-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3202

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 32, 43
Couldn't classify 965, 1028
Sorry, prediction GeneMark_model.110868_t fails validation.
(GTA)	 AG	32-43	GT	GAG
(GGG)	 AG	71-79	GC	GAG
(GGA)	 AG	102-174	GT	AGG
(AGC)	 AG	726-772	GT	CCG
(GGA)	 AG	965-1028	GC	TGG
-recovered GeneMark_model.110868_t, internal, 32, 43
-recovered GeneMark_model.110868_t, internal, 71, 79
-recovered GeneMark_model.110868_t, internal, 102, 174
-recovered GeneMark_model.110868_t, internal, 726, 772
-recovered GeneMark_model.110868_t, internal, 965, 1028

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1051
-exon list size: 12


building trellis

7.1    
14.3    
21.4    
28.6    
35.7    
42.9    
50.0    
57.1    
64.3    
71.4    
78.6    
85.7    
92.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support