-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3094

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_3094-snap.1-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 609, 640
Couldn't classify 902, 948
Sorry, prediction GeneMark_model.110800_t fails validation.
(GCT)	 AG	609-640	GT	GAG
(AGG)	 AG	661-681	GT	AGG
(GAG)	 AG	713-772	GT	AGG
(AGG)	 AG	793-804	GT	AGG
(AGG)	 AG	827-838	GT	AGG
(AGG)	 AG	861-881	GT	AGG
(GAG)	 AG	902-948	GT	CAG
-recovered GeneMark_model.110800_t, internal, 609, 640
-recovered GeneMark_model.110800_t, internal, 661, 681
-recovered GeneMark_model.110800_t, internal, 713, 772
-recovered GeneMark_model.110800_t, internal, 793, 804
-recovered GeneMark_model.110800_t, internal, 827, 838
-recovered GeneMark_model.110800_t, internal, 861, 881
-recovered GeneMark_model.110800_t, internal, 902, 948

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1069
-exon list size: 19


building trellis

4.8    
9.5    
14.3    
19.0    
23.8    
28.6    
33.3    
38.1    
42.9    
47.6    
52.4    
57.1    
61.9    
66.7    
71.4    
76.2    
81.0    
85.7    
90.5    
95.2    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support