-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3448

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 187, 328
Couldn't classify 941, 973
Sorry, prediction GeneMark_model.111037_t fails validation.
(GTC)	 AG	187-328	GT	CAG
(TAG)	 AG	356-366	GT	GGG
(GCC)	 AG	941-973	GT	GAG
-recovered GeneMark_model.111037_t, internal, 187, 328
-recovered GeneMark_model.111037_t, internal, 356, 366
-recovered GeneMark_model.111037_t, internal, 941, 973
Couldn't classify 187, 366
Couldn't classify 941, 1017
Sorry, prediction Augustus_model.g42352.t1 fails validation.
(GTC)	 AG	187-366	GT	GGG
(GCC)	 AG	941-1017		GA
-recovered Augustus_model.g42352.t1, internal, 187, 366

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1017
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support