-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_4/scaffold_4_10704203-10875246

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.16896_t
Valid prediction for snap_scaffold_4-snap.2313-T1
Valid prediction for GlimmerHMM_glimmerT_10365-T1
Valid prediction for GeneMark_model.16900_t
Valid prediction for GeneMark_model.16891_t
Valid prediction for GlimmerHMM_glimmerT_10343-T1
Valid prediction for GlimmerHMM_glimmerT_10360-T1
Valid prediction for GeneMark_model.16904_t
Valid prediction for snap_scaffold_4-snap.2311-T1
Couldn't classify 73502, 73540
Sorry, prediction GeneMark_model.16894_t fails validation.
(GGA)	 AG	73502-73540	GT	TGG
(CAT)	 AG	73730-73774	GT	CCG
(AGA)	 AG	74891-74969	GC	GAG
(AGA)	 AG	75102-75116	GT	AAG
(ACA)	 AG	75526-75578	GT	AGG
(AGA)	 AG	76464-76568	GT	TGG
(GAG)	 AG	78037-78042	GT	GGG
(GAG)	 AG	78082-78197	GT	GGG
(CTG)	 AG	79357-79478	CC	AAC
-recovered GeneMark_model.16894_t, terminal, 79357, 79478
-recovered GeneMark_model.16894_t, internal, 73502, 73540
-recovered GeneMark_model.16894_t, internal, 73730, 73774
-recovered GeneMark_model.16894_t, internal, 74891, 74969
-recovered GeneMark_model.16894_t, internal, 75102, 75116
-recovered GeneMark_model.16894_t, internal, 75526, 75578
-recovered GeneMark_model.16894_t, internal, 76464, 76568
-recovered GeneMark_model.16894_t, internal, 78037, 78042
-recovered GeneMark_model.16894_t, internal, 78082, 78197
Valid prediction for GeneMark_model.16893_t
Valid prediction for pasa_asmbl_43009.p1
Valid prediction for snap_scaffold_4-snap.2319-T1
Valid prediction for GlimmerHMM_glimmerT_10371-T1
Valid prediction for snap_scaffold_4-snap.2330-T1
Valid prediction for GlimmerHMM_glimmerT_10358-T1
Valid prediction for GeneMark_model.16880_t
Couldn't classify 157892, 158135
Sorry, prediction pasa_asmbl_43012.p1 fails validation.
(GTC)	 AC	157892-158135	GT	AAG
(ACA)	 AG	158487-159460	GA	AGG
-recovered pasa_asmbl_43012.p1, terminal, 158487, 159460
Valid prediction for GeneMark_model.16892_t
Valid prediction for Augustus_model.g6795.t1
Valid prediction for snap_scaffold_4-snap.2293-T1
Valid prediction for GeneMark_model.16882_t
Couldn't classify 143562, 143711
Sorry, prediction pasa_asmbl_43004.p1 fails validation.
(GAC)	 AG	143562-143711	GT	AGG
(GGT)	 AG	143927-144111	GT	CTG
(GAA)	 AG	145186-145868	GT	AGG
(TGT)	 AG	147441-147600	GT	AGG
(GTC)	 AG	149094-149421	TA	AAT
-recovered pasa_asmbl_43004.p1, terminal, 149094, 149421
-recovered pasa_asmbl_43004.p1, internal, 143562, 143711
-recovered pasa_asmbl_43004.p1, internal, 143927, 144111
-recovered pasa_asmbl_43004.p1, internal, 145186, 145868
-recovered pasa_asmbl_43004.p1, internal, 147441, 147600
Valid prediction for CodingQuarry_transcript_49015-T1
Valid prediction for Augustus_model.g6791.t1
Valid prediction for Augustus_model.g6793.t1
Valid prediction for snap_scaffold_4-snap.2323-T1
Valid prediction for GeneMark_model.16878_t
Valid prediction for GeneMark_model.16887_t
Valid prediction for snap_scaffold_4-snap.2322-T1
Valid prediction for GlimmerHMM_glimmerT_10341-T1
Valid prediction for GeneMark_model.16872_t
Valid prediction for GlimmerHMM_glimmerT_10367-T1
Valid prediction for snap_scaffold_4-snap.2307-T1
Valid prediction for GeneMark_model.16876_t
Valid prediction for snap_scaffold_4-snap.2309-T1
Valid prediction for snap_scaffold_4-snap.2298-T1
Valid prediction for GeneMark_model.16902_t
Valid prediction for HiQ_model.g6794.t1
Valid prediction for Augustus_model.g6789.t1
Valid prediction for GeneMark_model.16898_t
Valid prediction for GlimmerHMM_glimmerT_10356-T1
Valid prediction for Augustus_model.g6786.t1
Valid prediction for snap_scaffold_4-snap.2295-T1
Valid prediction for GlimmerHMM_glimmerT_10366-T1
Valid prediction for GeneMark_model.16886_t
Valid prediction for GlimmerHMM_glimmerT_10346-T1
Valid prediction for GeneMark_model.16907_t
Valid prediction for snap_scaffold_4-snap.2329-T1
Valid prediction for Augustus_model.g6781.t1
Valid prediction for snap_scaffold_4-snap.2303-T1
Valid prediction for snap_scaffold_4-snap.2314-T1
Valid prediction for snap_scaffold_4-snap.2301-T1
Valid prediction for GlimmerHMM_glimmerT_10353-T1
Valid prediction for snap_scaffold_4-snap.2316-T1
Valid prediction for Augustus_model.g6784.t1
Valid prediction for snap_scaffold_4-snap.2306-T1
Valid prediction for GlimmerHMM_glimmerT_10362-T1
Valid prediction for GeneMark_model.16889_t
Valid prediction for GeneMark_model.16873_t
Valid prediction for CodingQuarry_transcript_49014-T1
Valid prediction for Augustus_model.g6776.t1
Valid prediction for Augustus_model.g6785.t1
Valid prediction for GeneMark_model.16874_t
Valid prediction for snap_scaffold_4-snap.2294-T1
Valid prediction for snap_scaffold_4-snap.2325-T1
Valid prediction for GeneMark_model.16908_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g6778.t1
Valid prediction for Augustus_model.g6782.t1
Valid prediction for GeneMark_model.16879_t
Valid prediction for Augustus_model.g6788.t1
Valid prediction for GeneMark_model.16906_t
Valid prediction for snap_scaffold_4-snap.2315-T1
Valid prediction for GlimmerHMM_glimmerT_10357-T1
Valid prediction for GlimmerHMM_glimmerT_10359-T1
Valid prediction for GeneMark_model.16890_t
Valid prediction for GlimmerHMM_glimmerT_10350-T1
Valid prediction for GeneMark_model.16881_t
Valid prediction for GeneMark_model.16901_t
Valid prediction for GeneMark_model.16911_t
Valid prediction for GlimmerHMM_glimmerT_10368-T1
Valid prediction for GeneMark_model.16910_t
Valid prediction for GeneMark_model.16897_t
Valid prediction for GlimmerHMM_glimmerT_10344-T1
Valid prediction for GeneMark_model.16884_t
Valid prediction for snap_scaffold_4-snap.2327-T1
Valid prediction for GlimmerHMM_glimmerT_10354-T1
Valid prediction for snap_scaffold_4-snap.2302-T1
Valid prediction for snap_scaffold_4-snap.2305-T1
Valid prediction for GlimmerHMM_glimmerT_10369-T1
Valid prediction for Augustus_model.g6780.t1
Valid prediction for Augustus_model.g6796.t1
Valid prediction for GlimmerHMM_glimmerT_10345-T1
Valid prediction for snap_scaffold_4-snap.2331-T1
Valid prediction for Augustus_model.g6783.t1
Valid prediction for Augustus_model.g6779.t1
Valid prediction for GeneMark_model.16909_t
Valid prediction for snap_scaffold_4-snap.2310-T1
Valid prediction for snap_scaffold_4-snap.2320-T1
Valid prediction for GlimmerHMM_glimmerT_10340-T1
Valid prediction for snap_scaffold_4-snap.2297-T1
Valid prediction for GlimmerHMM_glimmerT_10348-T1
Valid prediction for GeneMark_model.16905_t
Valid prediction for snap_scaffold_4-snap.2299-T1
Valid prediction for Augustus_model.g6787.t1
Valid prediction for snap_scaffold_4-snap.2328-T1
Valid prediction for snap_scaffold_4-snap.2321-T1
Valid prediction for HiQ_model.g6797.t1
Valid prediction for snap_scaffold_4-snap.2326-T1
Valid prediction for GeneMark_model.16883_t
Valid prediction for snap_scaffold_4-snap.2292-T1
Valid prediction for GlimmerHMM_glimmerT_10364-T1
Valid prediction for GlimmerHMM_glimmerT_10355-T1
Valid prediction for GeneMark_model.16888_t
Valid prediction for GeneMark_model.16877_t
Valid prediction for snap_scaffold_4-snap.2304-T1
Valid prediction for GlimmerHMM_glimmerT_10370-T1
Couldn't classify 120309, 120371
Sorry, prediction pasa_asmbl_41603.p1 fails validation.
(CTG)	 TC	120309-120371	GT	AGG
(AAA)	 AG	122340-122422	GT	AGG
(GGA)	 AG	122658-122754	GT	AGG
(ATG)	 AG	122832-122999	TT	GAT
-recovered pasa_asmbl_41603.p1, terminal, 122832, 122999
-recovered pasa_asmbl_41603.p1, internal, 122340, 122422
-recovered pasa_asmbl_41603.p1, internal, 122658, 122754
Valid prediction for snap_scaffold_4-snap.2324-T1
Valid prediction for GlimmerHMM_glimmerT_10349-T1
Valid prediction for snap_scaffold_4-snap.2300-T1
Valid prediction for GeneMark_model.16871_t
Valid prediction for GlimmerHMM_glimmerT_10363-T1
Valid prediction for snap_scaffold_4-snap.2312-T1
Valid prediction for GlimmerHMM_glimmerT_10352-T1
Valid prediction for snap_scaffold_4-snap.2332-T1
Valid prediction for GeneMark_model.16895_t
Valid prediction for CodingQuarry_transcript_49016-T1
Valid prediction for GeneMark_model.16875_t
Valid prediction for GlimmerHMM_glimmerT_10347-T1
Valid prediction for snap_scaffold_4-snap.2318-T1
Valid prediction for snap_scaffold_4-snap.2308-T1
Valid prediction for pasa_asmbl_41604.p1
Valid prediction for GeneMark_model.16885_t
Valid prediction for Augustus_model.g6792.t1
Valid prediction for GlimmerHMM_glimmerT_10342-T1
Valid prediction for snap_scaffold_4-snap.2317-T1
Valid prediction for snap_scaffold_4-snap.2296-T1
Valid prediction for Augustus_model.g6790.t1
Valid prediction for GlimmerHMM_glimmerT_10351-T1
Valid prediction for snap_scaffold_4-snap.2291-T1
Valid prediction for GeneMark_model.16899_t
Valid prediction for snap_scaffold_4-snap.2333-T1
Valid prediction for GeneMark_model.16903_t
Valid prediction for Augustus_model.g6777.t1
Valid prediction for GlimmerHMM_glimmerT_10361-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 14044, rend_intergenic: 10550  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46211, rend_intergenic: 41993  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52575, rend_intergenic: 50321  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61359, rend_intergenic: 54526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85768, rend_intergenic: 82809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88911, rend_intergenic: 86064  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92024, rend_intergenic: 89468  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95594, rend_intergenic: 92220  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97079, rend_intergenic: 96752  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102150, rend_intergenic: 100203  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103227, rend_intergenic: 102651  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111169, rend_intergenic: 103379  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115185, rend_intergenic: 114081  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131013, rend_intergenic: 126778  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133041, rend_intergenic: 131185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138282, rend_intergenic: 134858  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149790, rend_intergenic: 140950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 171044
-exon list size: 660


building trellis

0.2    
0.3    
0.5    
0.6    
0.8    
0.9    
1.1    
1.2    
1.4    
1.5    
1.7    
1.8    
2.0    
2.1    
2.3    
2.4    
2.6    
2.7    
2.9    
3.0    
3.2    
3.3    
3.5    
3.6    
3.8    
3.9    
4.1    
4.2    
4.4    
4.5    
4.7    
4.8    
5.0    
5.1    
5.3    
5.4    
5.6    
5.7    
5.9    
6.0    
6.2    
6.3    
6.5    
6.6    
6.8    
6.9    
7.1    
7.3    
7.4    
7.6    
7.7    
7.9    
8.0    
8.2    
8.3    
8.5    
8.6    
8.8    
8.9    
9.1    
9.2    
9.4    
9.5    
9.7    
9.8    
10.0    
10.1    
10.3    
10.4    
10.6    
10.7    
10.9    
11.0    
11.2    
11.3    
11.5    
11.6    
11.8    
11.9    
12.1    
12.2    
12.4    
12.5    
12.7    
12.8    
13.0    
13.1    
13.3    
13.4    
13.6    
13.7    
13.9    
14.0    
14.2    
14.4    
14.5    
14.7    
14.8    
15.0    
15.1    
15.3    
15.4    
15.6    
15.7    
15.9    
16.0    
16.2    
16.3    
16.5    
16.6    
16.8    
16.9    
17.1    
17.2    
17.4    
17.5    
17.7    
17.8    
18.0    
18.1    
18.3    
18.4    
18.6    
18.7    
18.9    
19.0    
19.2    
19.3    
19.5    
19.6    
19.8    
19.9    
20.1    
20.2    
20.4    
20.5    
20.7    
20.8    
21.0    
21.1    
21.3    
21.5    
21.6    
21.8    
21.9    
22.1    
22.2    
22.4    
22.5    
22.7    
22.8    
23.0    
23.1    
23.3    
23.4    
23.6    
23.7    
23.9    
24.0    
24.2    
24.3    
24.5    
24.6    
24.8    
24.9    
25.1    
25.2    
25.4    
25.5    
25.7    
25.8    
26.0    
26.1    
26.3    
26.4    
26.6    
26.7    
26.9    
27.0    
27.2    
27.3    
27.5    
27.6    
27.8    
27.9    
28.1    
28.2    
28.4    
28.5    
28.7    
28.9    
29.0    
29.2    
29.3    
29.5    
29.6    
29.8    
29.9    
30.1    
30.2    
30.4    
30.5    
30.7    
30.8    
31.0    
31.1    
31.3    
31.4    
31.6    
31.7    
31.9    
32.0    
32.2    
32.3    
32.5    
32.6    
32.8    
32.9    
33.1    
33.2    
33.4    
33.5    
33.7    
33.8    
34.0    
34.1    
34.3    
34.4    
34.6    
34.7    
34.9    
35.0    
35.2    
35.3    
35.5    
35.6    
35.8    
36.0    
36.1    
36.3    
36.4    
36.6    
36.7    
36.9    
37.0    
37.2    
37.3    
37.5    
37.6    
37.8    
37.9    
38.1    
38.2    
38.4    
38.5    
38.7    
38.8    
39.0    
39.1    
39.3    
39.4    
39.6    
39.7    
39.9    
40.0    
40.2    
40.3    
40.5    
40.6    
40.8    
40.9    
41.1    
41.2    
41.4    
41.5    
41.7    
41.8    
42.0    
42.1    
42.3    
42.4    
42.6    
42.7    
42.9    
43.1    
43.2    
43.4    
43.5    
43.7    
43.8    
44.0    
44.1    
44.3    
44.4    
44.6    
44.7    
44.9    
45.0    
45.2    
45.3    
45.5    
45.6    
45.8    
45.9    
46.1    
46.2    
46.4    
46.5    
46.7    
46.8    
47.0    
47.1    
47.3    
47.4    
47.6    
47.7    
47.9    
48.0    
48.2    
48.3    
48.5    
48.6    
48.8    
48.9    
49.1    
49.2    
49.4    
49.5    
49.7    
49.8    
50.0    
50.2    
50.3    
50.5    
50.6    
50.8    
50.9    
51.1    
51.2    
51.4    
51.5    
51.7    
51.8    
52.0    
52.1    
52.3    
52.4    
52.6    
52.7    
52.9    
53.0    
53.2    
53.3    
53.5    
53.6    
53.8    
53.9    
54.1    
54.2    
54.4    
54.5    
54.7    
54.8    
55.0    
55.1    
55.3    
55.4    
55.6    
55.7    
55.9    
56.0    
56.2    
56.3    
56.5    
56.6    
56.8    
56.9    
57.1    
57.3    
57.4    
57.6    
57.7    
57.9    
58.0    
58.2    
58.3    
58.5    
58.6    
58.8    
58.9    
59.1    
59.2    
59.4    
59.5    
59.7    
59.8    
60.0    
60.1    
60.3    
60.4    
60.6    
60.7    
60.9    
61.0    
61.2    
61.3    
61.5    
61.6    
61.8    
61.9    
62.1    
62.2    
62.4    
62.5    
62.7    
62.8    
63.0    
63.1    
63.3    
63.4    
63.6    
63.7    
63.9    
64.0    
64.2    
64.4    
64.5    
64.7    
64.8    
65.0    
65.1    
65.3    
65.4    
65.6    
65.7    
65.9    
66.0    
66.2    
66.3    
66.5    
66.6    
66.8    
66.9    
67.1    
67.2    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.3    
68.4    
68.6    
68.7    
68.9    
69.0    
69.2    
69.3    
69.5    
69.6    
69.8    
69.9    
70.1    
70.2    
70.4    
70.5    
70.7    
70.8    
71.0    
71.1    
71.3    
71.5    
71.6    
71.8    
71.9    
72.1    
72.2    
72.4    
72.5    
72.7    
72.8    
73.0    
73.1    
73.3    
73.4    
73.6    
73.7    
73.9    
74.0    
74.2    
74.3    
74.5    
74.6    
74.8    
74.9    
75.1    
75.2    
75.4    
75.5    
75.7    
75.8    
76.0    
76.1    
76.3    
76.4    
76.6    
76.7    
76.9    
77.0    
77.2    
77.3    
77.5    
77.6    
77.8    
77.9    
78.1    
78.2    
78.4    
78.5    
78.7    
78.9    
79.0    
79.2    
79.3    
79.5    
79.6    
79.8    
79.9    
80.1    
80.2    
80.4    
80.5    
80.7    
80.8    
81.0    
81.1    
81.3    
81.4    
81.6    
81.7    
81.9    
82.0    
82.2    
82.3    
82.5    
82.6    
82.8    
82.9    
83.1    
83.2    
83.4    
83.5    
83.7    
83.8    
84.0    
84.1    
84.3    
84.4    
84.6    
84.7    
84.9    
85.0    
85.2    
85.3    
85.5    
85.6    
85.8    
86.0    
86.1    
86.3    
86.4    
86.6    
86.7    
86.9    
87.0    
87.2    
87.3    
87.5    
87.6    
87.8    
87.9    
88.1    
88.2    
88.4    
88.5    
88.7    
88.8    
89.0    
89.1    
89.3    
89.4    
89.6    
89.7    
89.9    
90.0    
90.2    
90.3    
90.5    
90.6    
90.8    
90.9    
91.1    
91.2    
91.4    
91.5    
91.7    
91.8    
92.0    
92.1    
92.3    
92.4    
92.6    
92.7    
92.9    
93.1    
93.2    
93.4    
93.5    
93.7    
93.8    
94.0    
94.1    
94.3    
94.4    
94.6    
94.7    
94.9    
95.0    
95.2    
95.3    
95.5    
95.6    
95.8    
95.9    
96.1    
96.2    
96.4    
96.5    
96.7    
96.8    
97.0    
97.1    
97.3    
97.4    
97.6    
97.7    
97.9    
98.0    
98.2    
98.3    
98.5    
98.6    
98.8    
98.9    
99.1    
99.2    
99.4    
99.5    
99.7    
99.8    
-found 33 predictions from path traversal
Error with prediction: snap lend_intergenic: 14044, rend_intergenic: 10550  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 46211, rend_intergenic: 41993  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 52575, rend_intergenic: 50321  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 61359, rend_intergenic: 54526  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85768, rend_intergenic: 82809  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 88911, rend_intergenic: 86064  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 92024, rend_intergenic: 89468  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95594, rend_intergenic: 92220  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97079, rend_intergenic: 96752  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102150, rend_intergenic: 100203  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 103227, rend_intergenic: 102651  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 111169, rend_intergenic: 103379  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115185, rend_intergenic: 114081  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 131013, rend_intergenic: 126778  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133041, rend_intergenic: 131185  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138282, rend_intergenic: 134858  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 149790, rend_intergenic: 140950  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 17 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 14442
-exon list size: 26


building trellis

3.6    
7.1    
10.7    
14.3    
17.9    
21.4    
25.0    
28.6    
32.1    
35.7    
39.3    
42.9    
46.4    
50.0    
53.6    
57.1    
60.7    
64.3    
67.9    
71.4    
75.0    
78.6    
82.1    
85.7    
89.3    
92.9    
96.4    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 13362
-exon list size: 20


building trellis

4.5    
9.1    
13.6    
18.2    
22.7    
27.3    
31.8    
36.4    
40.9    
45.5    
50.0    
54.5    
59.1    
63.6    
68.2    
72.7    
77.3    
81.8    
86.4    
90.9    
95.5    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 12972
-exon list size: 19


building trellis

4.8    
9.5    
14.3    
19.0    
23.8    
28.6    
33.3    
38.1    
42.9    
47.6    
52.4    
57.1    
61.9    
66.7    
71.4    
76.2    
81.0    
85.7    
90.5    
95.2    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support

-building DP trellis

-building trellis in range 1 - 12761
-exon list size: 17


building trellis

5.3    
10.5    
15.8    
21.1    
26.3    
31.6    
36.8    
42.1    
47.4    
52.6    
57.9    
63.2    
68.4    
73.7    
78.9    
84.2    
89.5    
94.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support