-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3348

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 64, 119
Sorry, prediction Augustus_model.g42323.t1 fails validation.
(ATC)	 AG	64-119	GT	AGG
(ACT)	 AG	193-265	CT	AAC
-recovered Augustus_model.g42323.t1, terminal, 193, 265
-recovered Augustus_model.g42323.t1, internal, 64, 119
Couldn't classify 373, 438
Couldn't classify 873, 1015
Sorry, prediction GeneMark_model.110967_t fails validation.
(ATA)	 AG	373-438	GT	CTG
(GAG)	 AG	873-1015	GC	GGG
-recovered GeneMark_model.110967_t, internal, 373, 438
-recovered GeneMark_model.110967_t, internal, 873, 1015

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1030
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support