-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3056 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Couldn't classify 283, 354 Couldn't classify 1035, 1058 Sorry, prediction GeneMark_model.110772_t fails validation. (GCC) AG 283-354 GT ACG (GAC) AG 382-452 GT GAG (AAT) AG 479-517 GT AGG (AAA) AG 540-560 GT GAG (GGG) AG 600-756 GT CGG (CAG) AG 786-865 GT CTG (GTG) AG 961-996 GT GGG (AGA) AG 1035-1058 GT GAG -recovered GeneMark_model.110772_t, internal, 283, 354 -recovered GeneMark_model.110772_t, internal, 382, 452 -recovered GeneMark_model.110772_t, internal, 479, 517 -recovered GeneMark_model.110772_t, internal, 540, 560 -recovered GeneMark_model.110772_t, internal, 600, 756 -recovered GeneMark_model.110772_t, internal, 786, 865 -recovered GeneMark_model.110772_t, internal, 961, 996 -recovered GeneMark_model.110772_t, internal, 1035, 1058 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -) -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -) -building DP trellis -building trellis in range 1 - 1075 -exon list size: 18 building trellis 5.0 10.0 15.0 20.0 25.0 30.0 35.0 40.0 45.0 50.0 55.0 60.0 65.0 70.0 75.0 80.0 85.0 90.0 95.0 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support