-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3/scaffold_3_4547871-4776295

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_3-snap.1005-T1
Valid prediction for snap_scaffold_3-snap.1025-T1
Valid prediction for GeneMark_model.10887_t
Couldn't classify 186052, 186256
Sorry, prediction pasa_asmbl_39992.p1 fails validation.
(TCG)	 TC	186052-186256	GT	AGG
(ATG)	 AG	187951-187998	GT	AGG
(TGG)	 AG	188358-188527	GT	CGG
(AGG)	 AG	189816-189965	TA	AAT
add_exon() Sorry, pasa_asmbl_39992.p1 187951-187998-initial-1 is invalid.
-recovered pasa_asmbl_39992.p1, initial, 187951, 187998
-recovered pasa_asmbl_39992.p1, terminal, 189816, 189965
-recovered pasa_asmbl_39992.p1, internal, 187951, 187998
-recovered pasa_asmbl_39992.p1, internal, 188358, 188527
Valid prediction for GeneMark_model.10885_t
Valid prediction for snap_scaffold_3-snap.983-T1
Valid prediction for snap_scaffold_3-snap.1017-T1
Couldn't classify 174973, 175383
Sorry, prediction pasa_asmbl_39990.p1 fails validation.
(GGC)	 GA	174973-175383	AG	ACA
Valid prediction for GeneMark_model.10873_t
Valid prediction for Augustus_model.g4302.t1
Valid prediction for snap_scaffold_3-snap.997-T1
Valid prediction for snap_scaffold_3-snap.1014-T1
Valid prediction for GeneMark_model.10868_t
Valid prediction for GeneMark_model.10913_t
Valid prediction for snap_scaffold_3-snap.1028-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_6559-T1
Valid prediction for GeneMark_model.10910_t
Valid prediction for GeneMark_model.10889_t
Valid prediction for snap_scaffold_3-snap.1027-T1
Valid prediction for snap_scaffold_3-snap.1022-T1
Valid prediction for GeneMark_model.10918_t
Valid prediction for snap_scaffold_3-snap.1020-T1
Valid prediction for GeneMark_model.10893_t
Couldn't classify 7823, 8317
Sorry, prediction pasa_asmbl_39976.p1 fails validation.
(CAA)	 CT	7823-8317	GT	AGG
(ATT)	 AG	8396-8565	GT	AGG
(GAA)	 AG	8678-8791	GT	AGG
(ACA)	 AG	9163-9304	AG	GAA
add_exon() Sorry, pasa_asmbl_39976.p1 8678-8791-terminal-1 is invalid.
-recovered pasa_asmbl_39976.p1, terminal, 8678, 8791
-recovered pasa_asmbl_39976.p1, terminal, 9163, 9304
-recovered pasa_asmbl_39976.p1, internal, 8396, 8565
-recovered pasa_asmbl_39976.p1, internal, 8678, 8791
Valid prediction for GlimmerHMM_glimmerT_6576-T1
Valid prediction for Augustus_model.g4288.t1
Valid prediction for snap_scaffold_3-snap.993-T1
Valid prediction for GlimmerHMM_glimmerT_6563-T1
Valid prediction for GlimmerHMM_glimmerT_6593-T1
Valid prediction for GeneMark_model.10878_t
Valid prediction for CodingQuarry_transcript_46027-T1
Valid prediction for HiQ_model.g4290.t1
Valid prediction for CodingQuarry_transcript_46028-T1
Valid prediction for GeneMark_model.10908_t
Valid prediction for Augustus_model.g4298.t1
Valid prediction for snap_scaffold_3-snap.1031-T1
Valid prediction for Augustus_model.g4293.t1
Valid prediction for GeneMark_model.10911_t
Valid prediction for GeneMark_model.10870_t
Valid prediction for Augustus_model.g4297.t1
Valid prediction for GeneMark_model.10894_t
Valid prediction for snap_scaffold_3-snap.1010-T1
Valid prediction for Augustus_model.g4299.t1
Valid prediction for snap_scaffold_3-snap.1013-T1
Couldn't classify 136847, 137020
Sorry, prediction pasa_asmbl_39988.p2 fails validation.
(ATG)	 GG	136479-136634	GT	GGG
(GAC)	 AG	136847-137020	GG	CTG
-recovered pasa_asmbl_39988.p2, initial, 136479, 136634
Valid prediction for pasa_asmbl_39984.p1
Valid prediction for Augustus_model.g4301.t1
Valid prediction for GeneMark_model.10876_t
Valid prediction for snap_scaffold_3-snap.989-T1
Valid prediction for GeneMark_model.10899_t
Valid prediction for GlimmerHMM_glimmerT_6588-T1
Valid prediction for GeneMark_model.10907_t
Valid prediction for snap_scaffold_3-snap.987-T1
Valid prediction for GlimmerHMM_glimmerT_6560-T1
Valid prediction for GeneMark_model.10903_t
Valid prediction for GlimmerHMM_glimmerT_6585-T1
Valid prediction for GlimmerHMM_glimmerT_6568-T1
Valid prediction for GeneMark_model.10879_t
Valid prediction for snap_scaffold_3-snap.990-T1
Valid prediction for GeneMark_model.10864_t
Valid prediction for HiQ_model.g4281.t1
Valid prediction for GlimmerHMM_glimmerT_6597-T1
Valid prediction for GlimmerHMM_glimmerT_6562-T1
Valid prediction for GeneMark_model.10853_t
Valid prediction for GeneMark_model.10905_t
Valid prediction for GeneMark_model.10851_t
Valid prediction for Augustus_model.g4280.t1
Valid prediction for snap_scaffold_3-snap.977-T1
Valid prediction for GeneMark_model.10901_t
Valid prediction for snap_scaffold_3-snap.1011-T1
Valid prediction for GeneMark_model.10855_t
Valid prediction for snap_scaffold_3-snap.1004-T1
Valid prediction for GlimmerHMM_glimmerT_6572-T1
Valid prediction for Augustus_model.g4294.t1
Valid prediction for GeneMark_model.10916_t
Valid prediction for snap_scaffold_3-snap.975-T1
Valid prediction for snap_scaffold_3-snap.978-T1
Valid prediction for snap_scaffold_3-snap.1006-T1
Valid prediction for GlimmerHMM_glimmerT_6598-T1
Valid prediction for snap_scaffold_3-snap.1030-T1
Valid prediction for snap_scaffold_3-snap.1016-T1
Valid prediction for GeneMark_model.10890_t
Valid prediction for GeneMark_model.10883_t
Valid prediction for GeneMark_model.10866_t
Valid prediction for GeneMark_model.10881_t
Valid prediction for GlimmerHMM_glimmerT_6571-T1
Valid prediction for Augustus_model.g4291.t1
Valid prediction for GeneMark_model.10858_t
Valid prediction for snap_scaffold_3-snap.985-T1
Valid prediction for Augustus_model.g4282.t1
Valid prediction for GlimmerHMM_glimmerT_6558-T1
Valid prediction for GeneMark_model.10875_t
Valid prediction for snap_scaffold_3-snap.1026-T1
Valid prediction for snap_scaffold_3-snap.998-T1
Valid prediction for GlimmerHMM_glimmerT_6586-T1
Valid prediction for snap_scaffold_3-snap.994-T1
Valid prediction for GlimmerHMM_glimmerT_6592-T1
Valid prediction for GeneMark_model.10888_t
Valid prediction for GlimmerHMM_glimmerT_6578-T1
Valid prediction for GlimmerHMM_glimmerT_6574-T1
Valid prediction for CodingQuarry_transcript_46029-T1
Valid prediction for GeneMark_model.10912_t
Valid prediction for GlimmerHMM_glimmerT_6569-T1
Couldn't classify 137516, 137602
Sorry, prediction pasa_asmbl_39989.p1 fails validation.
(AGA)	 TA	137516-137602	GT	AGG
(CCA)	 AG	137787-137973	GT	CGG
(GTC)	 AG	138324-138475	TT	GAT
-recovered pasa_asmbl_39989.p1, terminal, 138324, 138475
-recovered pasa_asmbl_39989.p1, internal, 137787, 137973
Valid prediction for snap_scaffold_3-snap.1009-T1
Valid prediction for snap_scaffold_3-snap.992-T1
Valid prediction for snap_scaffold_3-snap.996-T1
Valid prediction for HiQ_model.g4284.t1
Valid prediction for snap_scaffold_3-snap.1002-T1
Valid prediction for GlimmerHMM_glimmerT_6573-T1
Valid prediction for GlimmerHMM_glimmerT_6582-T1
Valid prediction for snap_scaffold_3-snap.1000-T1
Valid prediction for GeneMark_model.10862_t
Valid prediction for GlimmerHMM_glimmerT_6581-T1
Valid prediction for GeneMark_model.10896_t
Couldn't classify 26957, 27034
Couldn't classify 32511, 32585
Sorry, prediction pasa_asmbl_39977.p1 fails validation.
(GAG)	 CA	26957-27034	GT	AGG
(ACG)	 AG	27187-27233	GT	GAG
(GTT)	 AG	27424-27537	GT	AAG
(ATG)	 AG	29085-29160	GT	AGG
(CTG)	 AG	30436-30550	GT	AGG
(GTA)	 AG	31612-31742	GT	CGG
(AAA)	 AG	32140-32247	GT	CGG
(GAT)	 AG	32511-32585	GT	AGG
add_exon() Sorry, pasa_asmbl_39977.p1 29085-29160-initial-1 is invalid.
-recovered pasa_asmbl_39977.p1, initial, 29085, 29160
add_exon() Sorry, pasa_asmbl_39977.p1 30436-30550-terminal-3 is invalid.
-recovered pasa_asmbl_39977.p1, terminal, 30436, 30550
-recovered pasa_asmbl_39977.p1, internal, 27187, 27233
-recovered pasa_asmbl_39977.p1, internal, 27424, 27537
-recovered pasa_asmbl_39977.p1, internal, 29085, 29160
-recovered pasa_asmbl_39977.p1, internal, 30436, 30550
-recovered pasa_asmbl_39977.p1, internal, 31612, 31742
-recovered pasa_asmbl_39977.p1, internal, 32140, 32247
-recovered pasa_asmbl_39977.p1, internal, 32511, 32585
Valid prediction for snap_scaffold_3-snap.1018-T1
Valid prediction for GlimmerHMM_glimmerT_6590-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.10857_t
Couldn't classify 87883, 88164
Sorry, prediction pasa_asmbl_38770.p2 fails validation.
(GGG)	 GC	87883-88164	GT	CGG
(GGT)	 AG	88312-88368	CC	GAC
-recovered pasa_asmbl_38770.p2, terminal, 88312, 88368
Couldn't classify 33701, 33763
Couldn't classify 36167, 36283
Sorry, prediction pasa_asmbl_39656.p1 fails validation.
(AGT)	 CC	33701-33763	GT	TTG
(GGG)	 AG	34013-34070	GT	GGG
(TGA)	 AG	35207-35310	GT	TGG
(GTT)	 AG	36167-36283	GC	GGG
-recovered pasa_asmbl_39656.p1, internal, 34013, 34070
-recovered pasa_asmbl_39656.p1, internal, 35207, 35310
-recovered pasa_asmbl_39656.p1, internal, 36167, 36283
Valid prediction for GlimmerHMM_glimmerT_6561-T1
Valid prediction for GeneMark_model.10880_t
Couldn't classify 36386, 36739
Sorry, prediction pasa_asmbl_39742.p1 fails validation.
(AGA)	 GG	36386-36739	GG	AGG
Valid prediction for GlimmerHMM_glimmerT_6564-T1
Valid prediction for snap_scaffold_3-snap.976-T1
Valid prediction for Augustus_model.g4292.t1
Valid prediction for GeneMark_model.10900_t
Valid prediction for Augustus_model.g4303.t1
Valid prediction for GeneMark_model.10898_t
Valid prediction for Augustus_model.g4300.t1
Valid prediction for GeneMark_model.10850_t
Valid prediction for GlimmerHMM_glimmerT_6583-T1
Valid prediction for GeneMark_model.10895_t
Valid prediction for GeneMark_model.10902_t
Valid prediction for snap_scaffold_3-snap.995-T1
Valid prediction for HiQ_model.g4289.t1
Valid prediction for Augustus_model.g4287.t1
Valid prediction for Augustus_model.g4304.t1
Valid prediction for GlimmerHMM_glimmerT_6570-T1
Valid prediction for Augustus_model.g4283.t1
Valid prediction for GeneMark_model.10859_t
Valid prediction for GeneMark_model.10904_t
Valid prediction for snap_scaffold_3-snap.1021-T1
Valid prediction for GeneMark_model.10872_t
Valid prediction for snap_scaffold_3-snap.1003-T1
Valid prediction for snap_scaffold_3-snap.1032-T1
Valid prediction for snap_scaffold_3-snap.1007-T1
Valid prediction for GeneMark_model.10906_t
Valid prediction for snap_scaffold_3-snap.1023-T1
Valid prediction for GlimmerHMM_glimmerT_6579-T1
Valid prediction for GlimmerHMM_glimmerT_6591-T1
Valid prediction for GeneMark_model.10915_t
Couldn't classify 9454, 9512
Couldn't classify 12181, 12366
Sorry, prediction pasa_asmbl_39630.p1 fails validation.
(CAT)	 TG	9454-9512	GT	AGG
(TTT)	 AG	11580-11640	GT	TGG
(ATC)	 AG	12181-12366	CA	AGC
-recovered pasa_asmbl_39630.p1, internal, 11580, 11640
Couldn't classify 36410, 36709
Sorry, prediction CodingQuarry_transcript_46032-T1 fails validation.
(ATG)	 CC	36410-36709	AG	AGA
(GGC)	 AG	36740-37057	TG	AGT
-recovered CodingQuarry_transcript_46032-T1, terminal, 36740, 37057
Valid prediction for GeneMark_model.10914_t
Valid prediction for GeneMark_model.10884_t
Valid prediction for GeneMark_model.10877_t
Valid prediction for GeneMark_model.10909_t
Valid prediction for GeneMark_model.10849_t
Valid prediction for GeneMark_model.10852_t
Valid prediction for GeneMark_model.10860_t
Valid prediction for GeneMark_model.10856_t
Valid prediction for GlimmerHMM_glimmerT_6595-T1
Valid prediction for GeneMark_model.10874_t
Valid prediction for snap_scaffold_3-snap.991-T1
Valid prediction for GeneMark_model.10865_t
Valid prediction for GlimmerHMM_glimmerT_6575-T1
Valid prediction for snap_scaffold_3-snap.1029-T1
Valid prediction for GlimmerHMM_glimmerT_6565-T1
Valid prediction for GlimmerHMM_glimmerT_6589-T1
Valid prediction for snap_scaffold_3-snap.1019-T1
Valid prediction for Augustus_model.g4296.t1
Valid prediction for GlimmerHMM_glimmerT_6584-T1
Valid prediction for GeneMark_model.10886_t
Valid prediction for GeneMark_model.10861_t
Valid prediction for snap_scaffold_3-snap.980-T1
Valid prediction for GeneMark_model.10869_t
Valid prediction for GlimmerHMM_glimmerT_6567-T1
Valid prediction for GlimmerHMM_glimmerT_6594-T1
Valid prediction for GlimmerHMM_glimmerT_6577-T1
Valid prediction for GeneMark_model.10892_t
Valid prediction for Augustus_model.g4305.t1
Valid prediction for snap_scaffold_3-snap.979-T1
Valid prediction for snap_scaffold_3-snap.1024-T1
Valid prediction for snap_scaffold_3-snap.982-T1
Valid prediction for snap_scaffold_3-snap.984-T1
Valid prediction for Augustus_model.g4286.t1
Valid prediction for HiQ_model.g4285.t1
Valid prediction for Augustus_model.g4306.t1
Valid prediction for snap_scaffold_3-snap.986-T1
Valid prediction for CodingQuarry_transcript_46031-T1
Valid prediction for snap_scaffold_3-snap.1008-T1
Valid prediction for snap_scaffold_3-snap.999-T1
Valid prediction for GeneMark_model.10854_t
Valid prediction for snap_scaffold_3-snap.988-T1
Valid prediction for snap_scaffold_3-snap.1001-T1
Valid prediction for GeneMark_model.10867_t
Valid prediction for GeneMark_model.10863_t
Valid prediction for GlimmerHMM_glimmerT_6596-T1
Valid prediction for Augustus_model.g4295.t1
Valid prediction for GeneMark_model.10897_t
Couldn't classify 147909, 148004
Couldn't classify 152337, 152521
Sorry, prediction pasa_asmbl_38768.p1 fails validation.
(TGC)	 AT	147909-148004	GT	TGG
(GAC)	 AG	149463-149550	GT	AGG
(GCT)	 AG	149741-149784	GT	TCG
(GGC)	 AG	151288-151417	GT	GGG
(GTC)	 AG	151714-151923	GT	CGG
(GTC)	 AG	152337-152521	TG	CCT
add_exon() Sorry, pasa_asmbl_38768.p1 149463-149550-terminal-3 is invalid.
-recovered pasa_asmbl_38768.p1, terminal, 149463, 149550
-recovered pasa_asmbl_38768.p1, internal, 149463, 149550
-recovered pasa_asmbl_38768.p1, internal, 149741, 149784
-recovered pasa_asmbl_38768.p1, internal, 151288, 151417
-recovered pasa_asmbl_38768.p1, internal, 151714, 151923
Valid prediction for GlimmerHMM_glimmerT_6580-T1
Valid prediction for snap_scaffold_3-snap.1012-T1
Valid prediction for snap_scaffold_3-snap.981-T1
Couldn't classify 184313, 184361
Sorry, prediction pasa_asmbl_38765.p1 fails validation.
(CGC)	 CA	184313-184361	GT	AGG
(GGT)	 AG	184993-185183	GT	AGG
(ATT)	 AG	185693-185872	GT	AGG
(ATC)	 AG	185965-186076	GT	ATG
(CTC)	 AG	186412-186548	GT	GGG
(GAG)	 AG	186872-187219	AG	GAA
-recovered pasa_asmbl_38765.p1, terminal, 186872, 187219
-recovered pasa_asmbl_38765.p1, internal, 184993, 185183
-recovered pasa_asmbl_38765.p1, internal, 185693, 185872
-recovered pasa_asmbl_38765.p1, internal, 185965, 186076
-recovered pasa_asmbl_38765.p1, internal, 186412, 186548
Valid prediction for GlimmerHMM_glimmerT_6566-T1
Valid prediction for snap_scaffold_3-snap.1015-T1
Valid prediction for GlimmerHMM_glimmerT_6587-T1
Valid prediction for GeneMark_model.10917_t
Valid prediction for GeneMark_model.10871_t

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 6439, rend_intergenic: 2863  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36991, rend_intergenic: 14286  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55309, rend_intergenic: 46855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 60344, rend_intergenic: 57360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73553, rend_intergenic: 67194  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77199, rend_intergenic: 75230  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79468, rend_intergenic: 77518  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84472, rend_intergenic: 80998  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108744, rend_intergenic: 102547  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123807, rend_intergenic: 117370  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128939, rend_intergenic: 127932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130551, rend_intergenic: 129829  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138345, rend_intergenic: 131362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144273, rend_intergenic: 144074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159094, rend_intergenic: 155730  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161966, rend_intergenic: 159095  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168708, rend_intergenic: 168002  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177030, rend_intergenic: 169162  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182825, rend_intergenic: 182352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184515, rend_intergenic: 183075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189965, rend_intergenic: 186524  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190545, rend_intergenic: 190369  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203388, rend_intergenic: 191023  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 212313, rend_intergenic: 207040  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216431, rend_intergenic: 215044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 224855, rend_intergenic: 216606  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 228425
-exon list size: 1089


building trellis

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14.0    
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14.7    
14.8    
14.8    
14.9    
15.0    
15.1    
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15.3    
15.4    
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15.6    
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15.8    
15.9    
15.9    
16.0    
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16.2    
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16.4    
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16.8    
16.9    
17.0    
17.0    
17.1    
17.2    
17.3    
17.4    
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17.6    
17.7    
17.8    
17.9    
18.0    
18.1    
18.1    
18.2    
18.3    
18.4    
18.5    
18.6    
18.7    
18.8    
18.9    
19.0    
19.1    
19.2    
19.2    
19.3    
19.4    
19.5    
19.6    
19.7    
19.8    
19.9    
20.0    
20.1    
20.2    
20.3    
20.3    
20.4    
20.5    
20.6    
20.7    
20.8    
20.9    
21.0    
21.1    
21.2    
21.3    
21.4    
21.4    
21.5    
21.6    
21.7    
21.8    
21.9    
22.0    
22.1    
22.2    
22.3    
22.4    
22.5    
22.5    
22.6    
22.7    
22.8    
22.9    
23.0    
23.1    
23.2    
23.3    
23.4    
23.5    
23.6    
23.6    
23.7    
23.8    
23.9    
24.0    
24.1    
24.2    
24.3    
24.4    
24.5    
24.6    
24.7    
24.7    
24.8    
24.9    
25.0    
25.1    
25.2    
25.3    
25.4    
25.5    
25.6    
25.7    
25.8    
25.8    
25.9    
26.0    
26.1    
26.2    
26.3    
26.4    
26.5    
26.6    
26.7    
26.8    
26.9    
26.9    
27.0    
27.1    
27.2    
27.3    
27.4    
27.5    
27.6    
27.7    
27.8    
27.9    
28.0    
28.0    
28.1    
28.2    
28.3    
28.4    
28.5    
28.6    
28.7    
28.8    
28.9    
29.0    
29.1    
29.1    
29.2    
29.3    
29.4    
29.5    
29.6    
29.7    
29.8    
29.9    
30.0    
30.1    
30.2    
30.2    
30.3    
30.4    
30.5    
30.6    
30.7    
30.8    
30.9    
31.0    
31.1    
31.2    
31.3    
31.3    
31.4    
31.5    
31.6    
31.7    
31.8    
31.9    
32.0    
32.1    
32.2    
32.3    
32.4    
32.4    
32.5    
32.6    
32.7    
32.8    
32.9    
33.0    
33.1    
33.2    
33.3    
33.4    
33.5    
33.5    
33.6    
33.7    
33.8    
33.9    
34.0    
34.1    
34.2    
34.3    
34.4    
34.5    
34.6    
34.6    
34.7    
34.8    
34.9    
35.0    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.7    
35.7    
35.8    
35.9    
36.0    
36.1    
36.2    
36.3    
36.4    
36.5    
36.6    
36.7    
36.8    
36.8    
36.9    
37.0    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.7    
37.8    
37.9    
37.9    
38.0    
38.1    
38.2    
38.3    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.0    
39.0    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.7    
39.8    
39.9    
40.0    
40.1    
40.1    
40.2    
40.3    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
41.0    
41.1    
41.2    
41.2    
41.3    
41.4    
41.5    
41.6    
41.7    
41.8    
41.9    
42.0    
42.1    
42.2    
42.3    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.0    
43.1    
43.2    
43.3    
43.4    
43.4    
43.5    
43.6    
43.7    
43.8    
43.9    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.5    
44.6    
44.7    
44.8    
44.9    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.6    
45.7    
45.8    
45.9    
46.0    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.7    
46.8    
46.9    
47.0    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.8    
47.9    
48.0    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
48.9    
49.0    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.0    
50.0    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.0    
51.1    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.0    
52.1    
52.2    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.0    
53.1    
53.2    
53.3    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.0    
54.1    
54.2    
54.3    
54.4    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.1    
55.2    
55.3    
55.4    
55.5    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.2    
56.3    
56.4    
56.5    
56.6    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.7    
57.8    
57.9    
58.0    
58.1    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.8    
58.9    
59.0    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
59.9    
60.0    
60.1    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.0    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.1    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.5    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.6    
68.7    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.2    
74.2    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.3    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
80.8    
80.9    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
81.9    
82.0    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.0    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.4    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.4    
88.5    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.4    
90.5    
90.6    
90.7    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
92.9    
93.0    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.0    
94.1    
94.2    
94.3    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.2    
96.3    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.3    
97.4    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.5    
99.5    
99.6    
99.7    
99.8    
99.9    
-found 47 predictions from path traversal
Error with prediction: snap lend_intergenic: 6439, rend_intergenic: 2863  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 36991, rend_intergenic: 14286  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 55309, rend_intergenic: 46855  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 60344, rend_intergenic: 57360  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 73553, rend_intergenic: 67194  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77199, rend_intergenic: 75230  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 79468, rend_intergenic: 77518  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 84472, rend_intergenic: 80998  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 108744, rend_intergenic: 102547  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123807, rend_intergenic: 117370  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128939, rend_intergenic: 127932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130551, rend_intergenic: 129829  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 138345, rend_intergenic: 131362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 144273, rend_intergenic: 144074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 159094, rend_intergenic: 155730  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 161966, rend_intergenic: 159095  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168708, rend_intergenic: 168002  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177030, rend_intergenic: 169162  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 182825, rend_intergenic: 182352  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184515, rend_intergenic: 183075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 189965, rend_intergenic: 186524  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190545, rend_intergenic: 190369  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 203388, rend_intergenic: 191023  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 212313, rend_intergenic: 207040  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 216431, rend_intergenic: 215044  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 224855, rend_intergenic: 216606  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 31 predictions persist after filtering for low support