-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3203

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_3203-snap.1-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 72, 115
Couldn't classify 948, 1039
Sorry, prediction GeneMark_model.110869_t fails validation.
(GAG)	 AG	72-115	GT	TGG
(CTG)	 AG	193-434	GT	CAG
(CCA)	 AG	463-524	GT	CAG
(GCA)	 AG	796-834	GT	TGG
(CAG)	 AG	948-1039	GC	CAG
-recovered GeneMark_model.110869_t, internal, 72, 115
-recovered GeneMark_model.110869_t, internal, 193, 434
-recovered GeneMark_model.110869_t, internal, 463, 524
-recovered GeneMark_model.110869_t, internal, 796, 834
-recovered GeneMark_model.110869_t, internal, 948, 1039
Valid prediction for GlimmerHMM_glimmerT_63316-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1051
-exon list size: 16


building trellis

5.6    
11.1    
16.7    
22.2    
27.8    
33.3    
38.9    
44.4    
50.0    
55.6    
61.1    
66.7    
72.2    
77.8    
83.3    
88.9    
94.4    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 1 predictions persist after filtering for low support