-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3515

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 105, 281
Sorry, prediction Augustus_model.g42369.t1 fails validation.
(GAG)	 AG	105-281	GT	AGG
(TCG)	 AG	850-876	AA	GAA
-recovered Augustus_model.g42369.t1, terminal, 850, 876
-recovered Augustus_model.g42369.t1, internal, 105, 281
Couldn't classify 105, 281
Sorry, prediction GeneMark_model.111074_t fails validation.
(GAG)	 AG	105-281	GT	AGG
(TCG)	 AG	850-876	AA	GAA
-recovered GeneMark_model.111074_t, terminal, 850, 876
-recovered GeneMark_model.111074_t, internal, 105, 281

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1007
-exon list size: 2


building trellis

25.0    
50.0    
75.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support