-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3037

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 740, 1019
Sorry, prediction snap_scaffold_3037-snap.1-T1 fails validation.
(GAG)	 AG	740-1019	GT	GCG
-recovered snap_scaffold_3037-snap.1-T1, internal, 740, 1019
Couldn't classify 879, 1062
Sorry, prediction GeneMark_model.110761_t fails validation.
(ATG)	 GG	355-374	GT	GGG
(GGT)	 AG	402-479	GT	AGG
(GGC)	 AG	879-1062	GC	GGG
-recovered GeneMark_model.110761_t, initial, 355, 374
-recovered GeneMark_model.110761_t, internal, 402, 479
-recovered GeneMark_model.110761_t, internal, 879, 1062
Valid prediction for GeneMark_model.110760_t
add_exon() Sorry, GeneMark_model.110760_t 75-255-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1078
-exon list size: 5


building trellis

14.3    
28.6    
42.9    
57.1    
71.4    
85.7    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support