-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3326

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for Augustus_model.g42318.t1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 551, 762
Sorry, prediction snap_scaffold_3326-snap.1-T1 fails validation.
(TAG)	 AG	551-762	GT	GAG
-recovered snap_scaffold_3326-snap.1-T1, internal, 551, 762
Couldn't classify 36, 59
Couldn't classify 825, 1015
Sorry, prediction GeneMark_model.110949_t fails validation.
(GAA)	 AG	36-59	GT	AGG
(GGA)	 AG	98-256	GT	GGG
(AGA)	 AG	706-762	GT	GAG
(AAG)	 AG	783-794	GT	GAG
(GGA)	 AG	825-1015	GT	GAG
-recovered GeneMark_model.110949_t, internal, 36, 59
-recovered GeneMark_model.110949_t, internal, 98, 256
-recovered GeneMark_model.110949_t, internal, 706, 762
-recovered GeneMark_model.110949_t, internal, 783, 794
-recovered GeneMark_model.110949_t, internal, 825, 1015

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1033
-exon list size: 16


building trellis

5.6    
11.1    
16.7    
22.2    
27.8    
33.3    
38.9    
44.4    
50.0    
55.6    
61.1    
66.7    
72.2    
77.8    
83.3    
88.9    
94.4    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support