-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3074

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 32, 91
Couldn't classify 974, 979
Sorry, prediction GeneMark_model.110786_t fails validation.
(GGT)	 AG	32-91	GT	GAG
(GAG)	 AG	129-202	GT	AAG
(GAT)	 AG	335-347	GT	ACG
(AGA)	 AG	974-979	GT	AGG
-recovered GeneMark_model.110786_t, internal, 32, 91
-recovered GeneMark_model.110786_t, internal, 129, 202
-recovered GeneMark_model.110786_t, internal, 335, 347
-recovered GeneMark_model.110786_t, internal, 974, 979

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1073
-exon list size: 11


building trellis

7.7    
15.4    
23.1    
30.8    
38.5    
46.2    
53.8    
61.5    
69.2    
76.9    
84.6    
92.3    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support