-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_4/scaffold_4_14397414-14679008 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.17586_t Valid prediction for GeneMark_model.17570_t Valid prediction for Augustus_model.g7152.t1 Valid prediction for Augustus_model.g7146.t1 Couldn't classify 103094, 103213 Sorry, prediction pasa_asmbl_43210.p1 fails validation. (GAC) TC 103094-103213 GT AGG (GTG) AG 104381-104458 GT AGG (GTG) AG 104597-104678 GT AGG (ACG) AG 104828-104893 GT AGG (TGT) AG 106129-106278 GT TGG (TCC) AG 106841-106943 GT AGG (GCA) AG 107218-107362 GT CCG (GAC) AG 107611-107693 GT AGG (GAC) AG 107838-107945 GT CGG (GTC) AG 108113-108258 GT GGG (CAA) AG 109143-109282 CT AAC -recovered pasa_asmbl_43210.p1, terminal, 109143, 109282 -recovered pasa_asmbl_43210.p1, internal, 104381, 104458 -recovered pasa_asmbl_43210.p1, internal, 104597, 104678 -recovered pasa_asmbl_43210.p1, internal, 104828, 104893 -recovered pasa_asmbl_43210.p1, internal, 106129, 106278 -recovered pasa_asmbl_43210.p1, internal, 106841, 106943 -recovered pasa_asmbl_43210.p1, internal, 107218, 107362 -recovered pasa_asmbl_43210.p1, internal, 107611, 107693 -recovered pasa_asmbl_43210.p1, internal, 107838, 107945 -recovered pasa_asmbl_43210.p1, internal, 108113, 108258 Valid prediction for HiQ_model.g7139.t1 Valid prediction for GlimmerHMM_glimmerT_10816-T1 Valid prediction for CodingQuarry_transcript_49122-T1 Valid prediction for CodingQuarry_transcript_49133-T1 Valid prediction for GlimmerHMM_glimmerT_10838-T1 Valid prediction for snap_scaffold_4-snap.2917-T1 Valid prediction for CodingQuarry_transcript_49124-T1 Valid prediction for Augustus_model.g7151.t1 Valid prediction for pasa_asmbl_43230.p1 Valid prediction for Augustus_model.g7134.t1 Valid prediction for CodingQuarry_transcript_49121-T1 Valid prediction for HiQ_model.g7143.t1 Valid prediction for GeneMark_model.17600_t Valid prediction for snap_scaffold_4-snap.2952-T1 Valid prediction for snap_scaffold_4-snap.2922-T1 Valid prediction for snap_scaffold_4-snap.2912-T1 Valid prediction for CodingQuarry_transcript_49132-T1 Valid prediction for HiQ_model.g7153.t1 Valid prediction for GeneMark_model.17565_t Valid prediction for GeneMark_model.17566_t Valid prediction for GeneMark_model.17601_t Valid prediction for Augustus_model.g7154.t1 Valid prediction for GlimmerHMM_glimmerT_10842-T1 Valid prediction for snap_scaffold_4-snap.2923-T1 Valid prediction for GeneMark_model.17564_t Valid prediction for CodingQuarry_transcript_49131-T1 Valid prediction for GeneMark_model.17588_t Valid prediction for GeneMark_model.17582_t Valid prediction for GlimmerHMM_glimmerT_10824-T1 Valid prediction for GlimmerHMM_glimmerT_10819-T1 Valid prediction for GeneMark_model.17591_t Valid prediction for GlimmerHMM_glimmerT_10831-T1 Couldn't classify 143192, 143327 Sorry, prediction pasa_asmbl_43218.p1 fails validation. (GTG) GT 143192-143327 GT AGG (GGT) AG 143911-144039 GT TGG (GTG) AG 144182-144316 GT AGG (GTG) AG 144495-144589 GT AGG (GAA) AG 144688-144858 GT CTG (GAA) AG 145021-145153 GT TGG (GCA) AG 145286-145398 GT AGG (GCC) AG 145544-145689 GT AGG (ACC) AG 145900-145924 GC GAG -recovered pasa_asmbl_43218.p1, terminal, 145900, 145924 -recovered pasa_asmbl_43218.p1, internal, 143911, 144039 -recovered pasa_asmbl_43218.p1, internal, 144182, 144316 -recovered pasa_asmbl_43218.p1, internal, 144495, 144589 -recovered pasa_asmbl_43218.p1, internal, 144688, 144858 -recovered pasa_asmbl_43218.p1, internal, 145021, 145153 -recovered pasa_asmbl_43218.p1, internal, 145286, 145398 -recovered pasa_asmbl_43218.p1, internal, 145544, 145689 -recovered pasa_asmbl_43218.p1, internal, 145900, 145924 Valid prediction for pasa_asmbl_43207.p1 Valid prediction for snap_scaffold_4-snap.2935-T1 Valid prediction for GeneMark_model.17585_t Valid prediction for GlimmerHMM_glimmerT_10825-T1 Valid prediction for snap_scaffold_4-snap.2944-T1 Valid prediction for CodingQuarry_transcript_49125-T1 Valid prediction for GlimmerHMM_glimmerT_10818-T1 Valid prediction for pasa_asmbl_43232.p1 Valid prediction for GlimmerHMM_glimmerT_10814-T1 Valid prediction for GlimmerHMM_glimmerT_10841-T1 Valid prediction for GeneMark_model.17561_t Valid prediction for GlimmerHMM_glimmerT_10826-T1 Valid prediction for GeneMark_model.17576_t Valid prediction for CodingQuarry_transcript_49119-T1 Valid prediction for pasa_asmbl_43213.p1 Valid prediction for GlimmerHMM_glimmerT_10832-T1 Valid prediction for HiQ_model.g7150.t1 Valid prediction for GeneMark_model.17562_t Valid prediction for snap_scaffold_4-snap.2942-T1 Valid prediction for Augustus_model.g7149.t1 Valid prediction for CodingQuarry_transcript_49126-T1 Valid prediction for snap_scaffold_4-snap.2916-T1 Valid prediction for Augustus_model.g7163.t1 Valid prediction for GlimmerHMM_glimmerT_10815-T1 Valid prediction for snap_scaffold_4-snap.2948-T1 Valid prediction for GlimmerHMM_glimmerT_10820-T1 Valid prediction for Augustus_model.g7136.t1 Valid prediction for GeneMark_model.17578_t Valid prediction for HiQ_model.g7159.t1 Valid prediction for pasa_asmbl_43217.p1 Valid prediction for GlimmerHMM_glimmerT_10813-T1 Valid prediction for snap_scaffold_4-snap.2926-T1 Valid prediction for snap_scaffold_4-snap.2940-T1 Valid prediction for snap_scaffold_4-snap.2915-T1 Couldn't classify 184407, 184709 Sorry, prediction pasa_asmbl_43227.p1 fails validation. (GTG) TA 184407-184709 AG AAA Couldn't classify 227109, 227576 Sorry, prediction pasa_asmbl_43235.p1 fails validation. (GTT) CA 227109-227576 AG AAA Valid prediction for Augustus_model.g7140.t1 Valid prediction for snap_scaffold_4-snap.2962-T1 Valid prediction for GeneMark_model.17596_t Valid prediction for pasa_asmbl_43236.p1 Valid prediction for GlimmerHMM_glimmerT_10827-T1 Valid prediction for Augustus_model.g7161.t1 Valid prediction for Augustus_model.g7145.t1 Valid prediction for snap_scaffold_4-snap.2933-T1 Valid prediction for snap_scaffold_4-snap.2929-T1 Valid prediction for snap_scaffold_4-snap.2953-T1 Valid prediction for snap_scaffold_4-snap.2950-T1 Valid prediction for GeneMark_model.17580_t Valid prediction for GeneMark_model.17587_t Couldn't classify 201123, 201387 Couldn't classify 203808, 203834 Sorry, prediction pasa_asmbl_43228.p1 fails validation. (GAG) CT 201123-201387 GT CTG (CTC) AG 201487-201687 GT AGG (GGT) AG 201827-201880 GT GGG (GAA) AG 201969-202076 GT CAG (GCT) AG 202160-202327 GT GAG (ACC) AG 202452-202630 GT AGG (TGT) AG 202891-202990 GT AGG (GCC) AG 203079-203274 GT CAG (GAA) AG 203397-203703 GT GAG (GAG) AG 203808-203834 GC GGG -recovered pasa_asmbl_43228.p1, internal, 201487, 201687 -recovered pasa_asmbl_43228.p1, internal, 201827, 201880 -recovered pasa_asmbl_43228.p1, internal, 201969, 202076 -recovered pasa_asmbl_43228.p1, internal, 202160, 202327 -recovered pasa_asmbl_43228.p1, internal, 202452, 202630 -recovered pasa_asmbl_43228.p1, internal, 202891, 202990 -recovered pasa_asmbl_43228.p1, internal, 203079, 203274 -recovered pasa_asmbl_43228.p1, internal, 203397, 203703 -recovered pasa_asmbl_43228.p1, internal, 203808, 203834 Valid prediction for Augustus_model.g7157.t1 Valid prediction for pasa_asmbl_43205.p1 Valid prediction for snap_scaffold_4-snap.2934-T1 Valid prediction for GeneMark_model.17569_t Valid prediction for GlimmerHMM_glimmerT_10812-T1 Valid prediction for GlimmerHMM_glimmerT_10828-T1 Valid prediction for snap_scaffold_4-snap.2937-T1 Valid prediction for GeneMark_model.17571_t Valid prediction for GeneMark_model.17598_t Valid prediction for GlimmerHMM_glimmerT_10811-T1 Valid prediction for CodingQuarry_transcript_49120-T1 Couldn't classify 182151, 182558 Sorry, prediction pasa_asmbl_43226.p1 fails validation. (CAG) CT 182151-182558 AA GCA Valid prediction for GeneMark_model.17584_t Valid prediction for GlimmerHMM_glimmerT_10833-T1 Valid prediction for snap_scaffold_4-snap.2931-T1 Valid prediction for snap_scaffold_4-snap.2911-T1 Valid prediction for GlimmerHMM_glimmerT_10822-T1 Valid prediction for GlimmerHMM_glimmerT_10823-T1 Valid prediction for GeneMark_model.17560_t Valid prediction for GeneMark_model.17575_t Valid prediction for GeneMark_model.17572_t Valid prediction for GeneMark_model.17593_t Valid prediction for HiQ_model.g7148.t1 Valid prediction for GeneMark_model.17590_t Valid prediction for GlimmerHMM_glimmerT_10810-T1 Valid prediction for HiQ_model.g7138.t1 Couldn't classify 169928, 170074 Sorry, prediction pasa_asmbl_43222.p1 fails validation. (GGT) CA 169928-170074 GT AGG (GTG) AG 170335-170454 GT AGG (GTG) AG 170816-171004 GT AGG (GTG) AG 171267-171414 GT AGG (TTC) AG 172266-172552 GT GGG (ATC) AG 173228-173374 GT AGG (GTG) AG 173494-173634 GT AGG (GAG) AG 174426-174729 GT TGG (GTG) AG 175243-175346 GT AGG (GCT) AG 175592-176218 TA GAT add_exon() Sorry, pasa_asmbl_43222.p1 171267-171414-terminal-3 is invalid. -recovered pasa_asmbl_43222.p1, terminal, 171267, 171414 -recovered pasa_asmbl_43222.p1, terminal, 175592, 176218 -recovered pasa_asmbl_43222.p1, internal, 170335, 170454 -recovered pasa_asmbl_43222.p1, internal, 170816, 171004 -recovered pasa_asmbl_43222.p1, internal, 171267, 171414 -recovered pasa_asmbl_43222.p1, internal, 172266, 172552 -recovered pasa_asmbl_43222.p1, internal, 173228, 173374 -recovered pasa_asmbl_43222.p1, internal, 173494, 173634 -recovered pasa_asmbl_43222.p1, internal, 174426, 174729 -recovered pasa_asmbl_43222.p1, internal, 175243, 175346 Valid prediction for HiQ_model.g7162.t1 Valid prediction for GeneMark_model.17573_t Valid prediction for GlimmerHMM_glimmerT_10836-T1 Valid prediction for pasa_asmbl_43204.p1 Valid prediction for pasa_asmbl_43208.p1 Valid prediction for CodingQuarry_transcript_49123-T1 Valid prediction for pasa_asmbl_43199.p1 Valid prediction for snap_scaffold_4-snap.2913-T1 Valid prediction for Augustus_model.g7135.t1 Valid prediction for GlimmerHMM_glimmerT_10830-T1 Valid prediction for snap_scaffold_4-snap.2954-T1 Valid prediction for HiQ_model.g7164.t1 Valid prediction for HiQ_model.g7137.t1 Valid prediction for snap_scaffold_4-snap.2938-T1 Valid prediction for snap_scaffold_4-snap.2918-T1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_4-snap.2947-T1 Valid prediction for snap_scaffold_4-snap.2951-T1 Valid prediction for CodingQuarry_transcript_49135-T1 Valid prediction for GeneMark_model.17594_t Valid prediction for snap_scaffold_4-snap.2957-T1 Valid prediction for snap_scaffold_4-snap.2945-T1 Valid prediction for Augustus_model.g7160.t1 Valid prediction for snap_scaffold_4-snap.2928-T1 Couldn't classify 46364, 46487 Sorry, prediction pasa_asmbl_41803.p1 fails validation. (GTT) AG 46364-46487 GT AGG (GAG) AG 46643-46816 GC AGG (GAA) AG 48765-48853 GT AGG (CCT) AG 48975-49116 GT AGG (GTG) AG 49225-49349 GT AGG (GTG) AG 49547-49712 GT CGG (GCG) AG 49825-49958 GT AGG (GTC) AG 50190-50420 TT AGT -recovered pasa_asmbl_41803.p1, terminal, 50190, 50420 -recovered pasa_asmbl_41803.p1, internal, 46364, 46487 -recovered pasa_asmbl_41803.p1, internal, 46643, 46816 -recovered pasa_asmbl_41803.p1, internal, 48765, 48853 -recovered pasa_asmbl_41803.p1, internal, 48975, 49116 -recovered pasa_asmbl_41803.p1, internal, 49225, 49349 -recovered pasa_asmbl_41803.p1, internal, 49547, 49712 -recovered pasa_asmbl_41803.p1, internal, 49825, 49958 Valid prediction for snap_scaffold_4-snap.2959-T1 Valid prediction for snap_scaffold_4-snap.2932-T1 Valid prediction for GlimmerHMM_glimmerT_10848-T1 Couldn't classify 14928, 14981 Sorry, prediction pasa_asmbl_41819.p1 fails validation. (ATG) TC 10327-10332 GT AAG (AGC) AG 12025-12151 GT CGG (GGC) AG 12658-12743 GT AGG (ATC) AG 13236-13382 GT AGG (GAT) AG 14116-14340 GT AGG (AAA) AG 14928-14981 TA GGT -recovered pasa_asmbl_41819.p1, initial, 10327, 10332 -recovered pasa_asmbl_41819.p1, internal, 12025, 12151 -recovered pasa_asmbl_41819.p1, internal, 12658, 12743 -recovered pasa_asmbl_41819.p1, internal, 13236, 13382 -recovered pasa_asmbl_41819.p1, internal, 14116, 14340 Valid prediction for GlimmerHMM_glimmerT_10839-T1 Valid prediction for snap_scaffold_4-snap.2927-T1 Valid prediction for snap_scaffold_4-snap.2949-T1 Valid prediction for Augustus_model.g7172.t1 Valid prediction for snap_scaffold_4-snap.2943-T1 Valid prediction for Augustus_model.g7166.t1 Valid prediction for GeneMark_model.17574_t Valid prediction for GlimmerHMM_glimmerT_10834-T1 Valid prediction for CodingQuarry_transcript_49129-T1 Valid prediction for Augustus_model.g7142.t1 Valid prediction for snap_scaffold_4-snap.2958-T1 Valid prediction for Augustus_model.g7169.t1 Valid prediction for GeneMark_model.17563_t Valid prediction for snap_scaffold_4-snap.2955-T1 Valid prediction for snap_scaffold_4-snap.2964-T1 Valid prediction for GeneMark_model.17602_t Valid prediction for Augustus_model.g7167.t1 Valid prediction for GlimmerHMM_glimmerT_10847-T1 Valid prediction for GeneMark_model.17581_t Couldn't classify 133900, 134205 Sorry, prediction pasa_asmbl_43219.p1 fails validation. (GAA) TT 133900-134205 CC AAC Valid prediction for CodingQuarry_transcript_49128-T1 Valid prediction for snap_scaffold_4-snap.2921-T1 Valid prediction for snap_scaffold_4-snap.2956-T1 Valid prediction for Augustus_model.g7144.t1 Valid prediction for GeneMark_model.17559_t Valid prediction for snap_scaffold_4-snap.2961-T1 Valid prediction for HiQ_model.g7156.t1 Valid prediction for GlimmerHMM_glimmerT_10840-T1 Valid prediction for snap_scaffold_4-snap.2960-T1 Valid prediction for pasa_asmbl_41799.p1 Valid prediction for HiQ_model.g7168.t1 Valid prediction for snap_scaffold_4-snap.2914-T1 Valid prediction for HiQ_model.g7171.t1 Valid prediction for snap_scaffold_4-snap.2930-T1 Couldn't classify 90834, 91016 Sorry, prediction pasa_asmbl_41797.p1 fails validation. (AAG) GA 90834-91016 GT AGG (CTA) AG 91719-91823 GT AGG (GTG) AG 92062-92202 GT CGG (GAA) AG 92832-92911 GT AGG (GTA) AG 93289-93400 GT CAG (TGG) AG 94108-94236 GT AGG (GTG) AG 94348-94461 GT AGG (GTG) AG 94611-94713 GT CAG (TGG) AG 94825-95009 GT AGG (GTA) AG 95155-95319 GT AGG (ATC) AG 95630-95787 GT TGG (GAT) AG 96158-96272 GT CGG (GTT) AG 96355-96387 AC AAA -recovered pasa_asmbl_41797.p1, terminal, 96355, 96387 -recovered pasa_asmbl_41797.p1, internal, 91719, 91823 -recovered pasa_asmbl_41797.p1, internal, 92062, 92202 -recovered pasa_asmbl_41797.p1, internal, 92832, 92911 -recovered pasa_asmbl_41797.p1, internal, 93289, 93400 -recovered pasa_asmbl_41797.p1, internal, 94108, 94236 -recovered pasa_asmbl_41797.p1, internal, 94348, 94461 -recovered pasa_asmbl_41797.p1, internal, 94611, 94713 -recovered pasa_asmbl_41797.p1, internal, 94825, 95009 -recovered pasa_asmbl_41797.p1, internal, 95155, 95319 -recovered pasa_asmbl_41797.p1, internal, 95630, 95787 -recovered pasa_asmbl_41797.p1, internal, 96158, 96272 Valid prediction for snap_scaffold_4-snap.2924-T1 Valid prediction for Augustus_model.g7141.t1 Valid prediction for GlimmerHMM_glimmerT_10829-T1 Valid prediction for Augustus_model.g7165.t1 Valid prediction for GeneMark_model.17607_t Valid prediction for CodingQuarry_transcript_49134-T1 Valid prediction for GeneMark_model.17577_t Valid prediction for GlimmerHMM_glimmerT_10835-T1 Valid prediction for GeneMark_model.17606_t Valid prediction for HiQ_model.g7158.t1 Valid prediction for GlimmerHMM_glimmerT_10817-T1 Valid prediction for Augustus_model.g7170.t1 Valid prediction for GlimmerHMM_glimmerT_10850-T1 Valid prediction for GeneMark_model.17579_t Valid prediction for GeneMark_model.17597_t Valid prediction for GeneMark_model.17604_t Valid prediction for GlimmerHMM_glimmerT_10845-T1 Valid prediction for Augustus_model.g7147.t1 Valid prediction for GeneMark_model.17599_t Valid prediction for GeneMark_model.17603_t Valid prediction for GlimmerHMM_glimmerT_10837-T1 Valid prediction for GlimmerHMM_glimmerT_10843-T1 Valid prediction for GlimmerHMM_glimmerT_10849-T1 Couldn't classify 70931, 71095 Sorry, prediction pasa_asmbl_41801.p1 fails validation. (TCC) TG 70931-71095 GT AGG (GTG) AG 71286-71476 GT AGG (ACA) AG 72371-72562 GT AGG (CAT) AG 72911-73108 GT AGG (GAT) AG 73203-73367 GT AGG (GTG) AG 73467-73851 GT AGG (GTG) AG 74505-74729 AG AAA add_exon() Sorry, pasa_asmbl_41801.p1 71286-71476-terminal-2 is invalid. -recovered pasa_asmbl_41801.p1, terminal, 71286, 71476 add_exon() Sorry, pasa_asmbl_41801.p1 72911-73108-terminal-1 is invalid. -recovered pasa_asmbl_41801.p1, terminal, 72911, 73108 -recovered pasa_asmbl_41801.p1, terminal, 74505, 74729 -recovered pasa_asmbl_41801.p1, internal, 71286, 71476 -recovered pasa_asmbl_41801.p1, internal, 72371, 72562 -recovered pasa_asmbl_41801.p1, internal, 72911, 73108 -recovered pasa_asmbl_41801.p1, internal, 73203, 73367 -recovered pasa_asmbl_41801.p1, internal, 73467, 73851 Valid prediction for snap_scaffold_4-snap.2925-T1 Valid prediction for HiQ_model.g7155.t1 Valid prediction for GeneMark_model.17608_t Valid prediction for GeneMark_model.17568_t Valid prediction for snap_scaffold_4-snap.2936-T1 Valid prediction for GeneMark_model.17583_t Valid prediction for GeneMark_model.17589_t Valid prediction for snap_scaffold_4-snap.2939-T1 Valid prediction for pasa_asmbl_41808.p1 Valid prediction for CodingQuarry_transcript_49127-T1 Valid prediction for GeneMark_model.17592_t Valid prediction for snap_scaffold_4-snap.2919-T1 Valid prediction for GlimmerHMM_glimmerT_10821-T1 Valid prediction for GeneMark_model.17605_t Valid prediction for snap_scaffold_4-snap.2946-T1 Valid prediction for snap_scaffold_4-snap.2963-T1 Valid prediction for snap_scaffold_4-snap.2920-T1 Valid prediction for CodingQuarry_transcript_49130-T1 Valid prediction for CodingQuarry_transcript_49136-T1 Valid prediction for GlimmerHMM_glimmerT_10844-T1 Valid prediction for GeneMark_model.17567_t Valid prediction for snap_scaffold_4-snap.2941-T1 Couldn't classify 45199, 45603 Sorry, prediction pasa_asmbl_41805.p1 fails validation. (GAC) AA 45199-45603 GA TAG Valid prediction for GlimmerHMM_glimmerT_10846-T1 Couldn't classify 38345, 38410 Sorry, prediction pasa_asmbl_41807.p1 fails validation. (GTT) GA 38345-38410 GT AGG (CAC) AG 38581-38721 GT AGG (GTT) AG 38898-39023 GT AGG (CTG) AG 39139-39246 TA GAT -recovered pasa_asmbl_41807.p1, terminal, 39139, 39246 -recovered pasa_asmbl_41807.p1, internal, 38581, 38721 -recovered pasa_asmbl_41807.p1, internal, 38898, 39023 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 26038, rend_intergenic: 22038 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62356, rend_intergenic: 57957 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102731, rend_intergenic: 93599 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103556, rend_intergenic: 102856 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 109282, rend_intergenic: 103670 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153267, rend_intergenic: 150720 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167924, rend_intergenic: 167549 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 175801, rend_intergenic: 169231 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 269562, rend_intergenic: 264708 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 281595 -exon list size: 870 building trellis 0.1 0.2 0.3 0.5 0.6 0.7 0.8 0.9 1.0 1.1 1.3 1.4 1.5 1.6 1.7 1.8 1.9 2.1 2.2 2.3 2.4 2.5 2.6 2.8 2.9 3.0 3.1 3.2 3.3 3.4 3.6 3.7 3.8 3.9 4.0 4.1 4.2 4.4 4.5 4.6 4.7 4.8 4.9 5.0 5.2 5.3 5.4 5.5 5.6 5.7 5.8 6.0 6.1 6.2 6.3 6.4 6.5 6.7 6.8 6.9 7.0 7.1 7.2 7.3 7.5 7.6 7.7 7.8 7.9 8.0 8.1 8.3 8.4 8.5 8.6 8.7 8.8 8.9 9.1 9.2 9.3 9.4 9.5 9.6 9.7 9.9 10.0 10.1 10.2 10.3 10.4 10.6 10.7 10.8 10.9 11.0 11.1 11.2 11.4 11.5 11.6 11.7 11.8 11.9 12.0 12.2 12.3 12.4 12.5 12.6 12.7 12.8 13.0 13.1 13.2 13.3 13.4 13.5 13.6 13.8 13.9 14.0 14.1 14.2 14.3 14.4 14.6 14.7 14.8 14.9 15.0 15.1 15.3 15.4 15.5 15.6 15.7 15.8 15.9 16.1 16.2 16.3 16.4 16.5 16.6 16.7 16.9 17.0 17.1 17.2 17.3 17.4 17.5 17.7 17.8 17.9 18.0 18.1 18.2 18.3 18.5 18.6 18.7 18.8 18.9 19.0 19.2 19.3 19.4 19.5 19.6 19.7 19.8 20.0 20.1 20.2 20.3 20.4 20.5 20.6 20.8 20.9 21.0 21.1 21.2 21.3 21.4 21.6 21.7 21.8 21.9 22.0 22.1 22.2 22.4 22.5 22.6 22.7 22.8 22.9 23.1 23.2 23.3 23.4 23.5 23.6 23.7 23.9 24.0 24.1 24.2 24.3 24.4 24.5 24.7 24.8 24.9 25.0 25.1 25.2 25.3 25.5 25.6 25.7 25.8 25.9 26.0 26.1 26.3 26.4 26.5 26.6 26.7 26.8 26.9 27.1 27.2 27.3 27.4 27.5 27.6 27.8 27.9 28.0 28.1 28.2 28.3 28.4 28.6 28.7 28.8 28.9 29.0 29.1 29.2 29.4 29.5 29.6 29.7 29.8 29.9 30.0 30.2 30.3 30.4 30.5 30.6 30.7 30.8 31.0 31.1 31.2 31.3 31.4 31.5 31.7 31.8 31.9 32.0 32.1 32.2 32.3 32.5 32.6 32.7 32.8 32.9 33.0 33.1 33.3 33.4 33.5 33.6 33.7 33.8 33.9 34.1 34.2 34.3 34.4 34.5 34.6 34.7 34.9 35.0 35.1 35.2 35.3 35.4 35.6 35.7 35.8 35.9 36.0 36.1 36.2 36.4 36.5 36.6 36.7 36.8 36.9 37.0 37.2 37.3 37.4 37.5 37.6 37.7 37.8 38.0 38.1 38.2 38.3 38.4 38.5 38.6 38.8 38.9 39.0 39.1 39.2 39.3 39.4 39.6 39.7 39.8 39.9 40.0 40.1 40.3 40.4 40.5 40.6 40.7 40.8 40.9 41.1 41.2 41.3 41.4 41.5 41.6 41.7 41.9 42.0 42.1 42.2 42.3 42.4 42.5 42.7 42.8 42.9 43.0 43.1 43.2 43.3 43.5 43.6 43.7 43.8 43.9 44.0 44.2 44.3 44.4 44.5 44.6 44.7 44.8 45.0 45.1 45.2 45.3 45.4 45.5 45.6 45.8 45.9 46.0 46.1 46.2 46.3 46.4 46.6 46.7 46.8 46.9 47.0 47.1 47.2 47.4 47.5 47.6 47.7 47.8 47.9 48.1 48.2 48.3 48.4 48.5 48.6 48.7 48.9 49.0 49.1 49.2 49.3 49.4 49.5 49.7 49.8 49.9 50.0 50.1 50.2 50.3 50.5 50.6 50.7 50.8 50.9 51.0 51.1 51.3 51.4 51.5 51.6 51.7 51.8 51.9 52.1 52.2 52.3 52.4 52.5 52.6 52.8 52.9 53.0 53.1 53.2 53.3 53.4 53.6 53.7 53.8 53.9 54.0 54.1 54.2 54.4 54.5 54.6 54.7 54.8 54.9 55.0 55.2 55.3 55.4 55.5 55.6 55.7 55.8 56.0 56.1 56.2 56.3 56.4 56.5 56.7 56.8 56.9 57.0 57.1 57.2 57.3 57.5 57.6 57.7 57.8 57.9 58.0 58.1 58.3 58.4 58.5 58.6 58.7 58.8 58.9 59.1 59.2 59.3 59.4 59.5 59.6 59.7 59.9 60.0 60.1 60.2 60.3 60.4 60.6 60.7 60.8 60.9 61.0 61.1 61.2 61.4 61.5 61.6 61.7 61.8 61.9 62.0 62.2 62.3 62.4 62.5 62.6 62.7 62.8 63.0 63.1 63.2 63.3 63.4 63.5 63.6 63.8 63.9 64.0 64.1 64.2 64.3 64.4 64.6 64.7 64.8 64.9 65.0 65.1 65.3 65.4 65.5 65.6 65.7 65.8 65.9 66.1 66.2 66.3 66.4 66.5 66.6 66.7 66.9 67.0 67.1 67.2 67.3 67.4 67.5 67.7 67.8 67.9 68.0 68.1 68.2 68.3 68.5 68.6 68.7 68.8 68.9 69.0 69.2 69.3 69.4 69.5 69.6 69.7 69.8 70.0 70.1 70.2 70.3 70.4 70.5 70.6 70.8 70.9 71.0 71.1 71.2 71.3 71.4 71.6 71.7 71.8 71.9 72.0 72.1 72.2 72.4 72.5 72.6 72.7 72.8 72.9 73.1 73.2 73.3 73.4 73.5 73.6 73.7 73.9 74.0 74.1 74.2 74.3 74.4 74.5 74.7 74.8 74.9 75.0 75.1 75.2 75.3 75.5 75.6 75.7 75.8 75.9 76.0 76.1 76.3 76.4 76.5 76.6 76.7 76.8 76.9 77.1 77.2 77.3 77.4 77.5 77.6 77.8 77.9 78.0 78.1 78.2 78.3 78.4 78.6 78.7 78.8 78.9 79.0 79.1 79.2 79.4 79.5 79.6 79.7 79.8 79.9 80.0 80.2 80.3 80.4 80.5 80.6 80.7 80.8 81.0 81.1 81.2 81.3 81.4 81.5 81.7 81.8 81.9 82.0 82.1 82.2 82.3 82.5 82.6 82.7 82.8 82.9 83.0 83.1 83.3 83.4 83.5 83.6 83.7 83.8 83.9 84.1 84.2 84.3 84.4 84.5 84.6 84.7 84.9 85.0 85.1 85.2 85.3 85.4 85.6 85.7 85.8 85.9 86.0 86.1 86.2 86.4 86.5 86.6 86.7 86.8 86.9 87.0 87.2 87.3 87.4 87.5 87.6 87.7 87.8 88.0 88.1 88.2 88.3 88.4 88.5 88.6 88.8 88.9 89.0 89.1 89.2 89.3 89.4 89.6 89.7 89.8 89.9 90.0 90.1 90.3 90.4 90.5 90.6 90.7 90.8 90.9 91.1 91.2 91.3 91.4 91.5 91.6 91.7 91.9 92.0 92.1 92.2 92.3 92.4 92.5 92.7 92.8 92.9 93.0 93.1 93.2 93.3 93.5 93.6 93.7 93.8 93.9 94.0 94.2 94.3 94.4 94.5 94.6 94.7 94.8 95.0 95.1 95.2 95.3 95.4 95.5 95.6 95.8 95.9 96.0 96.1 96.2 96.3 96.4 96.6 96.7 96.8 96.9 97.0 97.1 97.2 97.4 97.5 97.6 97.7 97.8 97.9 98.1 98.2 98.3 98.4 98.5 98.6 98.7 98.9 99.0 99.1 99.2 99.3 99.4 99.5 99.7 99.8 99.9 -found 42 predictions from path traversal Error with prediction: snap lend_intergenic: 26038, rend_intergenic: 22038 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 62356, rend_intergenic: 57957 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 102731, rend_intergenic: 93599 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 103556, rend_intergenic: 102856 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 109282, rend_intergenic: 103670 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 153267, rend_intergenic: 150720 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 167924, rend_intergenic: 167549 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 175801, rend_intergenic: 169231 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 269562, rend_intergenic: 264708 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 37 predictions persist after filtering for low support