-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3200

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 371, 928
Sorry, prediction snap_scaffold_3200-snap.1-T1 fails validation.
(ATG)	 TT	86-267	GT	GGG
(CCC)	 AG	371-928	GT	ACG
-recovered snap_scaffold_3200-snap.1-T1, initial, 86, 267
-recovered snap_scaffold_3200-snap.1-T1, internal, 371, 928
Couldn't classify 121, 194
Couldn't classify 367, 755
Sorry, prediction GeneMark_model.110867_t fails validation.
(TCA)	 AG	121-194	GT	CAG
(ACA)	 AG	367-755	GT	CTG
-recovered GeneMark_model.110867_t, internal, 121, 194
-recovered GeneMark_model.110867_t, internal, 367, 755

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1051
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support