-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3510

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g42368.t1
Couldn't classify 16, 243
Sorry, prediction GeneMark_model.111072_t fails validation.
(CTC)	 AG	16-243	GT	CGG
(GAG)	 AG	414-674	GT	AAG
-recovered GeneMark_model.111072_t, terminal, 414, 674
-recovered GeneMark_model.111072_t, internal, 16, 243
-recovered GeneMark_model.111072_t, internal, 414, 674
Valid prediction for snap_scaffold_3510-snap.1-T1
Valid prediction for GlimmerHMM_glimmerT_63378-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1008
-exon list size: 3


building trellis

20.0    
40.0    
60.0    
80.0    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support