for GeneMark_model.18200_t
Valid prediction for GeneMark_model.18225_t
Valid prediction for snap_scaffold_4-snap.3408-T1
Valid prediction for GeneMark_model.18236_t
Couldn't classify 33032, 33137
Couldn't classify 34210, 34254
Sorry, prediction pasa_asmbl_43338.p1 fails validation.
(CTG)	 GT	33032-33137	GT	AAG
(CAC)	 AG	33534-33670	GT	GGG
(GAG)	 AG	33821-33847	GT	GGG
(TGG)	 AG	33969-34094	GT	GTG
(GAG)	 AG	34210-34254	CA	GCC
-recovered pasa_asmbl_43338.p1, internal, 33534, 33670
-recovered pasa_asmbl_43338.p1, internal, 33821, 33847
-recovered pasa_asmbl_43338.p1, internal, 33969, 34094
Valid prediction for GeneMark_model.18232_t
Valid prediction for snap_scaffold_4-snap.3416-T1
Valid prediction for GeneMark_model.18222_t
Valid prediction for snap_scaffold_4-snap.3413-T1
Valid prediction for GeneMark_model.18238_t
Valid prediction for Augustus_model.g7354.t1
Valid prediction for GeneMark_model.18215_t
Valid prediction for snap_scaffold_4-snap.3397-T1
Valid prediction for GeneMark_model.18203_t
Valid prediction for snap_scaffold_4-snap.3418-T1
Valid prediction for GeneMark_model.18208_t
Valid prediction for GeneMark_model.18191_t
Valid prediction for GeneMark_model.18193_t
Valid prediction for GlimmerHMM_glimmerT_11141-T1
Valid prediction for GeneMark_model.18213_t
Valid prediction for snap_scaffold_4-snap.3420-T1
Couldn't classify 26460, 26658
Couldn't classify 27349, 27497
Sorry, prediction pasa_asmbl_43336.p1 fails validation.
(CGC)	 GC	26460-26658	GT	GGG
(TGG)	 AG	26885-27085	GT	CGG
(TAC)	 AG	27349-27497	AT	TCA
-recovered pasa_asmbl_43336.p1, internal, 26885, 27085
Valid prediction for snap_scaffold_4-snap.3399-T1
Valid prediction for GeneMark_model.18189_t
Valid prediction for HiQ_model.g7353.t1
Valid prediction for snap_scaffold_4-snap.3395-T1
Valid prediction for GeneMark_model.18230_t
Valid prediction for snap_scaffold_4-snap.3402-T1
Valid prediction for GlimmerHMM_glimmerT_11149-T1
Valid prediction for GeneMark_model.18228_t
Valid prediction for pasa_asmbl_43332.p1
Valid prediction for snap_scaffold_4-snap.3390-T1
Valid prediction for Augustus_model.g7358.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.18221_t
Valid prediction for snap_scaffold_4-snap.3422-T1
Valid prediction for HiQ_model.g7365.t1
Valid prediction for Augustus_model.g7356.t1
Valid prediction for GeneMark_model.18239_t
Valid prediction for GeneMark_model.18216_t
Valid prediction for GeneMark_model.18233_t
Valid prediction for GlimmerHMM_glimmerT_11150-T1
Valid prediction for Augustus_model.g7360.t1
Valid prediction for GlimmerHMM_glimmerT_11151-T1
Valid prediction for CodingQuarry_transcript_49192-T1
Valid prediction for GeneMark_model.18212_t
Valid prediction for GlimmerHMM_glimmerT_11157-T1
Valid prediction for snap_scaffold_4-snap.3401-T1
Sorry, intron length (9) is less than minimum required (10)
Couldn't classify 5405, 5471
Sorry, prediction pasa_asmbl_41964.p1 fails validation.
(CCG)	 CA	5405-5471	GT	CAG
(GTA)	 AG	5846-5917	GT	AGG
(ATC)	 AG	6104-6270	GT	TGG
(GTG)	 AG	6707-6821	GT	AAG
(GCG)	 AG	6912-7026	GT	CCG
(AGG)	 AG	7153-7297	GT	ACG
(TGT)	 AG	7413-7474	GT	TGG
(GTA)	 AG	7677-7716	GA	AAG
-recovered pasa_asmbl_41964.p1, terminal, 7677, 7716
-recovered pasa_asmbl_41964.p1, internal, 5846, 5917
-recovered pasa_asmbl_41964.p1, internal, 6104, 6270
-recovered pasa_asmbl_41964.p1, internal, 6707, 6821
-recovered pasa_asmbl_41964.p1, internal, 6912, 7026
-recovered pasa_asmbl_41964.p1, internal, 7153, 7297
-recovered pasa_asmbl_41964.p1, internal, 7413, 7474
Valid prediction for CodingQuarry_transcript_49194-T1
Valid prediction for Augustus_model.g7366.t1
Valid prediction for snap_scaffold_4-snap.3410-T1
Valid prediction for GeneMark_model.18204_t
Valid prediction for snap_scaffold_4-snap.3415-T1
Valid prediction for snap_scaffold_4-snap.3396-T1
Valid prediction for snap_scaffold_4-snap.3406-T1
Couldn't classify 20632, 20643
Couldn't classify 29382, 29519
Sorry, prediction pasa_asmbl_41963.p1 fails validation.
(GAC)	 CT	20632-20643	GT	GGG
(CAA)	 AG	21068-21143	GT	AGG
(GTG)	 AG	21374-21583	GT	AGG
(TGA)	 AG	21954-22108	GT	AGG
(CAA)	 AG	22853-22964	GT	CGG
(AGG)	 AG	23621-23744	GT	AGG
(CCC)	 AG	23917-24072	GT	AGG
(GCT)	 AG	26110-26287	GT	AGG
(GAC)	 AG	27408-27502	GT	AAG
(GCA)	 AG	28096-28176	GT	AAG
(GAC)	 AG	28907-29090	GT	GGG
(GCC)	 AG	29382-29519	GG	GGG
-recovered pasa_asmbl_41963.p1, internal, 21068, 21143
-recovered pasa_asmbl_41963.p1, internal, 21374, 21583
-recovered pasa_asmbl_41963.p1, internal, 21954, 22108
-recovered pasa_asmbl_41963.p1, internal, 22853, 22964
-recovered pasa_asmbl_41963.p1, internal, 23621, 23744
-recovered pasa_asmbl_41963.p1, internal, 23917, 24072
-recovered pasa_asmbl_41963.p1, internal, 26110, 26287
-recovered pasa_asmbl_41963.p1, internal, 27408, 27502
-recovered pasa_asmbl_41963.p1, internal, 28096, 28176
-recovered pasa_asmbl_41963.p1, internal, 28907, 29090
Valid prediction for snap_scaffold_4-snap.3419-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.18223_t
Valid prediction for HiQ_model.g7352.t1
Valid prediction for GeneMark_model.18231_t
Valid prediction for HiQ_model.g7368.t1
Valid prediction for GeneMark_model.18202_t
Valid prediction for GlimmerHMM_glimmerT_11146-T1
Valid prediction for GlimmerHMM_glimmerT_11140-T1
Valid prediction for GeneMark_model.18224_t
Valid prediction for GlimmerHMM_glimmerT_11142-T1
Valid prediction for HiQ_model.g7369.t1
Valid prediction for snap_scaffold_4-snap.3398-T1
Valid prediction for GlimmerHMM_glimmerT_11156-T1
Valid prediction for GlimmerHMM_glimmerT_11144-T1
Valid prediction for GlimmerHMM_glimmerT_11147-T1
Valid prediction for Augustus_model.g7362.t1
Valid prediction for GeneMark_model.18229_t
Valid prediction for snap_scaffold_4-snap.3392-T1
Valid prediction for CodingQuarry_transcript_49193-T1
Valid prediction for GeneMark_model.18235_t
Valid prediction for snap_scaffold_4-snap.3407-T1
Valid prediction for pasa_asmbl_41968.p1
Valid prediction for CodingQuarry_transcript_49187-T1
Valid prediction for snap_scaffold_4-snap.3417-T1
Valid prediction for pasa_asmbl_41954.p1
Valid prediction for Augustus_model.g7364.t1
Valid prediction for snap_scaffold_4-snap.3423-T1
Valid prediction for Augustus_model.g7363.t1
Valid prediction for snap_scaffold_4-snap.3409-T1
Valid prediction for GeneMark_model.18190_t
Valid prediction for GeneMark_model.18194_t
Valid prediction for GlimmerHMM_glimmerT_11139-T1
Valid prediction for GeneMark_model.18218_t
Couldn't classify 7655, 7676
Sorry, prediction CodingQuarry_transcript_49191-T1 fails validation.
(ATG)	 CC	6253-6270	GT	TGG
(GTG)	 AG	6707-6821	GT	AAG
(GCG)	 AG	6912-7026	GT	CCG
(AGG)	 AG	7153-7297	GT	ACG
(TGT)	 AG	7413-7474	GT	TGG
(TTT)	 TG	7655-7676	GT	AGG
-recovered CodingQuarry_transcript_49191-T1, initial, 6253, 6270
-recovered CodingQuarry_transcript_49191-T1, internal, 6707, 6821
-recovered CodingQuarry_transcript_49191-T1, internal, 6912, 7026
-recovered CodingQuarry_transcript_49191-T1, internal, 7153, 7297
-recovered CodingQuarry_transcript_49191-T1, internal, 7413, 7474
Couldn't classify 88686, 88691
Sorry, prediction pasa_asmbl_41958.p1 fails validation.
(GCC)	 GA	88686-88691	GT	TGG
(TTG)	 AG	89182-89319	GT	AGG
(CAT)	 AG	89417-89536	GT	AAG
(GTG)	 AG	89663-89795	GT	CTG
(GTT)	 AG	90283-90398	GT	AGG
(GAG)	 AG	90500-90568	GT	AGG
(TCC)	 AG	92933-92992	AG	GAA
-recovered pasa_asmbl_41958.p1, terminal, 92933, 92992
-recovered pasa_asmbl_41958.p1, internal, 89182, 89319
-recovered pasa_asmbl_41958.p1, internal, 89417, 89536
-recovered pasa_asmbl_41958.p1, internal, 89663, 89795
-recovered pasa_asmbl_41958.p1, internal, 90283, 90398
-recovered pasa_asmbl_41958.p1, internal, 90500, 90568
Valid prediction for GeneMark_model.18192_t
Couldn't classify 2097, 2192
Couldn't classify 2261, 2296
Sorry, prediction CodingQuarry_transcript_49195-T1 fails validation.
(ATG)	 TC	629-734	GT	GGG
(AGG)	 AG	879-921	GT	CGG
(TGC)	 AG	1053-1120	GT	AGG
(GAT)	 AG	1253-1527	GT	AAG
(CTC)	 AG	1636-1837	GT	AGG
(CCG)	 AG	2097-2192	AT	GGA
(ATC)	 TC	2261-2296	GT	AGG
(CTG)	 AG	2442-2449	TT	GAT
-recovered CodingQuarry_transcript_49195-T1, initial, 629, 734
-recovered CodingQuarry_transcript_49195-T1, terminal, 2442, 2449
-recovered CodingQuarry_transcript_49195-T1, internal, 879, 921
-recovered CodingQuarry_transcript_49195-T1, internal, 1053, 1120
-recovered CodingQuarry_transcript_49195-T1, internal, 1253, 1527
-recovered CodingQuarry_transcript_49195-T1, internal, 1636, 1837
Valid prediction for GeneMark_model.18226_t
Valid prediction for HiQ_model.g7361.t1
Valid prediction for GlimmerHMM_glimmerT_11153-T1
Valid prediction for GeneMark_model.18227_t
Valid prediction for pasa_asmbl_42331.p1
Valid prediction for CodingQuarry_transcript_49188-T1
Valid prediction for snap_scaffold_4-snap.3391-T1
Valid prediction for CodingQuarry_transcript_49190-T1
Valid prediction for GlimmerHMM_glimmerT_11148-T1
Valid prediction for GeneMark_model.18214_t
Valid prediction for pasa_asmbl_41955.p1
Valid prediction for HiQ_model.g7357.t1
Valid prediction for snap_scaffold_4-snap.3403-T1
Valid prediction for GlimmerHMM_glimmerT_11154-T1
Valid prediction for GeneMark_model.18209_t
Valid prediction for GeneMark_model.18198_t
Valid prediction for GlimmerHMM_glimmerT_11137-T1
Valid prediction for snap_scaffold_4-snap.3414-T1
Valid prediction for snap_scaffold_4-snap.3393-T1
Valid prediction for GeneMark_model.18205_t
Valid prediction for snap_scaffold_4-snap.3405-T1
Valid prediction for CodingQuarry_transcript_49189-T1
Valid prediction for GlimmerHMM_glimmerT_11143-T1
Valid prediction for Augustus_model.g7367.t1
Valid prediction for GeneMark_model.18197_t
Valid prediction for snap_scaffold_4-snap.3411-T1
Valid prediction for GlimmerHMM_glimmerT_11155-T1
Valid prediction for GeneMark_model.18237_t
Valid prediction for GeneMark_model.18207_t
Valid prediction for pasa_asmbl_41961.p1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 4456, rend_intergenic: 4228  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 12422, rend_intergenic: 11326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25194, rend_intergenic: 18630  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34257, rend_intergenic: 30940  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47531, rend_intergenic: 45715  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48768, rend_intergenic: 47651  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54016, rend_intergenic: 51867  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69035, rend_intergenic: 64479  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93918, rend_intergenic: 85238  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98595, rend_intergenic: 95242  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104323, rend_intergenic: 99630  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124928, rend_intergenic: 113552  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138590, rend_intergenic: 125424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 147746
-exon list size: 715


building trellis

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46.0    
46.2    
46.3    
46.4    
46.6    
46.7    
46.9    
47.0    
47.1    
47.3    
47.4    
47.6    
47.7    
47.8    
48.0    
48.1    
48.3    
48.4    
48.5    
48.7    
48.8    
49.0    
49.1    
49.2    
49.4    
49.5    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.5    
50.6    
50.8    
50.9    
51.0    
51.2    
51.3    
51.5    
51.6    
51.7    
51.9    
52.0    
52.2    
52.3    
52.4    
52.6    
52.7    
52.9    
53.0    
53.1    
53.3    
53.4    
53.6    
53.7    
53.8    
54.0    
54.1    
54.3    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.8    
55.9    
56.1    
56.2    
56.3    
56.5    
56.6    
56.8    
56.9    
57.0    
57.2    
57.3    
57.5    
57.6    
57.7    
57.9    
58.0    
58.2    
58.3    
58.4    
58.6    
58.7    
58.9    
59.0    
59.1    
59.3    
59.4    
59.6    
59.7    
59.8    
60.0    
60.1    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.4    
61.5    
61.6    
61.8    
61.9    
62.1    
62.2    
62.3    
62.5    
62.6    
62.8    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.7    
63.9    
64.0    
64.2    
64.3    
64.4    
64.6    
64.7    
64.9    
65.0    
65.1    
65.3    
65.4    
65.6    
65.7    
65.8    
66.0    
66.1    
66.2    
66.4    
66.5    
66.7    
66.8    
66.9    
67.1    
67.2    
67.4    
67.5    
67.6    
67.8    
67.9    
68.1    
68.2    
68.3    
68.5    
68.6    
68.8    
68.9    
69.0    
69.2    
69.3    
69.5    
69.6    
69.7    
69.9    
70.0    
70.2    
70.3    
70.4    
70.6    
70.7    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.7    
71.8    
72.0    
72.1    
72.2    
72.4    
72.5    
72.7    
72.8    
72.9    
73.1    
73.2    
73.4    
73.5    
73.6    
73.8    
73.9    
74.1    
74.2    
74.3    
74.5    
74.6    
74.8    
74.9    
75.0    
75.2    
75.3    
75.5    
75.6    
75.7    
75.9    
76.0    
76.2    
76.3    
76.4    
76.6    
76.7    
76.8    
77.0    
77.1    
77.3    
77.4    
77.5    
77.7    
77.8    
78.0    
78.1    
78.2    
78.4    
78.5    
78.7    
78.8    
78.9    
79.1    
79.2    
79.4    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.3    
80.5    
80.6    
80.8    
80.9    
81.0    
81.2    
81.3    
81.5    
81.6    
81.7    
81.9    
82.0    
82.1    
82.3    
82.4    
82.6    
82.7    
82.8    
83.0    
83.1    
83.3    
83.4    
83.5    
83.7    
83.8    
84.0    
84.1    
84.2    
84.4    
84.5    
84.7    
84.8    
84.9    
85.1    
85.2    
85.4    
85.5    
85.6    
85.8    
85.9    
86.1    
86.2    
86.3    
86.5    
86.6    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.6    
87.7    
87.9    
88.0    
88.1    
88.3    
88.4    
88.6    
88.7    
88.8    
89.0    
89.1    
89.3    
89.4    
89.5    
89.7    
89.8    
90.0    
90.1    
90.2    
90.4    
90.5    
90.7    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.6    
91.8    
91.9    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.9    
93.0    
93.2    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.1    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.3    
95.4    
95.5    
95.7    
95.8    
96.0    
96.1    
96.2    
96.4    
96.5    
96.7    
96.8    
96.9    
97.1    
97.2    
97.4    
97.5    
97.6    
97.8    
97.9    
98.0    
98.2    
98.3    
98.5    
98.6    
98.7    
98.9    
99.0    
99.2    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 22 predictions from path traversal
Error with prediction: snap lend_intergenic: 4456, rend_intergenic: 4228  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 12422, rend_intergenic: 11326  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 25194, rend_intergenic: 18630  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34257, rend_intergenic: 30940  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47531, rend_intergenic: 45715  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 48768, rend_intergenic: 47651  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 54016, rend_intergenic: 51867  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 69035, rend_intergenic: 64479  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 93918, rend_intergenic: 85238  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 98595, rend_intergenic: 95242  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 104323, rend_intergenic: 99630  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 124928, rend_intergenic: 113552  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138590, rend_intergenic: 125424  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 21 predictions persist after filtering for low support