-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3/scaffold_3_6850675-7088374

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.11371_t
Valid prediction for GlimmerHMM_glimmerT_6882-T1
Valid prediction for GeneMark_model.11418_t
Valid prediction for GeneMark_model.11392_t
Valid prediction for snap_scaffold_3-snap.1412-T1
Valid prediction for snap_scaffold_3-snap.1415-T1
Valid prediction for GeneMark_model.11375_t
Valid prediction for snap_scaffold_3-snap.1408-T1
Valid prediction for GeneMark_model.11368_t
Valid prediction for snap_scaffold_3-snap.1422-T1
Valid prediction for snap_scaffold_3-snap.1413-T1
Valid prediction for GeneMark_model.11424_t
Valid prediction for snap_scaffold_3-snap.1426-T1
Valid prediction for GeneMark_model.11391_t
Valid prediction for GlimmerHMM_glimmerT_6881-T1
Valid prediction for snap_scaffold_3-snap.1420-T1
Valid prediction for GeneMark_model.11378_t
Valid prediction for GeneMark_model.11420_t
Valid prediction for Augustus_model.g4502.t1
Valid prediction for GeneMark_model.11398_t
Valid prediction for GeneMark_model.11374_t
Valid prediction for Augustus_model.g4498.t1
Valid prediction for GeneMark_model.11414_t
Valid prediction for snap_scaffold_3-snap.1441-T1
Valid prediction for GlimmerHMM_glimmerT_6899-T1
Valid prediction for Augustus_model.g4519.t1
Valid prediction for GlimmerHMM_glimmerT_6893-T1
Valid prediction for GlimmerHMM_glimmerT_6870-T1
Valid prediction for GeneMark_model.11413_t
Valid prediction for GeneMark_model.11407_t
Valid prediction for GeneMark_model.11364_t
Valid prediction for GlimmerHMM_glimmerT_6895-T1
Valid prediction for snap_scaffold_3-snap.1439-T1
Valid prediction for Augustus_model.g4518.t1
Valid prediction for GeneMark_model.11384_t
Valid prediction for GeneMark_model.11416_t
Valid prediction for snap_scaffold_3-snap.1407-T1
Valid prediction for snap_scaffold_3-snap.1410-T1
Valid prediction for GlimmerHMM_glimmerT_6869-T1
Valid prediction for snap_scaffold_3-snap.1409-T1
Valid prediction for snap_scaffold_3-snap.1443-T1
Valid prediction for snap_scaffold_3-snap.1397-T1
Valid prediction for GeneMark_model.11377_t
Valid prediction for GlimmerHMM_glimmerT_6900-T1
Valid prediction for GlimmerHMM_glimmerT_6898-T1
Valid prediction for snap_scaffold_3-snap.1445-T1
Valid prediction for GlimmerHMM_glimmerT_6873-T1
Couldn't classify 92548, 93120
Sorry, prediction pasa_asmbl_40105.p1 fails validation.
(TCC)	 AT	92548-93120	CG	AAC
Valid prediction for Augustus_model.g4520.t1
Valid prediction for GlimmerHMM_glimmerT_6876-T1
Valid prediction for snap_scaffold_3-snap.1406-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for GeneMark_model.11411_t
Valid prediction for GlimmerHMM_glimmerT_6897-T1
Valid prediction for snap_scaffold_3-snap.1417-T1
Valid prediction for GeneMark_model.11382_t
Valid prediction for snap_scaffold_3-snap.1434-T1
Valid prediction for snap_scaffold_3-snap.1435-T1
Valid prediction for GeneMark_model.11385_t
Valid prediction for GeneMark_model.11365_t
Valid prediction for GeneMark_model.11406_t
Valid prediction for Augustus_model.g4509.t1
Valid prediction for Augustus_model.g4499.t1
Valid prediction for snap_scaffold_3-snap.1402-T1
Valid prediction for GeneMark_model.11408_t
Valid prediction for snap_scaffold_3-snap.1395-T1
Valid prediction for GlimmerHMM_glimmerT_6883-T1
Valid prediction for snap_scaffold_3-snap.1432-T1
Valid prediction for GeneMark_model.11396_t
Valid prediction for GeneMark_model.11381_t
Valid prediction for GeneMark_model.11409_t
Valid prediction for GeneMark_model.11422_t
Valid prediction for GlimmerHMM_glimmerT_6879-T1
Couldn't classify 13390, 13419
Sorry, prediction pasa_asmbl_40102.p1 fails validation.
(GTT)	 AC	13390-13419	GT	AGG
(GTC)	 AG	13888-13988	GT	GGG
(GAG)	 AG	15233-15382	GT	AGG
(CAG)	 AG	17444-17568	GT	AGG
(GTG)	 AG	18789-18977	GT	AGG
(TCT)	 AG	19838-20008	GT	AGG
(TGG)	 AG	20417-20592	AG	GAA
-recovered pasa_asmbl_40102.p1, terminal, 20417, 20592
-recovered pasa_asmbl_40102.p1, internal, 13888, 13988
-recovered pasa_asmbl_40102.p1, internal, 15233, 15382
-recovered pasa_asmbl_40102.p1, internal, 17444, 17568
-recovered pasa_asmbl_40102.p1, internal, 18789, 18977
-recovered pasa_asmbl_40102.p1, internal, 19838, 20008
Valid prediction for GeneMark_model.11405_t
Valid prediction for Augustus_model.g4507.t1
Valid prediction for GlimmerHMM_glimmerT_6892-T1
Valid prediction for snap_scaffold_3-snap.1418-T1
Valid prediction for GeneMark_model.11402_t
Valid prediction for Augustus_model.g4517.t1
Valid prediction for GeneMark_model.11401_t
Valid prediction for snap_scaffold_3-snap.1404-T1
Valid prediction for Augustus_model.g4522.t1
Couldn't classify 92050, 92144
Sorry, prediction pasa_asmbl_40794.p1 fails validation.
(ATG)	 AT	91361-91940	GT	AGG
(AAG)	 AG	92050-92144	CC	CCC
-recovered pasa_asmbl_40794.p1, initial, 91361, 91940

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_3-snap.1428-T1
Valid prediction for GeneMark_model.11372_t
Valid prediction for GeneMark_model.11399_t
Valid prediction for GeneMark_model.11423_t
Valid prediction for GeneMark_model.11395_t
Couldn't classify 198861, 200282
Sorry, prediction pasa_asmbl_38901.p1 fails validation.
(TTC)	 GC	198861-200282	TG	AGT
Valid prediction for GeneMark_model.11410_t
Valid prediction for Augustus_model.g4513.t1
Valid prediction for GlimmerHMM_glimmerT_6894-T1
Valid prediction for snap_scaffold_3-snap.1442-T1
Valid prediction for Augustus_model.g4501.t1
Valid prediction for GeneMark_model.11419_t
Valid prediction for GeneMark_model.11366_t
Valid prediction for GlimmerHMM_glimmerT_6890-T1
Valid prediction for snap_scaffold_3-snap.1438-T1
Valid prediction for GeneMark_model.11393_t
Valid prediction for GeneMark_model.11387_t
Valid prediction for GeneMark_model.11415_t
Valid prediction for HiQ_model.g4512.t1
Valid prediction for snap_scaffold_3-snap.1437-T1
Valid prediction for GeneMark_model.11403_t
Valid prediction for snap_scaffold_3-snap.1425-T1
Valid prediction for snap_scaffold_3-snap.1405-T1
Valid prediction for snap_scaffold_3-snap.1396-T1
Valid prediction for Augustus_model.g4521.t1
Valid prediction for snap_scaffold_3-snap.1400-T1
Valid prediction for GeneMark_model.11369_t
Valid prediction for GlimmerHMM_glimmerT_6885-T1
Valid prediction for GeneMark_model.11376_t
Valid prediction for GlimmerHMM_glimmerT_6896-T1
Valid prediction for snap_scaffold_3-snap.1414-T1
Valid prediction for GeneMark_model.11404_t
Valid prediction for snap_scaffold_3-snap.1399-T1
Valid prediction for GlimmerHMM_glimmerT_6880-T1
Valid prediction for snap_scaffold_3-snap.1431-T1
Valid prediction for snap_scaffold_3-snap.1398-T1
Couldn't classify 197483, 197509
Sorry, prediction pasa_asmbl_39633.p1 fails validation.
(ATG)	 CC	188454-188477	GT	AGG
(GAG)	 AG	188721-188798	GT	AGG
(CTG)	 AG	190534-190693	GT	GGG
(AGC)	 AG	192458-192579	GT	AGG
(AAC)	 AG	193053-193118	GT	AGG
(GAG)	 AG	193282-193425	GT	AGG
(GCT)	 AG	195195-195305	GT	AGG
(CAT)	 AG	196561-196659	GT	AGG
(TAT)	 AG	196905-197025	GT	AGG
(AGT)	 AG	197141-197280	GT	AGG
(GGG)	 AG	197483-197509	GT	CGG
-recovered pasa_asmbl_39633.p1, initial, 188454, 188477
-recovered pasa_asmbl_39633.p1, internal, 188721, 188798
-recovered pasa_asmbl_39633.p1, internal, 190534, 190693
-recovered pasa_asmbl_39633.p1, internal, 192458, 192579
-recovered pasa_asmbl_39633.p1, internal, 193053, 193118
-recovered pasa_asmbl_39633.p1, internal, 193282, 193425
-recovered pasa_asmbl_39633.p1, internal, 195195, 195305
-recovered pasa_asmbl_39633.p1, internal, 196561, 196659
-recovered pasa_asmbl_39633.p1, internal, 196905, 197025
-recovered pasa_asmbl_39633.p1, internal, 197141, 197280
-recovered pasa_asmbl_39633.p1, internal, 197483, 197509
Valid prediction for snap_scaffold_3-snap.1427-T1
Valid prediction for Augustus_model.g4505.t1
Valid prediction for snap_scaffold_3-snap.1430-T1
Valid prediction for GlimmerHMM_glimmerT_6886-T1
Valid prediction for Augustus_model.g4506.t1
Couldn't classify 142982, 143863
Sorry, prediction pasa_asmbl_40106.p1 fails validation.
(ATG)	 GT	142982-143863	GA	TCG
Valid prediction for snap_scaffold_3-snap.1411-T1
Valid prediction for snap_scaffold_3-snap.1433-T1
Valid prediction for snap_scaffold_3-snap.1419-T1
Valid prediction for snap_scaffold_3-snap.1423-T1
Valid prediction for GeneMark_model.11388_t
Valid prediction for Augustus_model.g4500.t1
Valid prediction for GeneMark_model.11421_t
Valid prediction for snap_scaffold_3-snap.1416-T1
Valid prediction for snap_scaffold_3-snap.1424-T1
Valid prediction for GeneMark_model.11383_t
Couldn't classify 122660, 122705
Sorry, prediction pasa_asmbl_38903.p1 fails validation.
(GAG)	 GT	122660-122705	GT	AGG
(GCG)	 AG	123655-123782	GT	CTG
(ATC)	 AG	123865-124021	GT	TGG
(ACA)	 AG	125664-125963	GT	GGG
(AGA)	 AG	126236-126268	GT	TGG
(ACG)	 AG	126382-126472	GT	ACG
(AGG)	 AG	126611-126814	GT	ATG
(GAT)	 AG	126955-127172	GT	AGG
(AAA)	 AG	127283-127406	GT	TTG
(GGT)	 AG	127544-127696	GT	AAG
(GGC)	 AG	127919-128042	GT	AGG
(AAA)	 AG	128136-128226	GT	AGG
(AAG)	 AG	128345-128473	GT	AGG
(GTT)	 AG	128647-128891	GT	GAG
add_exon() Sorry, pasa_asmbl_38903.p1 126955-127172-terminal-2 is invalid.
-recovered pasa_asmbl_38903.p1, terminal, 126955, 127172
-recovered pasa_asmbl_38903.p1, terminal, 128647, 128891
-recovered pasa_asmbl_38903.p1, internal, 123655, 123782
-recovered pasa_asmbl_38903.p1, internal, 123865, 124021
-recovered pasa_asmbl_38903.p1, internal, 125664, 125963
-recovered pasa_asmbl_38903.p1, internal, 126236, 126268
-recovered pasa_asmbl_38903.p1, internal, 126382, 126472
-recovered pasa_asmbl_38903.p1, internal, 126611, 126814
-recovered pasa_asmbl_38903.p1, internal, 126955, 127172
-recovered pasa_asmbl_38903.p1, internal, 127283, 127406
-recovered pasa_asmbl_38903.p1, internal, 127544, 127696
-recovered pasa_asmbl_38903.p1, internal, 127919, 128042
-recovered pasa_asmbl_38903.p1, internal, 128136, 128226
-recovered pasa_asmbl_38903.p1, internal, 128345, 128473
-recovered pasa_asmbl_38903.p1, internal, 128647, 128891
Valid prediction for Augustus_model.g4515.t1
Valid prediction for GeneMark_model.11370_t
Couldn't classify 115618, 116458
Couldn't classify 118232, 118305
Sorry, prediction pasa_asmbl_38904.p1 fails validation.
(GGA)	 GA	115618-116458	GT	CGG
(ACG)	 AG	117615-117731	GT	CGG
(ATC)	 AG	118232-118305	TT	AGT
-recovered pasa_asmbl_38904.p1, internal, 117615, 117731
Valid prediction for GeneMark_model.11379_t
Valid prediction for GlimmerHMM_glimmerT_6875-T1
Valid prediction for GeneMark_model.11389_t
Valid prediction for Augustus_model.g4508.t1
Valid prediction for snap_scaffold_3-snap.1429-T1
Valid prediction for GlimmerHMM_glimmerT_6874-T1
Valid prediction for snap_scaffold_3-snap.1421-T1
Valid prediction for GlimmerHMM_glimmerT_6891-T1
Valid prediction for GeneMark_model.11394_t
Valid prediction for Augustus_model.g4503.t1
Valid prediction for snap_scaffold_3-snap.1436-T1
Valid prediction for GlimmerHMM_glimmerT_6887-T1
Valid prediction for GlimmerHMM_glimmerT_6872-T1
Valid prediction for GeneMark_model.11397_t
Valid prediction for GlimmerHMM_glimmerT_6878-T1
Valid prediction for snap_scaffold_3-snap.1444-T1
Valid prediction for GeneMark_model.11380_t
Valid prediction for GeneMark_model.11373_t
Valid prediction for snap_scaffold_3-snap.1401-T1
Valid prediction for GlimmerHMM_glimmerT_6888-T1
Valid prediction for GlimmerHMM_glimmerT_6884-T1
Valid prediction for GeneMark_model.11417_t
Valid prediction for snap_scaffold_3-snap.1440-T1
Valid prediction for GeneMark_model.11386_t
Valid prediction for Augustus_model.g4514.t1
Valid prediction for GlimmerHMM_glimmerT_6871-T1
Valid prediction for snap_scaffold_3-snap.1403-T1
Valid prediction for GeneMark_model.11390_t
Valid prediction for GeneMark_model.11412_t
Valid prediction for GlimmerHMM_glimmerT_6877-T1
Valid prediction for Augustus_model.g4510.t1
Valid prediction for GeneMark_model.11400_t
Valid prediction for GeneMark_model.11367_t
Valid prediction for HiQ_model.g4504.t1
Valid prediction for Augustus_model.g4516.t1
Valid prediction for GlimmerHMM_glimmerT_6889-T1
Valid prediction for Augustus_model.g4511.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: GlimmerHMM lend_intergenic: 51349, rend_intergenic: 51346  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20592, rend_intergenic: 11910  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39852, rend_intergenic: 39363  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47146, rend_intergenic: 40165  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76234, rend_intergenic: 47345  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77804, rend_intergenic: 76616  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106622, rend_intergenic: 100638  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137920, rend_intergenic: 116695  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148946, rend_intergenic: 147044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164787, rend_intergenic: 153431  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167586, rend_intergenic: 165949  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191689, rend_intergenic: 170577  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 202685, rend_intergenic: 197738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207906, rend_intergenic: 203408  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 214679, rend_intergenic: 212981  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220323, rend_intergenic: 214915  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228101, rend_intergenic: 221551  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233826, rend_intergenic: 230032  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 237700
-exon list size: 845


building trellis

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42.6    
42.7    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.6    
43.7    
43.8    
43.9    
44.0    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.9    
45.0    
45.1    
45.2    
45.3    
45.5    
45.6    
45.7    
45.8    
45.9    
46.0    
46.2    
46.3    
46.4    
46.5    
46.6    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.5    
47.6    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.8    
48.9    
49.0    
49.1    
49.2    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.8    
50.9    
51.0    
51.1    
51.2    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.4    
53.5    
53.6    
53.7    
53.8    
54.0    
54.1    
54.2    
54.3    
54.4    
54.5    
54.7    
54.8    
54.9    
55.0    
55.1    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
56.0    
56.1    
56.2    
56.3    
56.4    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.7    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.3    
59.4    
59.5    
59.6    
59.7    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.6    
60.7    
60.8    
60.9    
61.0    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.9    
62.0    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.5    
63.6    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.8    
64.9    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.5    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.1    
69.2    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.4    
70.5    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.0    
72.1    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
73.0    
73.1    
73.2    
73.3    
73.4    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.7    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.6    
75.7    
75.8    
75.9    
76.0    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.6    
77.7    
77.8    
77.9    
78.0    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.9    
79.0    
79.1    
79.2    
79.3    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.5    
81.6    
81.7    
81.8    
81.9    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.1    
84.2    
84.3    
84.4    
84.5    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.4    
85.5    
85.6    
85.7    
85.8    
86.0    
86.1    
86.2    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.4    
87.5    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.7    
88.8    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
90.0    
90.1    
90.2    
90.3    
90.4    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.3    
91.4    
91.5    
91.6    
91.7    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
92.9    
93.0    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.9    
94.0    
94.1    
94.2    
94.3    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.2    
97.3    
97.4    
97.5    
97.6    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.5    
98.6    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 37 predictions from path traversal
Error with prediction: GlimmerHMM lend_intergenic: 51349, rend_intergenic: 51346  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20592, rend_intergenic: 11910  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 39852, rend_intergenic: 39363  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 47146, rend_intergenic: 40165  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76234, rend_intergenic: 47345  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77804, rend_intergenic: 76616  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106622, rend_intergenic: 100638  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 137920, rend_intergenic: 116695  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 148946, rend_intergenic: 147044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 164787, rend_intergenic: 153431  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 167586, rend_intergenic: 165949  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191689, rend_intergenic: 170577  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 202685, rend_intergenic: 197738  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 207906, rend_intergenic: 203408  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 214679, rend_intergenic: 212981  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 220323, rend_intergenic: 214915  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 228101, rend_intergenic: 221551  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 233826, rend_intergenic: 230032  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 24 predictions persist after filtering for low support