-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3570

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 812, 1000
Sorry, prediction GlimmerHMM_glimmerT_63391-T1 fails validation.
(ATG)	 AG	812-1000		CA
Couldn't classify 244, 422
Sorry, prediction snap_scaffold_3570-snap.1-T1 fails validation.
(ATC)	 AG	244-422	GT	GAG
(GAC)	 AG	758-870	GG	AGG
-recovered snap_scaffold_3570-snap.1-T1, terminal, 758, 870
-recovered snap_scaffold_3570-snap.1-T1, internal, 244, 422

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 100, 204
Couldn't classify 877, 972
Sorry, prediction GeneMark_model.111113_t fails validation.
(GCC)	 AG	100-204	GT	TGG
(CCT)	 AG	712-852	GT	ACG
(TCC)	 AG	877-972	GT	ACG
-recovered GeneMark_model.111113_t, internal, 100, 204
-recovered GeneMark_model.111113_t, internal, 712, 852
-recovered GeneMark_model.111113_t, internal, 877, 972

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1000
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support