-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_4/scaffold_4_12496020-12741667

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_4-snap.2662-T1
Valid prediction for CodingQuarry_transcript_49055-T1
Valid prediction for snap_scaffold_4-snap.2679-T1
Valid prediction for GlimmerHMM_glimmerT_10652-T1
Valid prediction for GeneMark_model.17330_t
Valid prediction for GlimmerHMM_glimmerT_10640-T1
Valid prediction for GeneMark_model.17327_t
Valid prediction for Augustus_model.g6978.t1
Valid prediction for GlimmerHMM_glimmerT_10647-T1
Valid prediction for GeneMark_model.17344_t
Valid prediction for Augustus_model.g6972.t1
Valid prediction for snap_scaffold_4-snap.2676-T1
Couldn't classify 109225, 109341
Sorry, prediction pasa_asmbl_43063.p1 fails validation.
(ATG)	 AT	106585-106635	GT	GCG
(ACA)	 AG	107532-107624	GT	AGG
(TTG)	 AG	107732-107839	GT	AGG
(GTT)	 AG	108005-108163	GT	AGG
(AAC)	 AG	108371-108448	GT	CAG
(AAG)	 AG	108768-108891	GT	GGG
(TTT)	 AG	108967-109079	GT	AGG
(GCA)	 AG	109225-109341	CA	AAC
-recovered pasa_asmbl_43063.p1, initial, 106585, 106635
-recovered pasa_asmbl_43063.p1, internal, 107532, 107624
-recovered pasa_asmbl_43063.p1, internal, 107732, 107839
-recovered pasa_asmbl_43063.p1, internal, 108005, 108163
-recovered pasa_asmbl_43063.p1, internal, 108371, 108448
-recovered pasa_asmbl_43063.p1, internal, 108768, 108891
-recovered pasa_asmbl_43063.p1, internal, 108967, 109079
Valid prediction for pasa_asmbl_43070.p1
Valid prediction for GeneMark_model.17342_t
Valid prediction for HiQ_model.g6989.t1
Valid prediction for Augustus_model.g6984.t1
Valid prediction for GeneMark_model.17346_t
Valid prediction for GlimmerHMM_glimmerT_10639-T1
Valid prediction for GlimmerHMM_glimmerT_10656-T1
Valid prediction for snap_scaffold_4-snap.2694-T1
Valid prediction for HiQ_model.g6974.t1
Valid prediction for snap_scaffold_4-snap.2697-T1
Valid prediction for pasa_asmbl_43072.p1
Valid prediction for HiQ_model.g6987.t1
Couldn't classify 93930, 94088
Sorry, prediction pasa_asmbl_43062.p1 fails validation.
(TTT)	 AC	93930-94088	GT	TGG
(ATG)	 AG	94953-95114	GT	AGG
(AAA)	 AG	95332-95546	GT	ATG
(GCC)	 AG	95806-95992	AA	GAA
-recovered pasa_asmbl_43062.p1, initial, 94953, 95114
-recovered pasa_asmbl_43062.p1, terminal, 95806, 95992
-recovered pasa_asmbl_43062.p1, internal, 94953, 95114
-recovered pasa_asmbl_43062.p1, internal, 95332, 95546
Valid prediction for snap_scaffold_4-snap.2666-T1
Valid prediction for snap_scaffold_4-snap.2699-T1
Valid prediction for snap_scaffold_4-snap.2678-T1
Valid prediction for GlimmerHMM_glimmerT_10649-T1
Valid prediction for GeneMark_model.17328_t
Valid prediction for snap_scaffold_4-snap.2696-T1
Valid prediction for snap_scaffold_4-snap.2686-T1
Couldn't classify 228696, 228898
Sorry, prediction pasa_asmbl_43076.p1 fails validation.
(GAA)	 AG	228696-228898	GT	AAG
(TTG)	 AG	229056-229225	GT	AGG
(ACC)	 AG	230219-230422	GT	GAG
(GTA)	 AG	230543-230614	GT	GGG
(AGA)	 AG	231163-231231	GT	GGG
(TTA)	 AG	231417-231482	GT	AGG
(ACC)	 AG	231635-231682	GT	AGG
(AAG)	 AG	231960-232043	GT	GGG
(GCT)	 AG	232342-232865	GG	GAG
-recovered pasa_asmbl_43076.p1, terminal, 232342, 232865
-recovered pasa_asmbl_43076.p1, internal, 228696, 228898
-recovered pasa_asmbl_43076.p1, internal, 229056, 229225
-recovered pasa_asmbl_43076.p1, internal, 230219, 230422
-recovered pasa_asmbl_43076.p1, internal, 230543, 230614
-recovered pasa_asmbl_43076.p1, internal, 231163, 231231
-recovered pasa_asmbl_43076.p1, internal, 231417, 231482
-recovered pasa_asmbl_43076.p1, internal, 231635, 231682
-recovered pasa_asmbl_43076.p1, internal, 231960, 232043
Valid prediction for snap_scaffold_4-snap.2674-T1
Valid prediction for GlimmerHMM_glimmerT_10637-T1
Couldn't classify 201722, 202228
Sorry, prediction pasa_asmbl_43069.p1 fails validation.
(ATG)	 TA	201722-202228	TG	ATT
Valid prediction for snap_scaffold_4-snap.2669-T1
Valid prediction for GeneMark_model.17331_t
Valid prediction for GlimmerHMM_glimmerT_10633-T1
Valid prediction for snap_scaffold_4-snap.2675-T1
Valid prediction for GeneMark_model.17339_t
Valid prediction for GeneMark_model.17321_t
Valid prediction for snap_scaffold_4-snap.2690-T1
Valid prediction for GeneMark_model.17318_t
Valid prediction for GeneMark_model.17316_t
Couldn't classify 91751, 91882
Couldn't classify 93493, 93597
Sorry, prediction pasa_asmbl_43061.p1 fails validation.
(AAG)	 AG	91751-91882	GT	ATG
(GAA)	 AG	92591-92681	GT	GTG
(ATG)	 AG	92810-92910	GT	AGG
(GGC)	 AG	92998-93096	GT	CTG
(GAA)	 AG	93493-93597	AC	ACA
add_exon() Sorry, pasa_asmbl_43061.p1 92810-92910-initial-1 is invalid.
-recovered pasa_asmbl_43061.p1, initial, 92810, 92910
-recovered pasa_asmbl_43061.p1, internal, 91751, 91882
-recovered pasa_asmbl_43061.p1, internal, 92591, 92681
-recovered pasa_asmbl_43061.p1, internal, 92810, 92910
-recovered pasa_asmbl_43061.p1, internal, 92998, 93096
Valid prediction for GlimmerHMM_glimmerT_10654-T1
Valid prediction for Augustus_model.g6971.t1
Valid prediction for GlimmerHMM_glimmerT_10645-T1
Valid prediction for snap_scaffold_4-snap.2691-T1
Valid prediction for GeneMark_model.17324_t
Couldn't classify 109604, 109725
Sorry, prediction pasa_asmbl_43065.p1 fails validation.
(GAG)	 TG	109604-109725	GT	ATG
(CTG)	 AG	109879-109995	GT	CGG
(GTA)	 AG	110132-110216	GT	AGG
(ACT)	 AG	110350-110443	GT	AGG
(AAG)	 AG	110710-110755	GT	AGG
(GGT)	 AG	111053-111204	GT	TGG
(ACT)	 AG	111379-111469	GT	GGG
(GGT)	 AG	111652-111727	GT	ATG
(GCG)	 AG	112295-112402	AC	GAA
-recovered pasa_asmbl_43065.p1, terminal, 112295, 112402
-recovered pasa_asmbl_43065.p1, internal, 109879, 109995
-recovered pasa_asmbl_43065.p1, internal, 110132, 110216
-recovered pasa_asmbl_43065.p1, internal, 110350, 110443
-recovered pasa_asmbl_43065.p1, internal, 110710, 110755
-recovered pasa_asmbl_43065.p1, internal, 111053, 111204
-recovered pasa_asmbl_43065.p1, internal, 111379, 111469
-recovered pasa_asmbl_43065.p1, internal, 111652, 111727
Valid prediction for Augustus_model.g6981.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g6975.t1
Valid prediction for snap_scaffold_4-snap.2673-T1
Valid prediction for GlimmerHMM_glimmerT_10636-T1
Valid prediction for GeneMark_model.17319_t
Valid prediction for GeneMark_model.17323_t
Valid prediction for Augustus_model.g6992.t1
Valid prediction for snap_scaffold_4-snap.2683-T1
Valid prediction for pasa_asmbl_42315.p1
Valid prediction for Augustus_model.g6986.t1
Valid prediction for pasa_asmbl_41690.p1
Couldn't classify 164694, 164777
Couldn't classify 166684, 166818
Sorry, prediction pasa_asmbl_41677.p1 fails validation.
(CTC)	 AC	164694-164777	GT	AGG
(AGC)	 AG	165000-165112	GT	AGG
(TGT)	 AG	165419-165598	GT	GTG
(GCA)	 AG	165700-165790	GT	AGG
(CTT)	 AG	166212-166391	GT	CTG
(ATT)	 AG	166684-166818	AC	ACA
-recovered pasa_asmbl_41677.p1, internal, 165000, 165112
-recovered pasa_asmbl_41677.p1, internal, 165419, 165598
-recovered pasa_asmbl_41677.p1, internal, 165700, 165790
-recovered pasa_asmbl_41677.p1, internal, 166212, 166391
Valid prediction for GeneMark_model.17329_t
Valid prediction for CodingQuarry_transcript_49050-T1
Valid prediction for GlimmerHMM_glimmerT_10655-T1
Valid prediction for GlimmerHMM_glimmerT_10651-T1
Valid prediction for HiQ_model.g6969.t1
Valid prediction for pasa_asmbl_41667.p1
Valid prediction for Augustus_model.g6980.t1
Valid prediction for GlimmerHMM_glimmerT_10644-T1
Valid prediction for GeneMark_model.17337_t
Valid prediction for GlimmerHMM_glimmerT_10628-T1
Valid prediction for pasa_asmbl_41681.p1
Valid prediction for snap_scaffold_4-snap.2702-T1
Valid prediction for GeneMark_model.17317_t
Valid prediction for GlimmerHMM_glimmerT_10631-T1
Valid prediction for snap_scaffold_4-snap.2663-T1
Valid prediction for GlimmerHMM_glimmerT_10643-T1
Valid prediction for CodingQuarry_transcript_49043-T1
Valid prediction for GeneMark_model.17345_t
Valid prediction for HiQ_model.g6965.t1
Valid prediction for snap_scaffold_4-snap.2665-T1
Valid prediction for pasa_asmbl_41679.p1
Valid prediction for snap_scaffold_4-snap.2695-T1
Couldn't classify 1727, 1862
Couldn't classify 1993, 2573
Sorry, prediction pasa_asmbl_42364.p1 fails validation.
(GGG)	 GT	1727-1862	GT	GGG
(GTA)	 AG	1993-2573	TC	CGT
Valid prediction for GlimmerHMM_glimmerT_10648-T1
Valid prediction for snap_scaffold_4-snap.2670-T1
Valid prediction for snap_scaffold_4-snap.2693-T1
Valid prediction for snap_scaffold_4-snap.2677-T1
Couldn't classify 183294, 183311
Sorry, prediction pasa_asmbl_41670.p1 fails validation.
(GAG)	 CG	183294-183311	GT	TGG
(GCA)	 AG	184891-184960	GT	TGG
(GCA)	 AG	185250-185329	GT	AGG
(AAA)	 AG	185950-186042	GT	TGG
(ATC)	 AG	186142-186324	GT	AGG
(CTG)	 AG	186481-186557	GT	TCG
(GCC)	 AG	186817-186974	GT	AGG
(AGG)	 AG	187124-187353	TG	GAT
-recovered pasa_asmbl_41670.p1, terminal, 187124, 187353
-recovered pasa_asmbl_41670.p1, internal, 184891, 184960
-recovered pasa_asmbl_41670.p1, internal, 185250, 185329
-recovered pasa_asmbl_41670.p1, internal, 185950, 186042
-recovered pasa_asmbl_41670.p1, internal, 186142, 186324
-recovered pasa_asmbl_41670.p1, internal, 186481, 186557
-recovered pasa_asmbl_41670.p1, internal, 186817, 186974
Valid prediction for HiQ_model.g6966.t1
Valid prediction for snap_scaffold_4-snap.2688-T1
Valid prediction for snap_scaffold_4-snap.2692-T1
Valid prediction for GeneMark_model.17340_t
Valid prediction for HiQ_model.g6988.t1
Valid prediction for pasa_asmbl_41695.p1
Valid prediction for Augustus_model.g6964.t1
Valid prediction for GlimmerHMM_glimmerT_10646-T1
Valid prediction for GeneMark_model.17322_t
Valid prediction for pasa_asmbl_41663.p1
Couldn't classify 97281, 97468
Sorry, prediction pasa_asmbl_41688.p1 fails validation.
(ATG)	 CC	96041-96086	GT	AGG
(ACG)	 AG	96669-97037	GT	GGG
(AAC)	 AG	97281-97468	CT	CCC
-recovered pasa_asmbl_41688.p1, initial, 96041, 96086
-recovered pasa_asmbl_41688.p1, internal, 96669, 97037
Valid prediction for snap_scaffold_4-snap.2667-T1
Valid prediction for CodingQuarry_transcript_49047-T1
Valid prediction for GlimmerHMM_glimmerT_10634-T1
Valid prediction for pasa_asmbl_41671.p1
Valid prediction for GeneMark_model.17335_t
Valid prediction for Augustus_model.g6970.t1
Couldn't classify 167095, 167180
Sorry, prediction pasa_asmbl_41674.p1 fails validation.
(CAG)	 AA	167095-167180	GT	AGG
(GTT)	 AG	167296-167405	GT	GGG
(CAT)	 AG	167555-167717	GT	AGG
(TGG)	 AG	167907-168115	GT	TAG
(ATG)	 AG	168394-168517	GT	AAG
(GTG)	 AG	168877-168982	GT	AGG
(CTA)	 AG	169065-169254	GT	AGG
(AGT)	 AG	169453-169529	GT	AGG
(GGA)	 AG	169708-169803	GT	AGG
(GTG)	 AG	170096-170215	GT	CGG
(GGG)	 AG	170300-170412	GT	GGG
(CCA)	 AG	170652-170778	GT	AGG
(TTG)	 AG	171012-171070	GT	CGG
(ATC)	 AG	171298-171430	TC	GAT
add_exon() Sorry, pasa_asmbl_41674.p1 168394-168517-initial-1 is invalid.
-recovered pasa_asmbl_41674.p1, initial, 168394, 168517
-recovered pasa_asmbl_41674.p1, terminal, 171298, 171430
-recovered pasa_asmbl_41674.p1, internal, 167296, 167405
-recovered pasa_asmbl_41674.p1, internal, 167555, 167717
-recovered pasa_asmbl_41674.p1, internal, 167907, 168115
-recovered pasa_asmbl_41674.p1, internal, 168394, 168517
-recovered pasa_asmbl_41674.p1, internal, 168877, 168982
-recovered pasa_asmbl_41674.p1, internal, 169065, 169254
-recovered pasa_asmbl_41674.p1, internal, 169453, 169529
-recovered pasa_asmbl_41674.p1, internal, 169708, 169803
-recovered pasa_asmbl_41674.p1, internal, 170096, 170215
-recovered pasa_asmbl_41674.p1, internal, 170300, 170412
-recovered pasa_asmbl_41674.p1, internal, 170652, 170778
-recovered pasa_asmbl_41674.p1, internal, 171012, 171070
Valid prediction for CodingQuarry_transcript_49056-T1
Valid prediction for GlimmerHMM_glimmerT_10630-T1
Valid prediction for snap_scaffold_4-snap.2703-T1
Valid prediction for pasa_asmbl_41698.p1
Valid prediction for snap_scaffold_4-snap.2689-T1
Valid prediction for HiQ_model.g6982.t1
Couldn't classify 213371, 213712
Sorry, prediction pasa_asmbl_42355.p1 fails validation.
(TCT)	 CC	213371-213712	AG	GAA
Valid prediction for Augustus_model.g6977.t1
Valid prediction for snap_scaffold_4-snap.2684-T1
Valid prediction for HiQ_model.g6967.t1
Valid prediction for snap_scaffold_4-snap.2685-T1
Valid prediction for Augustus_model.g6973.t1
Valid prediction for CodingQuarry_transcript_49046-T1
Valid prediction for GlimmerHMM_glimmerT_10638-T1
Valid prediction for Augustus_model.g6962.t1
Valid prediction for Augustus_model.g6991.t1
Valid prediction for GlimmerHMM_glimmerT_10642-T1
Valid prediction for CodingQuarry_transcript_49044-T1
Valid prediction for Augustus_model.g6979.t1
Valid prediction for GeneMark_model.17341_t
Valid prediction for GlimmerHMM_glimmerT_10641-T1
Valid prediction for GlimmerHMM_glimmerT_10658-T1
Valid prediction for CodingQuarry_transcript_49045-T1
Valid prediction for GeneMark_model.17326_t
Valid prediction for GeneMark_model.17315_t
Couldn't classify 214967, 215198
Sorry, prediction pasa_asmbl_41658.p1 fails validation.
(GCT)	 AA	214967-215198	GT	TGG
(AAC)	 AG	215436-215556	GT	AGG
(GTT)	 AG	215855-215906	GT	CGG
(CCT)	 AG	216266-216349	GT	AAG
(CAG)	 AG	217292-217324	CC	GAC
-recovered pasa_asmbl_41658.p1, terminal, 217292, 217324
-recovered pasa_asmbl_41658.p1, internal, 215436, 215556
-recovered pasa_asmbl_41658.p1, internal, 215855, 215906
-recovered pasa_asmbl_41658.p1, internal, 216266, 216349
Valid prediction for HiQ_model.g6983.t1
Valid prediction for pasa_asmbl_41701.p1
Valid prediction for snap_scaffold_4-snap.2668-T1
Valid prediction for GlimmerHMM_glimmerT_10632-T1
Valid prediction for HiQ_model.g6968.t1
Valid prediction for snap_scaffold_4-snap.2672-T1
Valid prediction for GeneMark_model.17334_t
Valid prediction for snap_scaffold_4-snap.2680-T1
Valid prediction for CodingQuarry_transcript_49051-T1
Couldn't classify 98395, 98431
Sorry, prediction pasa_asmbl_41687.p1 fails validation.
(GGG)	 AC	98395-98431	GT	GTG
(ATG)	 AG	98593-98895	GT	GAG
(AGA)	 AG	99143-99242	GT	AAG
(GGA)	 AG	100599-100659	AC	GAA
add_exon() Sorry, pasa_asmbl_41687.p1 98593-98895-initial-1 is invalid.
-recovered pasa_asmbl_41687.p1, initial, 98593, 98895
-recovered pasa_asmbl_41687.p1, terminal, 100599, 100659
-recovered pasa_asmbl_41687.p1, internal, 98593, 98895
-recovered pasa_asmbl_41687.p1, internal, 99143, 99242
Valid prediction for snap_scaffold_4-snap.2698-T1
Valid prediction for snap_scaffold_4-snap.2681-T1
Valid prediction for HiQ_model.g6976.t1
Valid prediction for snap_scaffold_4-snap.2682-T1
Valid prediction for GlimmerHMM_glimmerT_10653-T1
Valid prediction for GlimmerHMM_glimmerT_10650-T1
Valid prediction for GeneMark_model.17320_t
Valid prediction for HiQ_model.g6985.t1
Valid prediction for GeneMark_model.17338_t
Valid prediction for GeneMark_model.17333_t
Valid prediction for CodingQuarry_transcript_49048-T1
Valid prediction for snap_scaffold_4-snap.2700-T1
Valid prediction for HiQ_model.g6990.t1
Valid prediction for GeneMark_model.17325_t
Valid prediction for snap_scaffold_4-snap.2671-T1
Valid prediction for snap_scaffold_4-snap.2664-T1
Valid prediction for GlimmerHMM_glimmerT_10657-T1
Valid prediction for snap_scaffold_4-snap.2701-T1
Valid prediction for GlimmerHMM_glimmerT_10629-T1
Couldn't classify 2640, 3005
Sorry, prediction pasa_asmbl_42272.p1 fails validation.
(GCT)	 CA	2640-3005	GT	AGG
(CAC)	 AG	3238-3390	GT	CAG
(TTG)	 AG	4257-4334	GT	ATG
(AAC)	 AG	4743-4892	GT	ATG
(GAA)	 AG	5142-5309	GT	AGG
(GCT)	 AG	5501-5692	GT	AGG
(GAG)	 AG	6010-6201	GT	AGG
(CAA)	 AG	6389-6460	AG	GAA
-recovered pasa_asmbl_42272.p1, terminal, 6389, 6460
-recovered pasa_asmbl_42272.p1, internal, 3238, 3390
-recovered pasa_asmbl_42272.p1, internal, 4257, 4334
-recovered pasa_asmbl_42272.p1, internal, 4743, 4892
-recovered pasa_asmbl_42272.p1, internal, 5142, 5309
-recovered pasa_asmbl_42272.p1, internal, 5501, 5692
-recovered pasa_asmbl_42272.p1, internal, 6010, 6201
Couldn't classify 162256, 162699
Sorry, prediction pasa_asmbl_41678.p1 fails validation.
(AAC)	 CA	162256-162699	CG	ATC
Valid prediction for CodingQuarry_transcript_49057-T1
Valid prediction for pasa_asmbl_41680.p1
Valid prediction for CodingQuarry_transcript_49042-T1
Valid prediction for GeneMark_model.17347_t
Valid prediction for snap_scaffold_4-snap.2687-T1
Valid prediction for GeneMark_model.17314_t
Couldn't classify 209301, 209634
Sorry, prediction pasa_asmbl_41661.p1 fails validation.
(CAA)	 AC	209301-209634	GT	AGG
(AAA)	 AG	209720-209983	GT	GGG
(AAC)	 AG	210221-210350	GT	AGG
(GAG)	 AG	210471-210522	GT	TGG
(CCT)	 AG	210696-210820	GT	AGG
(GCC)	 AG	211157-211210	GT	AGG
(ATG)	 AG	211596-211605	AG	GAA
-recovered pasa_asmbl_41661.p1, terminal, 211596, 211605
-recovered pasa_asmbl_41661.p1, internal, 209720, 209983
-recovered pasa_asmbl_41661.p1, internal, 210221, 210350
-recovered pasa_asmbl_41661.p1, internal, 210471, 210522
-recovered pasa_asmbl_41661.p1, internal, 210696, 210820
-recovered pasa_asmbl_41661.p1, internal, 211157, 211210
Valid prediction for Augustus_model.g6963.t1
Valid prediction for GeneMark_model.17332_t
Valid prediction for CodingQuarry_transcript_49054-T1
Valid prediction for CodingQuarry_transcript_49049-T1
Valid prediction for GeneMark_model.17343_t
Valid prediction for GlimmerHMM_glimmerT_10635-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 11571, rend_intergenic: 7222  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55783, rend_intergenic: 46310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 245648
-exon list size: 669


building trellis

0.1    
0.3    
0.4    
0.6    
0.7    
0.9    
1.0    
1.2    
1.3    
1.5    
1.6    
1.8    
1.9    
2.1    
2.2    
2.4    
2.5    
2.7    
2.8    
3.0    
3.1    
3.3    
3.4    
3.6    
3.7    
3.9    
4.0    
4.2    
4.3    
4.5    
4.6    
4.8    
4.9    
5.1    
5.2    
5.4    
5.5    
5.7    
5.8    
6.0    
6.1    
6.3    
6.4    
6.6    
6.7    
6.9    
7.0    
7.2    
7.3    
7.5    
7.6    
7.7    
7.9    
8.0    
8.2    
8.3    
8.5    
8.6    
8.8    
8.9    
9.1    
9.2    
9.4    
9.5    
9.7    
9.8    
10.0    
10.1    
10.3    
10.4    
10.6    
10.7    
10.9    
11.0    
11.2    
11.3    
11.5    
11.6    
11.8    
11.9    
12.1    
12.2    
12.4    
12.5    
12.7    
12.8    
13.0    
13.1    
13.3    
13.4    
13.6    
13.7    
13.9    
14.0    
14.2    
14.3    
14.5    
14.6    
14.8    
14.9    
15.1    
15.2    
15.4    
15.5    
15.6    
15.8    
15.9    
16.1    
16.2    
16.4    
16.5    
16.7    
16.8    
17.0    
17.1    
17.3    
17.4    
17.6    
17.7    
17.9    
18.0    
18.2    
18.3    
18.5    
18.6    
18.8    
18.9    
19.1    
19.2    
19.4    
19.5    
19.7    
19.8    
20.0    
20.1    
20.3    
20.4    
20.6    
20.7    
20.9    
21.0    
21.2    
21.3    
21.5    
21.6    
21.8    
21.9    
22.1    
22.2    
22.4    
22.5    
22.7    
22.8    
23.0    
23.1    
23.2    
23.4    
23.5    
23.7    
23.8    
24.0    
24.1    
24.3    
24.4    
24.6    
24.7    
24.9    
25.0    
25.2    
25.3    
25.5    
25.6    
25.8    
25.9    
26.1    
26.2    
26.4    
26.5    
26.7    
26.8    
27.0    
27.1    
27.3    
27.4    
27.6    
27.7    
27.9    
28.0    
28.2    
28.3    
28.5    
28.6    
28.8    
28.9    
29.1    
29.2    
29.4    
29.5    
29.7    
29.8    
30.0    
30.1    
30.3    
30.4    
30.6    
30.7    
30.8    
31.0    
31.1    
31.3    
31.4    
31.6    
31.7    
31.9    
32.0    
32.2    
32.3    
32.5    
32.6    
32.8    
32.9    
33.1    
33.2    
33.4    
33.5    
33.7    
33.8    
34.0    
34.1    
34.3    
34.4    
34.6    
34.7    
34.9    
35.0    
35.2    
35.3    
35.5    
35.6    
35.8    
35.9    
36.1    
36.2    
36.4    
36.5    
36.7    
36.8    
37.0    
37.1    
37.3    
37.4    
37.6    
37.7    
37.9    
38.0    
38.2    
38.3    
38.5    
38.6    
38.7    
38.9    
39.0    
39.2    
39.3    
39.5    
39.6    
39.8    
39.9    
40.1    
40.2    
40.4    
40.5    
40.7    
40.8    
41.0    
41.1    
41.3    
41.4    
41.6    
41.7    
41.9    
42.0    
42.2    
42.3    
42.5    
42.6    
42.8    
42.9    
43.1    
43.2    
43.4    
43.5    
43.7    
43.8    
44.0    
44.1    
44.3    
44.4    
44.6    
44.7    
44.9    
45.0    
45.2    
45.3    
45.5    
45.6    
45.8    
45.9    
46.1    
46.2    
46.3    
46.5    
46.6    
46.8    
46.9    
47.1    
47.2    
47.4    
47.5    
47.7    
47.8    
48.0    
48.1    
48.3    
48.4    
48.6    
48.7    
48.9    
49.0    
49.2    
49.3    
49.5    
49.6    
49.8    
49.9    
50.1    
50.2    
50.4    
50.5    
50.7    
50.8    
51.0    
51.1    
51.3    
51.4    
51.6    
51.7    
51.9    
52.0    
52.2    
52.3    
52.5    
52.6    
52.8    
52.9    
53.1    
53.2    
53.4    
53.5    
53.7    
53.8    
53.9    
54.1    
54.2    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.4    
55.6    
55.7    
55.9    
56.0    
56.2    
56.3    
56.5    
56.6    
56.8    
56.9    
57.1    
57.2    
57.4    
57.5    
57.7    
57.8    
58.0    
58.1    
58.3    
58.4    
58.6    
58.7    
58.9    
59.0    
59.2    
59.3    
59.5    
59.6    
59.8    
59.9    
60.1    
60.2    
60.4    
60.5    
60.7    
60.8    
61.0    
61.1    
61.3    
61.4    
61.5    
61.7    
61.8    
62.0    
62.1    
62.3    
62.4    
62.6    
62.7    
62.9    
63.0    
63.2    
63.3    
63.5    
63.6    
63.8    
63.9    
64.1    
64.2    
64.4    
64.5    
64.7    
64.8    
65.0    
65.1    
65.3    
65.4    
65.6    
65.7    
65.9    
66.0    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.1    
67.2    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.9    
69.0    
69.2    
69.3    
69.4    
69.6    
69.7    
69.9    
70.0    
70.2    
70.3    
70.5    
70.6    
70.8    
70.9    
71.1    
71.2    
71.4    
71.5    
71.7    
71.8    
72.0    
72.1    
72.3    
72.4    
72.6    
72.7    
72.9    
73.0    
73.2    
73.3    
73.5    
73.6    
73.8    
73.9    
74.1    
74.2    
74.4    
74.5    
74.7    
74.8    
75.0    
75.1    
75.3    
75.4    
75.6    
75.7    
75.9    
76.0    
76.2    
76.3    
76.5    
76.6    
76.8    
76.9    
77.0    
77.2    
77.3    
77.5    
77.6    
77.8    
77.9    
78.1    
78.2    
78.4    
78.5    
78.7    
78.8    
79.0    
79.1    
79.3    
79.4    
79.6    
79.7    
79.9    
80.0    
80.2    
80.3    
80.5    
80.6    
80.8    
80.9    
81.1    
81.2    
81.4    
81.5    
81.7    
81.8    
82.0    
82.1    
82.3    
82.4    
82.6    
82.7    
82.9    
83.0    
83.2    
83.3    
83.5    
83.6    
83.8    
83.9    
84.1    
84.2    
84.4    
84.5    
84.6    
84.8    
84.9    
85.1    
85.2    
85.4    
85.5    
85.7    
85.8    
86.0    
86.1    
86.3    
86.4    
86.6    
86.7    
86.9    
87.0    
87.2    
87.3    
87.5    
87.6    
87.8    
87.9    
88.1    
88.2    
88.4    
88.5    
88.7    
88.8    
89.0    
89.1    
89.3    
89.4    
89.6    
89.7    
89.9    
90.0    
90.2    
90.3    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.7    
91.8    
92.0    
92.1    
92.3    
92.4    
92.5    
92.7    
92.8    
93.0    
93.1    
93.3    
93.4    
93.6    
93.7    
93.9    
94.0    
94.2    
94.3    
94.5    
94.6    
94.8    
94.9    
95.1    
95.2    
95.4    
95.5    
95.7    
95.8    
96.0    
96.1    
96.3    
96.4    
96.6    
96.7    
96.9    
97.0    
97.2    
97.3    
97.5    
97.6    
97.8    
97.9    
98.1    
98.2    
98.4    
98.5    
98.7    
98.8    
99.0    
99.1    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 33 predictions from path traversal
Error with prediction: snap lend_intergenic: 11571, rend_intergenic: 7222  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55783, rend_intergenic: 46310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 33 predictions persist after filtering for low support