-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3/scaffold_3_7382397-7716412 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.11521_t Valid prediction for Augustus_model.g4552.t1 Valid prediction for GeneMark_model.11515_t Valid prediction for snap_scaffold_3-snap.1550-T1 Valid prediction for Augustus_model.g4581.t1 Valid prediction for GeneMark_model.11523_t Valid prediction for snap_scaffold_3-snap.1511-T1 Valid prediction for GeneMark_model.11532_t Valid prediction for snap_scaffold_3-snap.1545-T1 Valid prediction for GlimmerHMM_glimmerT_6953-T1 Valid prediction for GeneMark_model.11503_t Valid prediction for GlimmerHMM_glimmerT_6948-T1 Valid prediction for Augustus_model.g4591.t1 Valid prediction for CodingQuarry_transcript_46095-T1 Valid prediction for GeneMark_model.11526_t Valid prediction for GlimmerHMM_glimmerT_6952-T1 Valid prediction for GeneMark_model.11560_t Valid prediction for Augustus_model.g4590.t1 Valid prediction for GlimmerHMM_glimmerT_6959-T1 Valid prediction for snap_scaffold_3-snap.1521-T1 Valid prediction for GeneMark_model.11582_t Valid prediction for Augustus_model.g4588.t1 Valid prediction for GlimmerHMM_glimmerT_6976-T1 Valid prediction for snap_scaffold_3-snap.1576-T1 Valid prediction for GeneMark_model.11507_t Valid prediction for snap_scaffold_3-snap.1513-T1 Valid prediction for GlimmerHMM_glimmerT_6943-T1 Valid prediction for GeneMark_model.11534_t Valid prediction for GeneMark_model.11547_t Valid prediction for GeneMark_model.11492_t Valid prediction for GlimmerHMM_glimmerT_6949-T1 Valid prediction for snap_scaffold_3-snap.1508-T1 Valid prediction for GeneMark_model.11499_t Valid prediction for snap_scaffold_3-snap.1551-T1 Valid prediction for snap_scaffold_3-snap.1537-T1 Valid prediction for GlimmerHMM_glimmerT_6969-T1 Valid prediction for GeneMark_model.11561_t Valid prediction for snap_scaffold_3-snap.1572-T1 Valid prediction for snap_scaffold_3-snap.1557-T1 Sorry, intron length (3) is less than minimum required (10) Sorry, intron length (3) is less than minimum required (10) Valid prediction for snap_scaffold_3-snap.1570-T1 Valid prediction for GeneMark_model.11546_t Valid prediction for CodingQuarry_transcript_46097-T1 Valid prediction for snap_scaffold_3-snap.1539-T1 Valid prediction for GeneMark_model.11585_t Valid prediction for GeneMark_model.11553_t Valid prediction for snap_scaffold_3-snap.1549-T1 Valid prediction for GeneMark_model.11489_t Valid prediction for GeneMark_model.11577_t Valid prediction for snap_scaffold_3-snap.1544-T1 Valid prediction for GeneMark_model.11563_t Valid prediction for Augustus_model.g4560.t1 Valid prediction for snap_scaffold_3-snap.1566-T1 Valid prediction for snap_scaffold_3-snap.1504-T1 Valid prediction for GeneMark_model.11520_t Valid prediction for GlimmerHMM_glimmerT_6967-T1 Valid prediction for Augustus_model.g4583.t1 Valid prediction for GlimmerHMM_glimmerT_6982-T1 Valid prediction for GlimmerHMM_glimmerT_6951-T1 Valid prediction for Augustus_model.g4572.t1 Valid prediction for GlimmerHMM_glimmerT_6988-T1 Valid prediction for GeneMark_model.11505_t Valid prediction for snap_scaffold_3-snap.1563-T1 Valid prediction for GeneMark_model.11567_t Valid prediction for snap_scaffold_3-snap.1530-T1 Valid prediction for pasa_asmbl_40123.p1 Valid prediction for GlimmerHMM_glimmerT_6965-T1 Valid prediction for GeneMark_model.11548_t Valid prediction for snap_scaffold_3-snap.1531-T1 Sorry, intron length (7) is less than minimum required (10) Valid prediction for GeneMark_model.11494_t Valid prediction for GeneMark_model.11541_t Valid prediction for Augustus_model.g4580.t1 Valid prediction for GeneMark_model.11488_t Valid prediction for GeneMark_model.11498_t Valid prediction for GeneMark_model.11530_t Valid prediction for GlimmerHMM_glimmerT_6993-T1 Valid prediction for GeneMark_model.11579_t Valid prediction for GeneMark_model.11581_t Valid prediction for GeneMark_model.11551_t Valid prediction for GeneMark_model.11491_t Valid prediction for GlimmerHMM_glimmerT_6974-T1 Valid prediction for Augustus_model.g4567.t1 Valid prediction for snap_scaffold_3-snap.1559-T1 Valid prediction for GlimmerHMM_glimmerT_6977-T1 Valid prediction for GlimmerHMM_glimmerT_6979-T1 Valid prediction for snap_scaffold_3-snap.1573-T1 Couldn't classify 39437, 39710 Sorry, prediction pasa_asmbl_40120.p1 fails validation. (CAG) AG 39437-39710 GT AGG (TTA) AG 39824-39955 GT CAG (TTC) AG 40059-40163 GT AGG (TTC) AG 40328-40414 GT AGG (AGC) AG 40517-40545 GT GGG (GAT) AG 40636-40677 AG GAA -recovered pasa_asmbl_40120.p1, terminal, 40636, 40677 -recovered pasa_asmbl_40120.p1, internal, 39437, 39710 -recovered pasa_asmbl_40120.p1, internal, 39824, 39955 -recovered pasa_asmbl_40120.p1, internal, 40059, 40163 -recovered pasa_asmbl_40120.p1, internal, 40328, 40414 -recovered pasa_asmbl_40120.p1, internal, 40517, 40545 Valid prediction for snap_scaffold_3-snap.1527-T1 Valid prediction for snap_scaffold_3-snap.1512-T1 Valid prediction for snap_scaffold_3-snap.1536-T1 Valid prediction for snap_scaffold_3-snap.1579-T1 Valid prediction for GeneMark_model.11508_t Valid prediction for GlimmerHMM_glimmerT_6971-T1 Valid prediction for GlimmerHMM_glimmerT_6972-T1 Valid prediction for Augustus_model.g4570.t1 Valid prediction for snap_scaffold_3-snap.1533-T1 Valid prediction for GeneMark_model.11556_t Valid prediction for Augustus_model.g4573.t1 Valid prediction for GeneMark_model.11569_t Valid prediction for GeneMark_model.11539_t Valid prediction for snap_scaffold_3-snap.1520-T1 Valid prediction for GeneMark_model.11501_t Valid prediction for CodingQuarry_transcript_46094-T1 Valid prediction for CodingQuarry_transcript_46096-T1 Valid prediction for GeneMark_model.11514_t Valid prediction for GeneMark_model.11550_t Valid prediction for GlimmerHMM_glimmerT_6950-T1 Valid prediction for pasa_asmbl_40125.p1 Valid prediction for GeneMark_model.11549_t Valid prediction for snap_scaffold_3-snap.1525-T1 Valid prediction for Augustus_model.g4576.t1 Couldn't classify 38291, 38549 Couldn't classify 38910, 38950 Sorry, prediction pasa_asmbl_40804.p1 fails validation. (ACG) TC 38291-38549 GT ATG (TCA) AG 38910-38950 AA GCA Valid prediction for GlimmerHMM_glimmerT_6995-T1 Valid prediction for Augustus_model.g4556.t1 Valid prediction for HiQ_model.g4577.t1 Valid prediction for snap_scaffold_3-snap.1568-T1 Valid prediction for snap_scaffold_3-snap.1522-T1 Valid prediction for snap_scaffold_3-snap.1554-T1 Valid prediction for snap_scaffold_3-snap.1519-T1 Valid prediction for snap_scaffold_3-snap.1509-T1 Valid prediction for GeneMark_model.11528_t Valid prediction for GlimmerHMM_glimmerT_6975-T1 Valid prediction for GlimmerHMM_glimmerT_6945-T1 Valid prediction for GeneMark_model.11525_t Valid prediction for GlimmerHMM_glimmerT_6961-T1 Valid prediction for GlimmerHMM_glimmerT_6956-T1 Valid prediction for snap_scaffold_3-snap.1517-T1 Valid prediction for GeneMark_model.11558_t Valid prediction for GeneMark_model.11490_t Valid prediction for GlimmerHMM_glimmerT_6955-T1 Valid prediction for Augustus_model.g4561.t1 Valid prediction for GlimmerHMM_glimmerT_6942-T1 Valid prediction for GeneMark_model.11545_t Valid prediction for GeneMark_model.11537_t Valid prediction for GlimmerHMM_glimmerT_6981-T1 Valid prediction for Augustus_model.g4563.t1 Valid prediction for GeneMark_model.11583_t Valid prediction for GlimmerHMM_glimmerT_6962-T1 Valid prediction for GlimmerHMM_glimmerT_6994-T1 Valid prediction for GeneMark_model.11572_t Valid prediction for GlimmerHMM_glimmerT_6984-T1 Valid prediction for GeneMark_model.11496_t Valid prediction for GeneMark_model.11510_t Valid prediction for snap_scaffold_3-snap.1560-T1 Sorry, intron length (3) is less than minimum required (10) Valid prediction for Augustus_model.g4566.t1 Valid prediction for GeneMark_model.11575_t Valid prediction for Augustus_model.g4575.t1 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_3-snap.1564-T1 Valid prediction for GlimmerHMM_glimmerT_6992-T1 Valid prediction for snap_scaffold_3-snap.1556-T1 Valid prediction for snap_scaffold_3-snap.1543-T1 Valid prediction for snap_scaffold_3-snap.1548-T1 Valid prediction for Augustus_model.g4562.t1 Valid prediction for snap_scaffold_3-snap.1555-T1 Valid prediction for Augustus_model.g4555.t1 Valid prediction for GeneMark_model.11566_t Valid prediction for snap_scaffold_3-snap.1515-T1 Valid prediction for snap_scaffold_3-snap.1514-T1 Valid prediction for snap_scaffold_3-snap.1501-T1 Valid prediction for GeneMark_model.11536_t Valid prediction for snap_scaffold_3-snap.1575-T1 Valid prediction for snap_scaffold_3-snap.1507-T1 Valid prediction for GlimmerHMM_glimmerT_6944-T1 Valid prediction for snap_scaffold_3-snap.1553-T1 Sorry, intron length (5) is less than minimum required (10) Valid prediction for GeneMark_model.11506_t Valid prediction for snap_scaffold_3-snap.1542-T1 Valid prediction for snap_scaffold_3-snap.1561-T1 Valid prediction for GlimmerHMM_glimmerT_6963-T1 Valid prediction for snap_scaffold_3-snap.1506-T1 Valid prediction for GeneMark_model.11542_t Valid prediction for snap_scaffold_3-snap.1503-T1 Sorry, intron length (4) is less than minimum required (10) Valid prediction for GeneMark_model.11538_t Valid prediction for snap_scaffold_3-snap.1541-T1 Valid prediction for snap_scaffold_3-snap.1565-T1 Valid prediction for GeneMark_model.11500_t Valid prediction for GlimmerHMM_glimmerT_6996-T1 Valid prediction for GeneMark_model.11576_t Valid prediction for Augustus_model.g4558.t1 Couldn't classify 301561, 301663 Sorry, prediction pasa_asmbl_39723.p1 fails validation. (ATG) CC 301092-301202 GT AGG (AGT) AG 301309-301469 GT AGG (GAA) AG 301561-301663 GC AGG -recovered pasa_asmbl_39723.p1, initial, 301092, 301202 -recovered pasa_asmbl_39723.p1, internal, 301309, 301469 -recovered pasa_asmbl_39723.p1, internal, 301561, 301663 Valid prediction for GeneMark_model.11565_t Couldn't classify 86936, 87439 Sorry, prediction pasa_asmbl_38922.p1 fails validation. (CAG) CC 86936-87439 GG ATG Valid prediction for GeneMark_model.11570_t Valid prediction for Augustus_model.g4574.t1 Valid prediction for snap_scaffold_3-snap.1510-T1 Valid prediction for GlimmerHMM_glimmerT_6987-T1 Valid prediction for CodingQuarry_transcript_46093-T1 Valid prediction for GeneMark_model.11571_t Valid prediction for GeneMark_model.11574_t Valid prediction for GeneMark_model.11511_t Valid prediction for GlimmerHMM_glimmerT_6973-T1 Valid prediction for Augustus_model.g4553.t1 Valid prediction for GeneMark_model.11543_t Valid prediction for GeneMark_model.11564_t Valid prediction for CodingQuarry_transcript_46101-T1 Valid prediction for GeneMark_model.11495_t Valid prediction for GlimmerHMM_glimmerT_6989-T1 Valid prediction for GlimmerHMM_glimmerT_6990-T1 Valid prediction for snap_scaffold_3-snap.1505-T1 Valid prediction for snap_scaffold_3-snap.1574-T1 Valid prediction for GeneMark_model.11522_t Valid prediction for GeneMark_model.11552_t Valid prediction for Augustus_model.g4582.t1 Valid prediction for GlimmerHMM_glimmerT_6957-T1 Valid prediction for GeneMark_model.11578_t Valid prediction for HiQ_model.g4592.t1 Valid prediction for GeneMark_model.11509_t Valid prediction for snap_scaffold_3-snap.1558-T1 Valid prediction for GlimmerHMM_glimmerT_6947-T1 Valid prediction for GeneMark_model.11580_t Valid prediction for GlimmerHMM_glimmerT_6964-T1 Valid prediction for snap_scaffold_3-snap.1524-T1 Valid prediction for GeneMark_model.11559_t Valid prediction for snap_scaffold_3-snap.1516-T1 Valid prediction for Augustus_model.g4585.t1 Valid prediction for GlimmerHMM_glimmerT_6986-T1 Valid prediction for snap_scaffold_3-snap.1567-T1 Valid prediction for snap_scaffold_3-snap.1529-T1 Valid prediction for CodingQuarry_transcript_46100-T1 Valid prediction for GlimmerHMM_glimmerT_6960-T1 Valid prediction for GlimmerHMM_glimmerT_6983-T1 Valid prediction for GeneMark_model.11555_t Valid prediction for GlimmerHMM_glimmerT_6970-T1 Valid prediction for GeneMark_model.11584_t Valid prediction for GlimmerHMM_glimmerT_6968-T1 Valid prediction for CodingQuarry_transcript_46099-T1 Valid prediction for GlimmerHMM_glimmerT_6980-T1 Valid prediction for Augustus_model.g4568.t1 Valid prediction for snap_scaffold_3-snap.1577-T1 Valid prediction for Augustus_model.g4559.t1 Valid prediction for snap_scaffold_3-snap.1547-T1 Valid prediction for snap_scaffold_3-snap.1578-T1 Valid prediction for GeneMark_model.11544_t Valid prediction for snap_scaffold_3-snap.1526-T1 Valid prediction for GeneMark_model.11518_t Valid prediction for GeneMark_model.11557_t Valid prediction for GlimmerHMM_glimmerT_6958-T1 Valid prediction for snap_scaffold_3-snap.1535-T1 Valid prediction for snap_scaffold_3-snap.1540-T1 Valid prediction for GlimmerHMM_glimmerT_6966-T1 Valid prediction for GeneMark_model.11533_t Valid prediction for GeneMark_model.11497_t Valid prediction for Augustus_model.g4564.t1 Valid prediction for GeneMark_model.11524_t Valid prediction for Augustus_model.g4589.t1 Valid prediction for Augustus_model.g4578.t1 Valid prediction for GlimmerHMM_glimmerT_6991-T1 Valid prediction for GeneMark_model.11531_t Valid prediction for GeneMark_model.11502_t Valid prediction for snap_scaffold_3-snap.1528-T1 Valid prediction for snap_scaffold_3-snap.1538-T1 Valid prediction for snap_scaffold_3-snap.1500-T1 Valid prediction for snap_scaffold_3-snap.1518-T1 Valid prediction for GeneMark_model.11493_t Valid prediction for GlimmerHMM_glimmerT_6954-T1 Valid prediction for snap_scaffold_3-snap.1532-T1 Valid prediction for snap_scaffold_3-snap.1523-T1 Valid prediction for Augustus_model.g4584.t1 Valid prediction for Augustus_model.g4569.t1 Valid prediction for GeneMark_model.11562_t Valid prediction for Augustus_model.g4579.t1 Valid prediction for GeneMark_model.11573_t Valid prediction for GeneMark_model.11504_t Valid prediction for snap_scaffold_3-snap.1569-T1 Valid prediction for snap_scaffold_3-snap.1546-T1 Valid prediction for GeneMark_model.11516_t Valid prediction for Augustus_model.g4565.t1 Valid prediction for GlimmerHMM_glimmerT_6985-T1 Valid prediction for snap_scaffold_3-snap.1552-T1 Valid prediction for HiQ_model.g4587.t1 Valid prediction for GeneMark_model.11517_t Valid prediction for GeneMark_model.11512_t Valid prediction for Augustus_model.g4551.t1 Valid prediction for GeneMark_model.11568_t Valid prediction for snap_scaffold_3-snap.1534-T1 Valid prediction for GeneMark_model.11527_t Valid prediction for snap_scaffold_3-snap.1562-T1 Valid prediction for pasa_asmbl_38928.p1 Valid prediction for GlimmerHMM_glimmerT_6946-T1 Valid prediction for GeneMark_model.11529_t Valid prediction for snap_scaffold_3-snap.1571-T1 Valid prediction for Augustus_model.g4586.t1 Valid prediction for CodingQuarry_transcript_46092-T1 Valid prediction for pasa_asmbl_38924.p1 Valid prediction for snap_scaffold_3-snap.1502-T1 Valid prediction for Augustus_model.g4557.t1 Valid prediction for GeneMark_model.11519_t Valid prediction for Augustus_model.g4554.t1 Valid prediction for Augustus_model.g4571.t1 Valid prediction for GeneMark_model.11513_t Valid prediction for GeneMark_model.11540_t Valid prediction for GlimmerHMM_glimmerT_6978-T1 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -)Error with prediction: snap lend_intergenic: 22019, rend_intergenic: 18332 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44274, rend_intergenic: 44187 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53827, rend_intergenic: 44294 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 69073, rend_intergenic: 58480 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72502, rend_intergenic: 70405 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85629, rend_intergenic: 74044 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 92106, rend_intergenic: 85670 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 95698, rend_intergenic: 92217 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105132, rend_intergenic: 100130 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127752, rend_intergenic: 113359 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146771, rend_intergenic: 135478 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149763, rend_intergenic: 146773 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 159838, rend_intergenic: 150558 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166688, rend_intergenic: 160246 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172839, rend_intergenic: 167574 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 194357, rend_intergenic: 186121 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 210234, rend_intergenic: 206409 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 224246, rend_intergenic: 220744 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234800, rend_intergenic: 224677 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 235746, rend_intergenic: 235121 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 240235, rend_intergenic: 236223 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 247289, rend_intergenic: 240449 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 274938, rend_intergenic: 269994 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 280356, rend_intergenic: 276433 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 286073, rend_intergenic: 281177 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 288046, rend_intergenic: 287438 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 296097, rend_intergenic: 292231 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 313718, rend_intergenic: 298733 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 322870, rend_intergenic: 317697 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 331049, rend_intergenic: 328483 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -building DP trellis -building trellis in range 1 - 334016 -exon list size: 1480 building trellis 0.1 0.1 0.2 0.3 0.3 0.4 0.5 0.5 0.6 0.7 0.7 0.8 0.9 0.9 1.0 1.1 1.1 1.2 1.3 1.3 1.4 1.5 1.6 1.6 1.7 1.8 1.8 1.9 2.0 2.0 2.1 2.2 2.2 2.3 2.4 2.4 2.5 2.6 2.6 2.7 2.8 2.8 2.9 3.0 3.0 3.1 3.2 3.2 3.3 3.4 3.4 3.5 3.6 3.6 3.7 3.8 3.8 3.9 4.0 4.0 4.1 4.2 4.3 4.3 4.4 4.5 4.5 4.6 4.7 4.7 4.8 4.9 4.9 5.0 5.1 5.1 5.2 5.3 5.3 5.4 5.5 5.5 5.6 5.7 5.7 5.8 5.9 5.9 6.0 6.1 6.1 6.2 6.3 6.3 6.4 6.5 6.5 6.6 6.7 6.7 6.8 6.9 7.0 7.0 7.1 7.2 7.2 7.3 7.4 7.4 7.5 7.6 7.6 7.7 7.8 7.8 7.9 8.0 8.0 8.1 8.2 8.2 8.3 8.4 8.4 8.5 8.6 8.6 8.7 8.8 8.8 8.9 9.0 9.0 9.1 9.2 9.2 9.3 9.4 9.4 9.5 9.6 9.6 9.7 9.8 9.9 9.9 10.0 10.1 10.1 10.2 10.3 10.3 10.4 10.5 10.5 10.6 10.7 10.7 10.8 10.9 10.9 11.0 11.1 11.1 11.2 11.3 11.3 11.4 11.5 11.5 11.6 11.7 11.7 11.8 11.9 11.9 12.0 12.1 12.1 12.2 12.3 12.3 12.4 12.5 12.6 12.6 12.7 12.8 12.8 12.9 13.0 13.0 13.1 13.2 13.2 13.3 13.4 13.4 13.5 13.6 13.6 13.7 13.8 13.8 13.9 14.0 14.0 14.1 14.2 14.2 14.3 14.4 14.4 14.5 14.6 14.6 14.7 14.8 14.8 14.9 15.0 15.0 15.1 15.2 15.2 15.3 15.4 15.5 15.5 15.6 15.7 15.7 15.8 15.9 15.9 16.0 16.1 16.1 16.2 16.3 16.3 16.4 16.5 16.5 16.6 16.7 16.7 16.8 16.9 16.9 17.0 17.1 17.1 17.2 17.3 17.3 17.4 17.5 17.5 17.6 17.7 17.7 17.8 17.9 17.9 18.0 18.1 18.2 18.2 18.3 18.4 18.4 18.5 18.6 18.6 18.7 18.8 18.8 18.9 19.0 19.0 19.1 19.2 19.2 19.3 19.4 19.4 19.5 19.6 19.6 19.7 19.8 19.8 19.9 20.0 20.0 20.1 20.2 20.2 20.3 20.4 20.4 20.5 20.6 20.6 20.7 20.8 20.9 20.9 21.0 21.1 21.1 21.2 21.3 21.3 21.4 21.5 21.5 21.6 21.7 21.7 21.8 21.9 21.9 22.0 22.1 22.1 22.2 22.3 22.3 22.4 22.5 22.5 22.6 22.7 22.7 22.8 22.9 22.9 23.0 23.1 23.1 23.2 23.3 23.3 23.4 23.5 23.5 23.6 23.7 23.8 23.8 23.9 24.0 24.0 24.1 24.2 24.2 24.3 24.4 24.4 24.5 24.6 24.6 24.7 24.8 24.8 24.9 25.0 25.0 25.1 25.2 25.2 25.3 25.4 25.4 25.5 25.6 25.6 25.7 25.8 25.8 25.9 26.0 26.0 26.1 26.2 26.2 26.3 26.4 26.5 26.5 26.6 26.7 26.7 26.8 26.9 26.9 27.0 27.1 27.1 27.2 27.3 27.3 27.4 27.5 27.5 27.6 27.7 27.7 27.8 27.9 27.9 28.0 28.1 28.1 28.2 28.3 28.3 28.4 28.5 28.5 28.6 28.7 28.7 28.8 28.9 28.9 29.0 29.1 29.1 29.2 29.3 29.4 29.4 29.5 29.6 29.6 29.7 29.8 29.8 29.9 30.0 30.0 30.1 30.2 30.2 30.3 30.4 30.4 30.5 30.6 30.6 30.7 30.8 30.8 30.9 31.0 31.0 31.1 31.2 31.2 31.3 31.4 31.4 31.5 31.6 31.6 31.7 31.8 31.8 31.9 32.0 32.1 32.1 32.2 32.3 32.3 32.4 32.5 32.5 32.6 32.7 32.7 32.8 32.9 32.9 33.0 33.1 33.1 33.2 33.3 33.3 33.4 33.5 33.5 33.6 33.7 33.7 33.8 33.9 33.9 34.0 34.1 34.1 34.2 34.3 34.3 34.4 34.5 34.5 34.6 34.7 34.8 34.8 34.9 35.0 35.0 35.1 35.2 35.2 35.3 35.4 35.4 35.5 35.6 35.6 35.7 35.8 35.8 35.9 36.0 36.0 36.1 36.2 36.2 36.3 36.4 36.4 36.5 36.6 36.6 36.7 36.8 36.8 36.9 37.0 37.0 37.1 37.2 37.2 37.3 37.4 37.4 37.5 37.6 37.7 37.7 37.8 37.9 37.9 38.0 38.1 38.1 38.2 38.3 38.3 38.4 38.5 38.5 38.6 38.7 38.7 38.8 38.9 38.9 39.0 39.1 39.1 39.2 39.3 39.3 39.4 39.5 39.5 39.6 39.7 39.7 39.8 39.9 39.9 40.0 40.1 40.1 40.2 40.3 40.4 40.4 40.5 40.6 40.6 40.7 40.8 40.8 40.9 41.0 41.0 41.1 41.2 41.2 41.3 41.4 41.4 41.5 41.6 41.6 41.7 41.8 41.8 41.9 42.0 42.0 42.1 42.2 42.2 42.3 42.4 42.4 42.5 42.6 42.6 42.7 42.8 42.8 42.9 43.0 43.0 43.1 43.2 43.3 43.3 43.4 43.5 43.5 43.6 43.7 43.7 43.8 43.9 43.9 44.0 44.1 44.1 44.2 44.3 44.3 44.4 44.5 44.5 44.6 44.7 44.7 44.8 44.9 44.9 45.0 45.1 45.1 45.2 45.3 45.3 45.4 45.5 45.5 45.6 45.7 45.7 45.8 45.9 46.0 46.0 46.1 46.2 46.2 46.3 46.4 46.4 46.5 46.6 46.6 46.7 46.8 46.8 46.9 47.0 47.0 47.1 47.2 47.2 47.3 47.4 47.4 47.5 47.6 47.6 47.7 47.8 47.8 47.9 48.0 48.0 48.1 48.2 48.2 48.3 48.4 48.4 48.5 48.6 48.7 48.7 48.8 48.9 48.9 49.0 49.1 49.1 49.2 49.3 49.3 49.4 49.5 49.5 49.6 49.7 49.7 49.8 49.9 49.9 50.0 50.1 50.1 50.2 50.3 50.3 50.4 50.5 50.5 50.6 50.7 50.7 50.8 50.9 50.9 51.0 51.1 51.1 51.2 51.3 51.3 51.4 51.5 51.6 51.6 51.7 51.8 51.8 51.9 52.0 52.0 52.1 52.2 52.2 52.3 52.4 52.4 52.5 52.6 52.6 52.7 52.8 52.8 52.9 53.0 53.0 53.1 53.2 53.2 53.3 53.4 53.4 53.5 53.6 53.6 53.7 53.8 53.8 53.9 54.0 54.0 54.1 54.2 54.3 54.3 54.4 54.5 54.5 54.6 54.7 54.7 54.8 54.9 54.9 55.0 55.1 55.1 55.2 55.3 55.3 55.4 55.5 55.5 55.6 55.7 55.7 55.8 55.9 55.9 56.0 56.1 56.1 56.2 56.3 56.3 56.4 56.5 56.5 56.6 56.7 56.7 56.8 56.9 57.0 57.0 57.1 57.2 57.2 57.3 57.4 57.4 57.5 57.6 57.6 57.7 57.8 57.8 57.9 58.0 58.0 58.1 58.2 58.2 58.3 58.4 58.4 58.5 58.6 58.6 58.7 58.8 58.8 58.9 59.0 59.0 59.1 59.2 59.2 59.3 59.4 59.4 59.5 59.6 59.6 59.7 59.8 59.9 59.9 60.0 60.1 60.1 60.2 60.3 60.3 60.4 60.5 60.5 60.6 60.7 60.7 60.8 60.9 60.9 61.0 61.1 61.1 61.2 61.3 61.3 61.4 61.5 61.5 61.6 61.7 61.7 61.8 61.9 61.9 62.0 62.1 62.1 62.2 62.3 62.3 62.4 62.5 62.6 62.6 62.7 62.8 62.8 62.9 63.0 63.0 63.1 63.2 63.2 63.3 63.4 63.4 63.5 63.6 63.6 63.7 63.8 63.8 63.9 64.0 64.0 64.1 64.2 64.2 64.3 64.4 64.4 64.5 64.6 64.6 64.7 64.8 64.8 64.9 65.0 65.0 65.1 65.2 65.2 65.3 65.4 65.5 65.5 65.6 65.7 65.7 65.8 65.9 65.9 66.0 66.1 66.1 66.2 66.3 66.3 66.4 66.5 66.5 66.6 66.7 66.7 66.8 66.9 66.9 67.0 67.1 67.1 67.2 67.3 67.3 67.4 67.5 67.5 67.6 67.7 67.7 67.8 67.9 67.9 68.0 68.1 68.2 68.2 68.3 68.4 68.4 68.5 68.6 68.6 68.7 68.8 68.8 68.9 69.0 69.0 69.1 69.2 69.2 69.3 69.4 69.4 69.5 69.6 69.6 69.7 69.8 69.8 69.9 70.0 70.0 70.1 70.2 70.2 70.3 70.4 70.4 70.5 70.6 70.6 70.7 70.8 70.9 70.9 71.0 71.1 71.1 71.2 71.3 71.3 71.4 71.5 71.5 71.6 71.7 71.7 71.8 71.9 71.9 72.0 72.1 72.1 72.2 72.3 72.3 72.4 72.5 72.5 72.6 72.7 72.7 72.8 72.9 72.9 73.0 73.1 73.1 73.2 73.3 73.3 73.4 73.5 73.5 73.6 73.7 73.8 73.8 73.9 74.0 74.0 74.1 74.2 74.2 74.3 74.4 74.4 74.5 74.6 74.6 74.7 74.8 74.8 74.9 75.0 75.0 75.1 75.2 75.2 75.3 75.4 75.4 75.5 75.6 75.6 75.7 75.8 75.8 75.9 76.0 76.0 76.1 76.2 76.2 76.3 76.4 76.5 76.5 76.6 76.7 76.7 76.8 76.9 76.9 77.0 77.1 77.1 77.2 77.3 77.3 77.4 77.5 77.5 77.6 77.7 77.7 77.8 77.9 77.9 78.0 78.1 78.1 78.2 78.3 78.3 78.4 78.5 78.5 78.6 78.7 78.7 78.8 78.9 78.9 79.0 79.1 79.1 79.2 79.3 79.4 79.4 79.5 79.6 79.6 79.7 79.8 79.8 79.9 80.0 80.0 80.1 80.2 80.2 80.3 80.4 80.4 80.5 80.6 80.6 80.7 80.8 80.8 80.9 81.0 81.0 81.1 81.2 81.2 81.3 81.4 81.4 81.5 81.6 81.6 81.7 81.8 81.8 81.9 82.0 82.1 82.1 82.2 82.3 82.3 82.4 82.5 82.5 82.6 82.7 82.7 82.8 82.9 82.9 83.0 83.1 83.1 83.2 83.3 83.3 83.4 83.5 83.5 83.6 83.7 83.7 83.8 83.9 83.9 84.0 84.1 84.1 84.2 84.3 84.3 84.4 84.5 84.5 84.6 84.7 84.8 84.8 84.9 85.0 85.0 85.1 85.2 85.2 85.3 85.4 85.4 85.5 85.6 85.6 85.7 85.8 85.8 85.9 86.0 86.0 86.1 86.2 86.2 86.3 86.4 86.4 86.5 86.6 86.6 86.7 86.8 86.8 86.9 87.0 87.0 87.1 87.2 87.2 87.3 87.4 87.4 87.5 87.6 87.7 87.7 87.8 87.9 87.9 88.0 88.1 88.1 88.2 88.3 88.3 88.4 88.5 88.5 88.6 88.7 88.7 88.8 88.9 88.9 89.0 89.1 89.1 89.2 89.3 89.3 89.4 89.5 89.5 89.6 89.7 89.7 89.8 89.9 89.9 90.0 90.1 90.1 90.2 90.3 90.4 90.4 90.5 90.6 90.6 90.7 90.8 90.8 90.9 91.0 91.0 91.1 91.2 91.2 91.3 91.4 91.4 91.5 91.6 91.6 91.7 91.8 91.8 91.9 92.0 92.0 92.1 92.2 92.2 92.3 92.4 92.4 92.5 92.6 92.6 92.7 92.8 92.8 92.9 93.0 93.0 93.1 93.2 93.3 93.3 93.4 93.5 93.5 93.6 93.7 93.7 93.8 93.9 93.9 94.0 94.1 94.1 94.2 94.3 94.3 94.4 94.5 94.5 94.6 94.7 94.7 94.8 94.9 94.9 95.0 95.1 95.1 95.2 95.3 95.3 95.4 95.5 95.5 95.6 95.7 95.7 95.8 95.9 96.0 96.0 96.1 96.2 96.2 96.3 96.4 96.4 96.5 96.6 96.6 96.7 96.8 96.8 96.9 97.0 97.0 97.1 97.2 97.2 97.3 97.4 97.4 97.5 97.6 97.6 97.7 97.8 97.8 97.9 98.0 98.0 98.1 98.2 98.2 98.3 98.4 98.4 98.5 98.6 98.7 98.7 98.8 98.9 98.9 99.0 99.1 99.1 99.2 99.3 99.3 99.4 99.5 99.5 99.6 99.7 99.7 99.8 99.9 99.9 -found 83 predictions from path traversal Error with prediction: snap lend_intergenic: 22019, rend_intergenic: 18332 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 44274, rend_intergenic: 44187 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 53827, rend_intergenic: 44294 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 69073, rend_intergenic: 58480 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 72502, rend_intergenic: 70405 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 85629, rend_intergenic: 74044 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 92106, rend_intergenic: 85670 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 95698, rend_intergenic: 92217 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 105132, rend_intergenic: 100130 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 127752, rend_intergenic: 113359 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 146771, rend_intergenic: 135478 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 149763, rend_intergenic: 146773 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 159838, rend_intergenic: 150558 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 166688, rend_intergenic: 160246 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 172839, rend_intergenic: 167574 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 194357, rend_intergenic: 186121 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 210234, rend_intergenic: 206409 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 224246, rend_intergenic: 220744 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 234800, rend_intergenic: 224677 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 235746, rend_intergenic: 235121 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 240235, rend_intergenic: 236223 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 247289, rend_intergenic: 240449 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 274938, rend_intergenic: 269994 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 280356, rend_intergenic: 276433 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 286073, rend_intergenic: 281177 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 288046, rend_intergenic: 287438 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 296097, rend_intergenic: 292231 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 313718, rend_intergenic: 298733 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 322870, rend_intergenic: 317697 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. Error with prediction: snap lend_intergenic: 331049, rend_intergenic: 328483 at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218. -reporting highest scoring path thru the trellis. -found 31 predictions persist after filtering for low support