-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3208

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 211, 339
Sorry, prediction GeneMark_model.110872_t fails validation.
(AAG)	 AG	211-339	GT	AGG
(GGA)	 AG	387-430	TT	AGT
-recovered GeneMark_model.110872_t, terminal, 387, 430
-recovered GeneMark_model.110872_t, internal, 211, 339
Couldn't classify 211, 339
Couldn't classify 921, 1000
Sorry, prediction snap_scaffold_3208-snap.1-T1 fails validation.
(AAG)	 AG	211-339	GT	AGG
(GCT)	 AG	921-1000	GT	CAG
-recovered snap_scaffold_3208-snap.1-T1, internal, 211, 339
-recovered snap_scaffold_3208-snap.1-T1, internal, 921, 1000
Couldn't classify 211, 339
Couldn't classify 921, 1000
Sorry, prediction Augustus_model.g42288.t1 fails validation.
(AAG)	 AG	211-339	GT	AGG
(GCT)	 AG	921-1000	GT	CAG
-recovered Augustus_model.g42288.t1, internal, 211, 339
-recovered Augustus_model.g42288.t1, internal, 921, 1000

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1050
-exon list size: 6


building trellis

12.5    
25.0    
37.5    
50.0    
62.5    
75.0    
87.5    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support