-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3155

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_3155-snap.1-T1
Couldn't classify 37, 102
Sorry, prediction GeneMark_model.110843_t fails validation.
(AGA)	 AG	37-102	GT	AGG
(GAA)	 AG	161-241	GT	GAG
(GCC)	 AG	506-536	AG	GAA
-recovered GeneMark_model.110843_t, terminal, 506, 536
-recovered GeneMark_model.110843_t, internal, 37, 102
-recovered GeneMark_model.110843_t, internal, 161, 241

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 26, 169
Sorry, prediction GeneMark_model.110844_t fails validation.
(TAC)	 AG	26-169	GT	GGG
(GAC)	 AG	260-266	GT	GAG
(GAG)	 AG	373-421	AA	GAA
-recovered GeneMark_model.110844_t, terminal, 373, 421
-recovered GeneMark_model.110844_t, internal, 26, 169
-recovered GeneMark_model.110844_t, internal, 260, 266

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1059
-exon list size: 13


building trellis

6.7    
13.3    
20.0    
26.7    
33.3    
40.0    
46.7    
53.3    
60.0    
66.7    
73.3    
80.0    
86.7    
93.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support