-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_302

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_302-snap.1-T1
Valid prediction for GeneMark_model.107235_t
Couldn't classify 40, 87
Sorry, prediction GeneMark_model.107233_t fails validation.
(GGT)	 AG	40-87	GT	GTG
(AGA)	 AG	259-285	GC	GAG
(AAA)	 AG	313-433	AA	AAA
-recovered GeneMark_model.107233_t, terminal, 313, 433
-recovered GeneMark_model.107233_t, internal, 40, 87
-recovered GeneMark_model.107233_t, internal, 259, 285

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_61661-T1
Valid prediction for GeneMark_model.107236_t
Valid prediction for GeneMark_model.107234_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 8415
-exon list size: 47


building trellis

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-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support