-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3/scaffold_3_18053261-18253867

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_3-snap.3557-T1
Valid prediction for GeneMark_model.13799_t
Valid prediction for GeneMark_model.13776_t
Valid prediction for GeneMark_model.13775_t
Valid prediction for GeneMark_model.13800_t
Valid prediction for GeneMark_model.13804_t
Valid prediction for Augustus_model.g5624.t1
Valid prediction for GeneMark_model.13791_t
Valid prediction for snap_scaffold_3-snap.3573-T1
Valid prediction for snap_scaffold_3-snap.3547-T1
Valid prediction for GlimmerHMM_glimmerT_8504-T1
Valid prediction for CodingQuarry_transcript_46357-T1
Couldn't classify 74728, 74821
Couldn't classify 76142, 76217
Couldn't classify 78201, 78310
Sorry, prediction pasa_asmbl_40686.p1 fails validation.
(ATG)	 GC	65628-65639	GT	AGG
(GTA)	 AG	66144-66197	GT	AAG
(TAC)	 AG	69171-69313	GT	GGG
(ATT)	 AG	69607-69722	GT	TGG
(AGA)	 AG	71496-71635	GT	AGG
(GAG)	 AG	72997-73143	GT	CTG
(GCA)	 AG	73494-73632	GT	AGG
(AGG)	 AG	74080-74173	GT	GGG
(ACG)	 AG	74728-74821	AT	TGA
(GGA)	 AC	76142-76217	GT	AGG
(CGA)	 AG	78201-78310	TT	CCT
-recovered pasa_asmbl_40686.p1, initial, 65628, 65639
-recovered pasa_asmbl_40686.p1, internal, 66144, 66197
-recovered pasa_asmbl_40686.p1, internal, 69171, 69313
-recovered pasa_asmbl_40686.p1, internal, 69607, 69722
-recovered pasa_asmbl_40686.p1, internal, 71496, 71635
-recovered pasa_asmbl_40686.p1, internal, 72997, 73143
-recovered pasa_asmbl_40686.p1, internal, 73494, 73632
-recovered pasa_asmbl_40686.p1, internal, 74080, 74173
Valid prediction for GlimmerHMM_glimmerT_8480-T1
Valid prediction for GeneMark_model.13770_t
Valid prediction for snap_scaffold_3-snap.3545-T1
Valid prediction for GlimmerHMM_glimmerT_8479-T1
Valid prediction for GeneMark_model.13797_t
Valid prediction for snap_scaffold_3-snap.3559-T1
Valid prediction for GlimmerHMM_glimmerT_8487-T1
Valid prediction for GeneMark_model.13802_t
Valid prediction for GeneMark_model.13762_t
Valid prediction for GeneMark_model.13787_t
Valid prediction for Augustus_model.g5636.t1
Valid prediction for GlimmerHMM_glimmerT_8488-T1
Valid prediction for GeneMark_model.13779_t
Valid prediction for GlimmerHMM_glimmerT_8497-T1
Valid prediction for GeneMark_model.13781_t
Couldn't classify 81197, 81250
Sorry, prediction pasa_asmbl_40687.p1 fails validation.
(GGT)	 CA	81197-81250	GC	CGG
(ATG)	 AG	81431-81511	GT	CAG
(GCT)	 AG	83618-83758	GT	AGG
(GGG)	 AG	85307-85445	GT	AGG
(GTA)	 AG	85979-86137	GT	AGG
(CCC)	 AG	86428-86518	GT	CAG
(TCG)	 AG	86615-86825	AC	AGA
-recovered pasa_asmbl_40687.p1, initial, 81431, 81511
-recovered pasa_asmbl_40687.p1, terminal, 86615, 86825
-recovered pasa_asmbl_40687.p1, internal, 81431, 81511
-recovered pasa_asmbl_40687.p1, internal, 83618, 83758
-recovered pasa_asmbl_40687.p1, internal, 85307, 85445
-recovered pasa_asmbl_40687.p1, internal, 85979, 86137
-recovered pasa_asmbl_40687.p1, internal, 86428, 86518
Valid prediction for GeneMark_model.13773_t
Valid prediction for GeneMark_model.13763_t
Valid prediction for Augustus_model.g5630.t1
Valid prediction for snap_scaffold_3-snap.3576-T1
Valid prediction for GeneMark_model.13761_t
Valid prediction for GlimmerHMM_glimmerT_8498-T1
Valid prediction for GeneMark_model.13794_t
Valid prediction for GeneMark_model.13771_t
Valid prediction for GlimmerHMM_glimmerT_8481-T1
Valid prediction for GlimmerHMM_glimmerT_8491-T1
Valid prediction for GeneMark_model.13764_t
Couldn't classify 126060, 126182
Sorry, prediction pasa_asmbl_40691.p1 fails validation.
(GGC)	 CA	126060-126182	GT	AAG
(GGC)	 AG	126451-126522	GT	AGG
(GGC)	 AG	128200-128238	GT	CGG
(ACC)	 AG	128483-128558	GT	AGG
(GAA)	 AG	128646-128689	GT	ATG
(TTC)	 AG	129268-129363	GT	TGG
(ATC)	 AG	130071-130154	GT	AGG
(ACT)	 AG	130248-130340	GT	GGG
(GCC)	 AG	130563-130673	GT	AGG
(AGC)	 AG	130927-131063	GT	AAG
(GCA)	 AG	131225-131413	GT	CTG
(CTT)	 AG	131847-131913	GT	AGG
(GAG)	 AG	132354-132451	GT	CAG
(ATT)	 AG	133033-133114	GC	AGG
(GCC)	 AG	133208-133299	GT	AAG
(ACA)	 AG	133524-133613	GT	ACG
(GTT)	 AG	134482-134651	GT	AGG
(GCA)	 AG	135060-135195	GT	TGG
(GTA)	 AG	135732-135843	GT	AGG
(CCG)	 AG	135991-136098	GT	AGG
(AAC)	 AG	136242-136412	GG	GAG
-recovered pasa_asmbl_40691.p1, terminal, 136242, 136412
-recovered pasa_asmbl_40691.p1, internal, 126451, 126522
-recovered pasa_asmbl_40691.p1, internal, 128200, 128238
-recovered pasa_asmbl_40691.p1, internal, 128483, 128558
-recovered pasa_asmbl_40691.p1, internal, 128646, 128689
-recovered pasa_asmbl_40691.p1, internal, 129268, 129363
-recovered pasa_asmbl_40691.p1, internal, 130071, 130154
-recovered pasa_asmbl_40691.p1, internal, 130248, 130340
-recovered pasa_asmbl_40691.p1, internal, 130563, 130673
-recovered pasa_asmbl_40691.p1, internal, 130927, 131063
-recovered pasa_asmbl_40691.p1, internal, 131225, 131413
-recovered pasa_asmbl_40691.p1, internal, 131847, 131913
-recovered pasa_asmbl_40691.p1, internal, 132354, 132451
-recovered pasa_asmbl_40691.p1, internal, 133033, 133114
-recovered pasa_asmbl_40691.p1, internal, 133208, 133299
-recovered pasa_asmbl_40691.p1, internal, 133524, 133613
-recovered pasa_asmbl_40691.p1, internal, 134482, 134651
-recovered pasa_asmbl_40691.p1, internal, 135060, 135195
-recovered pasa_asmbl_40691.p1, internal, 135732, 135843
-recovered pasa_asmbl_40691.p1, internal, 135991, 136098
Valid prediction for snap_scaffold_3-snap.3584-T1
Valid prediction for GlimmerHMM_glimmerT_8475-T1
Valid prediction for Augustus_model.g5635.t1
Valid prediction for GeneMark_model.13788_t
Valid prediction for GeneMark_model.13806_t
Valid prediction for GlimmerHMM_glimmerT_8499-T1
Valid prediction for snap_scaffold_3-snap.3575-T1
Valid prediction for GlimmerHMM_glimmerT_8485-T1
Valid prediction for Augustus_model.g5627.t1
Valid prediction for snap_scaffold_3-snap.3564-T1
Valid prediction for snap_scaffold_3-snap.3555-T1
Valid prediction for GlimmerHMM_glimmerT_8496-T1
Valid prediction for snap_scaffold_3-snap.3560-T1
Valid prediction for GlimmerHMM_glimmerT_8502-T1
Valid prediction for snap_scaffold_3-snap.3542-T1
Valid prediction for GeneMark_model.13759_t
Valid prediction for GeneMark_model.13768_t
Valid prediction for GlimmerHMM_glimmerT_8473-T1
Valid prediction for GlimmerHMM_glimmerT_8490-T1
Valid prediction for snap_scaffold_3-snap.3568-T1
Valid prediction for snap_scaffold_3-snap.3570-T1
Valid prediction for GlimmerHMM_glimmerT_8506-T1
Valid prediction for snap_scaffold_3-snap.3582-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g5625.t1
Valid prediction for GeneMark_model.13801_t
Valid prediction for snap_scaffold_3-snap.3578-T1
Valid prediction for snap_scaffold_3-snap.3552-T1
Valid prediction for GlimmerHMM_glimmerT_8508-T1
Valid prediction for GeneMark_model.13793_t
Couldn't classify 57045, 57110
Couldn't classify 60412, 60441
Sorry, prediction pasa_asmbl_39549.p1 fails validation.
(GAC)	 GA	57045-57110	GT	GGG
(GTG)	 AG	57692-57772	GT	TGG
(GAC)	 AG	57952-58155	GT	TGG
(GAA)	 AG	58324-58410	GT	AAG
(AGT)	 AG	58598-58728	GT	AGG
(CCT)	 AG	60175-60307	GT	AGG
(GTG)	 AG	60412-60441	GC	CTG
-recovered pasa_asmbl_39549.p1, internal, 57692, 57772
-recovered pasa_asmbl_39549.p1, internal, 57952, 58155
-recovered pasa_asmbl_39549.p1, internal, 58324, 58410
-recovered pasa_asmbl_39549.p1, internal, 58598, 58728
-recovered pasa_asmbl_39549.p1, internal, 60175, 60307
-recovered pasa_asmbl_39549.p1, internal, 60412, 60441
Valid prediction for snap_scaffold_3-snap.3569-T1
Valid prediction for GeneMark_model.13792_t
Valid prediction for snap_scaffold_3-snap.3580-T1
Valid prediction for GeneMark_model.13803_t
Valid prediction for pasa_asmbl_39546.p1
Valid prediction for GlimmerHMM_glimmerT_8507-T1
Valid prediction for Augustus_model.g5631.t1
Valid prediction for snap_scaffold_3-snap.3577-T1
Valid prediction for Augustus_model.g5634.t1
Valid prediction for GeneMark_model.13766_t
Valid prediction for snap_scaffold_3-snap.3565-T1
Valid prediction for snap_scaffold_3-snap.3572-T1
Valid prediction for snap_scaffold_3-snap.3550-T1
Valid prediction for snap_scaffold_3-snap.3554-T1
Valid prediction for GlimmerHMM_glimmerT_8493-T1
Couldn't classify 142462, 142641
Sorry, prediction pasa_asmbl_39536.p1 fails validation.
(CCT)	 AG	142462-142641	GT	AGG
(ACA)	 AG	143966-144087	GT	GTG
(ATT)	 AG	144728-144832	GT	AGG
(CCA)	 AG	145338-145444	GT	AGG
(CGG)	 AG	147937-148088	GT	AGG
(AAG)	 AG	148699-148815	GT	AGG
(AAG)	 AG	150970-151137	TC	GAT
-recovered pasa_asmbl_39536.p1, terminal, 150970, 151137
-recovered pasa_asmbl_39536.p1, internal, 142462, 142641
-recovered pasa_asmbl_39536.p1, internal, 143966, 144087
-recovered pasa_asmbl_39536.p1, internal, 144728, 144832
-recovered pasa_asmbl_39536.p1, internal, 145338, 145444
-recovered pasa_asmbl_39536.p1, internal, 147937, 148088
-recovered pasa_asmbl_39536.p1, internal, 148699, 148815
Valid prediction for snap_scaffold_3-snap.3571-T1
Valid prediction for Augustus_model.g5638.t1
Valid prediction for GlimmerHMM_glimmerT_8477-T1
Valid prediction for GeneMark_model.13790_t
Valid prediction for GeneMark_model.13789_t
Valid prediction for GlimmerHMM_glimmerT_8494-T1
Valid prediction for GlimmerHMM_glimmerT_8492-T1
Valid prediction for GlimmerHMM_glimmerT_8486-T1
Valid prediction for snap_scaffold_3-snap.3556-T1
Valid prediction for GeneMark_model.13798_t
Valid prediction for snap_scaffold_3-snap.3543-T1
Valid prediction for GlimmerHMM_glimmerT_8495-T1
Valid prediction for Augustus_model.g5628.t1
Valid prediction for pasa_asmbl_39539.p1
Valid prediction for Augustus_model.g5642.t1
Valid prediction for snap_scaffold_3-snap.3549-T1
Valid prediction for GeneMark_model.13780_t
Valid prediction for GlimmerHMM_glimmerT_8500-T1
Valid prediction for GeneMark_model.13769_t
Valid prediction for snap_scaffold_3-snap.3548-T1
Valid prediction for GeneMark_model.13807_t
Valid prediction for snap_scaffold_3-snap.3551-T1
Valid prediction for GeneMark_model.13782_t
Valid prediction for snap_scaffold_3-snap.3563-T1
Valid prediction for snap_scaffold_3-snap.3553-T1
Valid prediction for snap_scaffold_3-snap.3586-T1
Valid prediction for GeneMark_model.13758_t
Valid prediction for snap_scaffold_3-snap.3566-T1
Valid prediction for Augustus_model.g5640.t1
Valid prediction for GeneMark_model.13795_t
Valid prediction for Augustus_model.g5637.t1
Valid prediction for GlimmerHMM_glimmerT_8503-T1
Valid prediction for GeneMark_model.13783_t
Valid prediction for snap_scaffold_3-snap.3574-T1
Valid prediction for GeneMark_model.13796_t
Couldn't classify 99780, 99885
Sorry, prediction pasa_asmbl_39544.p1 fails validation.
(ATG)	 TC	94982-95089	GC	AGG
(GCT)	 AG	95366-95477	GT	TGG
(CCC)	 AG	96927-97017	GT	AGG
(ACG)	 AG	99780-99885	TC	AGT
-recovered pasa_asmbl_39544.p1, initial, 94982, 95089
-recovered pasa_asmbl_39544.p1, internal, 95366, 95477
-recovered pasa_asmbl_39544.p1, internal, 96927, 97017
Valid prediction for GlimmerHMM_glimmerT_8476-T1
Valid prediction for GeneMark_model.13784_t
Valid prediction for GlimmerHMM_glimmerT_8484-T1
Valid prediction for snap_scaffold_3-snap.3562-T1
Valid prediction for snap_scaffold_3-snap.3544-T1
Valid prediction for Augustus_model.g5632.t1
Valid prediction for Augustus_model.g5629.t1
Valid prediction for snap_scaffold_3-snap.3567-T1
Valid prediction for GlimmerHMM_glimmerT_8489-T1
Valid prediction for snap_scaffold_3-snap.3585-T1
Valid prediction for Augustus_model.g5626.t1
Valid prediction for snap_scaffold_3-snap.3561-T1
Valid prediction for GeneMark_model.13786_t
Valid prediction for GeneMark_model.13767_t
Valid prediction for Augustus_model.g5639.t1
Valid prediction for snap_scaffold_3-snap.3583-T1
Valid prediction for snap_scaffold_3-snap.3558-T1
Valid prediction for GeneMark_model.13772_t
Valid prediction for GeneMark_model.13760_t
Valid prediction for GlimmerHMM_glimmerT_8478-T1
Valid prediction for CodingQuarry_transcript_46358-T1
Valid prediction for GeneMark_model.13785_t
Valid prediction for GlimmerHMM_glimmerT_8482-T1
Valid prediction for GeneMark_model.13778_t
Valid prediction for GlimmerHMM_glimmerT_8505-T1
Valid prediction for GlimmerHMM_glimmerT_8474-T1
Valid prediction for GeneMark_model.13777_t
Valid prediction for snap_scaffold_3-snap.3579-T1
Valid prediction for GeneMark_model.13765_t
Valid prediction for GlimmerHMM_glimmerT_8501-T1
Valid prediction for GlimmerHMM_glimmerT_8483-T1
Valid prediction for snap_scaffold_3-snap.3581-T1
Valid prediction for GeneMark_model.13774_t
Valid prediction for snap_scaffold_3-snap.3546-T1
Valid prediction for HiQ_model.g5633.t1
Valid prediction for GeneMark_model.13805_t
Valid prediction for Augustus_model.g5641.t1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 35449, rend_intergenic: 34308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41118, rend_intergenic: 39060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75429, rend_intergenic: 66402  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81298, rend_intergenic: 76267  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94737, rend_intergenic: 88173  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105626, rend_intergenic: 100297  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118908, rend_intergenic: 116171  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136642, rend_intergenic: 126050  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143691, rend_intergenic: 140658  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184975, rend_intergenic: 182455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191194, rend_intergenic: 190218  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195029, rend_intergenic: 192201  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 200607
-exon list size: 752


building trellis

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43.9    
44.0    
44.2    
44.3    
44.4    
44.6    
44.7    
44.8    
45.0    
45.1    
45.2    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.2    
46.3    
46.4    
46.6    
46.7    
46.8    
46.9    
47.1    
47.2    
47.3    
47.5    
47.6    
47.7    
47.9    
48.0    
48.1    
48.3    
48.4    
48.5    
48.7    
48.8    
48.9    
49.1    
49.2    
49.3    
49.5    
49.6    
49.7    
49.9    
50.0    
50.1    
50.3    
50.4    
50.5    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.1    
53.2    
53.3    
53.4    
53.6    
53.7    
53.8    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.8    
54.9    
55.0    
55.2    
55.3    
55.4    
55.6    
55.7    
55.8    
56.0    
56.1    
56.2    
56.4    
56.5    
56.6    
56.8    
56.9    
57.0    
57.2    
57.3    
57.4    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.7    
59.8    
59.9    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.9    
61.0    
61.1    
61.3    
61.4    
61.5    
61.7    
61.8    
61.9    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.3    
63.4    
63.5    
63.7    
63.8    
63.9    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.2    
66.3    
66.4    
66.6    
66.7    
66.8    
67.0    
67.1    
67.2    
67.4    
67.5    
67.6    
67.8    
67.9    
68.0    
68.2    
68.3    
68.4    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.2    
70.3    
70.4    
70.6    
70.7    
70.8    
71.0    
71.1    
71.2    
71.4    
71.5    
71.6    
71.8    
71.9    
72.0    
72.1    
72.3    
72.4    
72.5    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.3    
76.4    
76.5    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.2    
78.4    
78.5    
78.6    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.8    
80.9    
81.0    
81.2    
81.3    
81.4    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.8    
82.9    
83.0    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.7    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.7    
85.8    
85.9    
86.1    
86.2    
86.3    
86.5    
86.6    
86.7    
86.9    
87.0    
87.1    
87.3    
87.4    
87.5    
87.7    
87.8    
87.9    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.7    
89.8    
89.9    
90.1    
90.2    
90.3    
90.5    
90.6    
90.7    
90.8    
91.0    
91.1    
91.2    
91.4    
91.5    
91.6    
91.8    
91.9    
92.0    
92.2    
92.3    
92.4    
92.6    
92.7    
92.8    
93.0    
93.1    
93.2    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.2    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.9    
98.0    
98.1    
98.3    
98.4    
98.5    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.5    
99.6    
99.7    
99.9    
-found 33 predictions from path traversal
Error with prediction: snap lend_intergenic: 35449, rend_intergenic: 34308  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 41118, rend_intergenic: 39060  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 75429, rend_intergenic: 66402  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81298, rend_intergenic: 76267  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 94737, rend_intergenic: 88173  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105626, rend_intergenic: 100297  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118908, rend_intergenic: 116171  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 136642, rend_intergenic: 126050  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 143691, rend_intergenic: 140658  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184975, rend_intergenic: 182455  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191194, rend_intergenic: 190218  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 195029, rend_intergenic: 192201  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 22 predictions persist after filtering for low support