-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3041 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GlimmerHMM_glimmerT_63272-T1 Couldn't classify 77, 181 Couldn't classify 660, 798 Sorry, prediction snap_scaffold_3041-snap.1-T1 fails validation. (GTG) AG 77-181 GT AGG (GAG) AG 660-798 GT TGG -recovered snap_scaffold_3041-snap.1-T1, internal, 77, 181 -recovered snap_scaffold_3041-snap.1-T1, internal, 660, 798 Couldn't classify 77, 181 Couldn't classify 660, 798 Sorry, prediction GeneMark_model.110763_t fails validation. (GTG) AG 77-181 GT AGG (GAG) AG 660-798 GT TGG -recovered GeneMark_model.110763_t, internal, 77, 181 -recovered GeneMark_model.110763_t, internal, 660, 798 Couldn't classify 77, 181 Sorry, prediction Augustus_model.g42249.t1 fails validation. (GTG) AG 77-181 GT AGG (GAG) AG 660-854 TC AGT -recovered Augustus_model.g42249.t1, terminal, 660, 854 -recovered Augustus_model.g42249.t1, internal, 77, 181 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -) -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -) -building DP trellis -building trellis in range 1 - 1078 -exon list size: 4 building trellis 16.7 33.3 50.0 66.7 83.3 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 1 predictions persist after filtering for low support