-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3369

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 34, 51
Sorry, prediction GeneMark_model.110980_t fails validation.
(GGA)	 AG	34-51	GT	AGG
(AGA)	 AG	75-125	GT	GGG
(CGA)	 AG	151-204	GT	TGG
(GGG)	 AG	283-355	CT	AGC
-recovered GeneMark_model.110980_t, terminal, 283, 355
-recovered GeneMark_model.110980_t, internal, 34, 51
-recovered GeneMark_model.110980_t, internal, 75, 125
-recovered GeneMark_model.110980_t, internal, 151, 204

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 330, 389
Sorry, prediction GeneMark_model.110981_t fails validation.
(GGA)	 AG	330-389	GT	AGG
(GAA)	 AG	413-488	CA	GAC
-recovered GeneMark_model.110981_t, terminal, 413, 488
-recovered GeneMark_model.110981_t, internal, 330, 389

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1027
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support