-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3073

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 706, 875
Sorry, prediction Augustus_model.g42260.t1 fails validation.
(GAC)	 AG	706-875	GT	TTG
-recovered Augustus_model.g42260.t1, internal, 706, 875
Couldn't classify 467, 627
Sorry, prediction GeneMark_model.110785_t fails validation.
(AGA)	 AG	467-627	GT	CCG
(GAC)	 AG	706-779	GT	ATG
(CAA)	 AG	812-862	GC	GAG
-recovered GeneMark_model.110785_t, terminal, 812, 862
-recovered GeneMark_model.110785_t, internal, 467, 627
-recovered GeneMark_model.110785_t, internal, 706, 779
-recovered GeneMark_model.110785_t, internal, 812, 862

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1073
-exon list size: 8


building trellis

10.0    
20.0    
30.0    
40.0    
50.0    
60.0    
70.0    
80.0    
90.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support