-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_3/scaffold_3_1148506-1343983

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_3-snap.310-T1
Couldn't classify 158847, 158975
Couldn't classify 164917, 164979
Sorry, prediction pasa_asmbl_39797.p1 fails validation.
(AGT)	 CC	158847-158975	GT	TGG
(GAC)	 AG	159742-159847	GT	AGG
(ACC)	 AG	161778-161914	GT	AGG
(ATC)	 AG	162414-162544	GT	AGG
(CAC)	 AG	163729-163816	GT	AGG
(CCA)	 AG	164917-164979	CT	GCC
-recovered pasa_asmbl_39797.p1, internal, 159742, 159847
-recovered pasa_asmbl_39797.p1, internal, 161778, 161914
-recovered pasa_asmbl_39797.p1, internal, 162414, 162544
-recovered pasa_asmbl_39797.p1, internal, 163729, 163816
Valid prediction for snap_scaffold_3-snap.315-T1
Valid prediction for GeneMark_model.10047_t
Valid prediction for GlimmerHMM_glimmerT_6132-T1
Valid prediction for GeneMark_model.10088_t
Valid prediction for GeneMark_model.10056_t
Valid prediction for snap_scaffold_3-snap.303-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.10063_t
Valid prediction for snap_scaffold_3-snap.302-T1
Valid prediction for GlimmerHMM_glimmerT_6124-T1
Valid prediction for Augustus_model.g4013.t1
Valid prediction for Augustus_model.g4015.t1
Valid prediction for GlimmerHMM_glimmerT_6127-T1
Couldn't classify 114711, 114884
Couldn't classify 115157, 115282
Sorry, prediction pasa_asmbl_40795.p1 fails validation.
(GTT)	 CT	114711-114884	GT	TGG
(GAG)	 AG	115157-115282	GT	TTG
-recovered pasa_asmbl_40795.p1, internal, 115157, 115282
Valid prediction for snap_scaffold_3-snap.293-T1
Valid prediction for GeneMark_model.10038_t
Valid prediction for GeneMark_model.10067_t
Valid prediction for GeneMark_model.10045_t
Valid prediction for CodingQuarry_transcript_45956-T1
Couldn't classify 29505, 29634
Couldn't classify 33744, 33831
Sorry, prediction pasa_asmbl_39790.p1 fails validation.
(CAG)	 CC	29505-29634	GT	AGG
(GTT)	 AG	32244-32401	GT	AGG
(GTA)	 AG	32693-32916	GT	AGG
(CTC)	 AG	33744-33831	GG	CAG
-recovered pasa_asmbl_39790.p1, internal, 32244, 32401
-recovered pasa_asmbl_39790.p1, internal, 32693, 32916
Valid prediction for Augustus_model.g4014.t1
Valid prediction for GlimmerHMM_glimmerT_6129-T1
Valid prediction for Augustus_model.g4016.t1
Valid prediction for snap_scaffold_3-snap.325-T1
Valid prediction for GeneMark_model.10083_t
Valid prediction for GlimmerHMM_glimmerT_6126-T1
Valid prediction for GeneMark_model.10042_t
Valid prediction for GeneMark_model.10055_t
Couldn't classify 180903, 181013
Sorry, prediction pasa_asmbl_40761.p1 fails validation.
(GTG)	 CA	180903-181013	GT	ATG
(AGC)	 AG	181313-181450	GT	TGG
(CCC)	 AG	181695-181802	CA	AAC
-recovered pasa_asmbl_40761.p1, terminal, 181695, 181802
-recovered pasa_asmbl_40761.p1, internal, 181313, 181450
Valid prediction for GlimmerHMM_glimmerT_6118-T1
Valid prediction for CodingQuarry_transcript_45958-T1
Valid prediction for GeneMark_model.10049_t
Valid prediction for Augustus_model.g4012.t1
Couldn't classify 109142, 109336
Sorry, prediction pasa_asmbl_39796.p1 fails validation.
(ATG)	 CC	108697-108879	GT	AGG
(GAG)	 AG	109142-109336	GT	TAG
-recovered pasa_asmbl_39796.p1, initial, 108697, 108879
-recovered pasa_asmbl_39796.p1, internal, 109142, 109336
Valid prediction for GlimmerHMM_glimmerT_6121-T1
Valid prediction for GlimmerHMM_glimmerT_6112-T1
Couldn't classify 103270, 103471
Couldn't classify 105425, 105618
Sorry, prediction pasa_asmbl_40816.p1 fails validation.
(AGA)	 GC	103270-103471	GT	AGG
(GAT)	 AG	104154-104281	GT	AGG
(GGC)	 AG	104836-104945	GT	CAG
(CTA)	 AG	105119-105309	GT	AGG
(GTC)	 AG	105425-105618	AA	CCA
-recovered pasa_asmbl_40816.p1, internal, 104154, 104281
-recovered pasa_asmbl_40816.p1, internal, 104836, 104945
-recovered pasa_asmbl_40816.p1, internal, 105119, 105309
Valid prediction for GeneMark_model.10040_t
Valid prediction for pasa_asmbl_40832.p1
Valid prediction for GeneMark_model.10077_t
Valid prediction for Augustus_model.g4028.t1
Valid prediction for snap_scaffold_3-snap.291-T1
Valid prediction for GlimmerHMM_glimmerT_6113-T1
Valid prediction for snap_scaffold_3-snap.283-T1
Valid prediction for snap_scaffold_3-snap.321-T1
Valid prediction for snap_scaffold_3-snap.309-T1
Valid prediction for GlimmerHMM_glimmerT_6123-T1
Valid prediction for GeneMark_model.10085_t
Valid prediction for GlimmerHMM_glimmerT_6136-T1
Valid prediction for snap_scaffold_3-snap.299-T1
Valid prediction for Augustus_model.g4020.t1
Valid prediction for GlimmerHMM_glimmerT_6120-T1
Valid prediction for Augustus_model.g4021.t1
Valid prediction for GlimmerHMM_glimmerT_6115-T1
Valid prediction for GlimmerHMM_glimmerT_6122-T1
Valid prediction for GeneMark_model.10057_t
Valid prediction for snap_scaffold_3-snap.313-T1
Valid prediction for snap_scaffold_3-snap.308-T1
Valid prediction for snap_scaffold_3-snap.287-T1
Valid prediction for snap_scaffold_3-snap.297-T1
Valid prediction for snap_scaffold_3-snap.290-T1
Valid prediction for GeneMark_model.10036_t
Valid prediction for GlimmerHMM_glimmerT_6128-T1
Valid prediction for GeneMark_model.10072_t
Couldn't classify 18662, 18794
Couldn't classify 19600, 19738
Sorry, prediction pasa_asmbl_40781.p1 fails validation.
(CAG)	 TC	18662-18794	GT	AGG
(ATT)	 AG	18977-19055	GT	AGG
(GGA)	 AG	19289-19348	GT	GAG
(AAG)	 AG	19600-19738	AT	GGA
-recovered pasa_asmbl_40781.p1, internal, 18977, 19055
-recovered pasa_asmbl_40781.p1, internal, 19289, 19348
Valid prediction for GeneMark_model.10048_t
Valid prediction for snap_scaffold_3-snap.295-T1
Valid prediction for snap_scaffold_3-snap.301-T1
Valid prediction for GeneMark_model.10081_t
Valid prediction for GeneMark_model.10051_t
Valid prediction for GeneMark_model.10079_t
Valid prediction for GeneMark_model.10069_t
Valid prediction for snap_scaffold_3-snap.314-T1
Valid prediction for Augustus_model.g4018.t1
Valid prediction for GeneMark_model.10075_t
Valid prediction for Augustus_model.g4025.t1
Valid prediction for snap_scaffold_3-snap.318-T1
Valid prediction for GlimmerHMM_glimmerT_6116-T1
Valid prediction for snap_scaffold_3-snap.288-T1
Valid prediction for Augustus_model.g4019.t1
Couldn't classify 40929, 41066
Couldn't classify 44822, 44989
Sorry, prediction pasa_asmbl_39791.p1 fails validation.
(GGC)	 CA	40929-41066	GT	AGG
(CCA)	 AG	42607-42708	GT	TGG
(CAA)	 AG	44822-44989	AC	AGA
-recovered pasa_asmbl_39791.p1, internal, 42607, 42708
Valid prediction for Augustus_model.g4022.t1
Valid prediction for GeneMark_model.10065_t
Valid prediction for GlimmerHMM_glimmerT_6135-T1
Valid prediction for GeneMark_model.10059_t
Valid prediction for snap_scaffold_3-snap.320-T1
Valid prediction for GeneMark_model.10061_t
Valid prediction for snap_scaffold_3-snap.300-T1
Couldn't classify 21655, 21919
Sorry, prediction pasa_asmbl_39788.p1 fails validation.
(ATG)	 AC	20248-20250	GT	TGG
(ATG)	 AG	21086-21181	GT	ATG
(GGT)	 AG	21320-21348	GT	AGG
(GAT)	 AG	21481-21534	GT	AAG
(GTT)	 AG	21655-21919	GG	CCG
-recovered pasa_asmbl_39788.p1, initial, 20248, 20250
-recovered pasa_asmbl_39788.p1, initial, 21086, 21181
-recovered pasa_asmbl_39788.p1, internal, 21086, 21181
-recovered pasa_asmbl_39788.p1, internal, 21320, 21348
-recovered pasa_asmbl_39788.p1, internal, 21481, 21534
Valid prediction for Augustus_model.g4027.t1
Valid prediction for snap_scaffold_3-snap.323-T1
Valid prediction for GeneMark_model.10074_t
Valid prediction for snap_scaffold_3-snap.312-T1
Valid prediction for snap_scaffold_3-snap.285-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.10035_t
Valid prediction for GeneMark_model.10086_t
Valid prediction for GeneMark_model.10076_t
Valid prediction for GeneMark_model.10046_t
Couldn't classify 128083, 128256
Sorry, prediction pasa_asmbl_39657.p1 fails validation.
(ATG)	 AG	125435-125562	GT	CCG
(GAA)	 AG	125890-125985	GT	GAG
(ACA)	 AG	126120-126198	GT	CGG
(GAT)	 AG	126622-126754	GT	AGG
(ACG)	 AG	127209-127353	GT	CAG
(GTC)	 AG	127782-127844	GT	AAG
(GGT)	 AG	127939-127996	GT	AGG
(GTG)	 AG	128083-128256	GT	AGG
-recovered pasa_asmbl_39657.p1, initial, 125435, 125562
add_exon() Sorry, pasa_asmbl_39657.p1 125890-125985-terminal-1 is invalid.
-recovered pasa_asmbl_39657.p1, terminal, 125890, 125985
-recovered pasa_asmbl_39657.p1, internal, 125435, 125562
-recovered pasa_asmbl_39657.p1, internal, 125890, 125985
-recovered pasa_asmbl_39657.p1, internal, 126120, 126198
-recovered pasa_asmbl_39657.p1, internal, 126622, 126754
-recovered pasa_asmbl_39657.p1, internal, 127209, 127353
-recovered pasa_asmbl_39657.p1, internal, 127782, 127844
-recovered pasa_asmbl_39657.p1, internal, 127939, 127996
-recovered pasa_asmbl_39657.p1, internal, 128083, 128256
Couldn't classify 150220, 150240
Sorry, prediction GeneMark_model.10052_t fails validation.
(GGA)	 AG	150220-150240	GT	GGG
(GAG)	 AG	150264-150347	GT	GGG
(GGT)	 AG	150377-150412	GT	GGG
(GAG)	 AG	150471-150533	GT	GGG
(CAC)	 AG	150556-150570	GT	GGG
(AGG)	 AG	150606-150659	GT	CTG
(AAG)	 AG	152812-152865	GT	CCG
(GCC)	 AG	153008-153049	GT	GGG
(GTG)	 AG	153139-153153	GT	AAG
(CCC)	 AG	153194-153205	GT	ATG
(GGG)	 AG	153436-153473	GT	TGG
(CTC)	 AG	153648-153726	GT	GGG
(GTG)	 AG	154436-154486	GT	GGG
(GGA)	 AG	154570-154839	GT	GAG
(AGA)	 AG	154879-154893	GT	GAG
(TGA)	 AG	154920-154928	GC	GGG
(AAC)	 AG	154952-155185	GT	GAG
(AGA)	 AG	155211-155235	CA	GAC
-recovered GeneMark_model.10052_t, terminal, 155211, 155235
-recovered GeneMark_model.10052_t, internal, 150220, 150240
-recovered GeneMark_model.10052_t, internal, 150264, 150347
-recovered GeneMark_model.10052_t, internal, 150377, 150412
-recovered GeneMark_model.10052_t, internal, 150471, 150533
-recovered GeneMark_model.10052_t, internal, 150556, 150570
-recovered GeneMark_model.10052_t, internal, 150606, 150659
-recovered GeneMark_model.10052_t, internal, 152812, 152865
-recovered GeneMark_model.10052_t, internal, 153008, 153049
-recovered GeneMark_model.10052_t, internal, 153139, 153153
-recovered GeneMark_model.10052_t, internal, 153194, 153205
-recovered GeneMark_model.10052_t, internal, 153436, 153473
-recovered GeneMark_model.10052_t, internal, 153648, 153726
-recovered GeneMark_model.10052_t, internal, 154436, 154486
-recovered GeneMark_model.10052_t, internal, 154570, 154839
-recovered GeneMark_model.10052_t, internal, 154879, 154893
-recovered GeneMark_model.10052_t, internal, 154920, 154928
-recovered GeneMark_model.10052_t, internal, 154952, 155185
Valid prediction for snap_scaffold_3-snap.294-T1
Valid prediction for GeneMark_model.10041_t
Valid prediction for GeneMark_model.10044_t
Valid prediction for snap_scaffold_3-snap.317-T1
Valid prediction for GlimmerHMM_glimmerT_6125-T1
Valid prediction for snap_scaffold_3-snap.292-T1
Valid prediction for snap_scaffold_3-snap.324-T1
Valid prediction for snap_scaffold_3-snap.296-T1
Valid prediction for GeneMark_model.10080_t
Valid prediction for GlimmerHMM_glimmerT_6130-T1
Valid prediction for snap_scaffold_3-snap.289-T1
Valid prediction for GeneMark_model.10037_t
Valid prediction for GlimmerHMM_glimmerT_6131-T1
Valid prediction for GlimmerHMM_glimmerT_6111-T1
Valid prediction for pasa_asmbl_38659.p1
Valid prediction for GeneMark_model.10089_t
Valid prediction for snap_scaffold_3-snap.319-T1
Valid prediction for Augustus_model.g4023.t1
Valid prediction for snap_scaffold_3-snap.311-T1
Valid prediction for GeneMark_model.10043_t
Couldn't classify 130637, 130729
Sorry, prediction pasa_asmbl_38657.p1 fails validation.
(GTG)	 GC	130637-130729	GT	AGG
(TTT)	 AG	130957-131086	GT	GAG
(TCA)	 AG	131203-131885	CC	AAC
add_exon() Sorry, pasa_asmbl_38657.p1 130957-131086-terminal-3 is invalid.
-recovered pasa_asmbl_38657.p1, terminal, 130957, 131086
-recovered pasa_asmbl_38657.p1, terminal, 131203, 131885
-recovered pasa_asmbl_38657.p1, internal, 130957, 131086
Valid prediction for GeneMark_model.10087_t
Valid prediction for snap_scaffold_3-snap.305-T1
Valid prediction for GeneMark_model.10053_t
Valid prediction for snap_scaffold_3-snap.328-T1
Valid prediction for Augustus_model.g4017.t1
Valid prediction for snap_scaffold_3-snap.306-T1
Valid prediction for snap_scaffold_3-snap.304-T1
Valid prediction for GlimmerHMM_glimmerT_6133-T1
Valid prediction for GlimmerHMM_glimmerT_6114-T1
Valid prediction for GlimmerHMM_glimmerT_6117-T1
Valid prediction for GeneMark_model.10071_t
Valid prediction for snap_scaffold_3-snap.286-T1
Valid prediction for GlimmerHMM_glimmerT_6119-T1
Valid prediction for snap_scaffold_3-snap.327-T1
Valid prediction for snap_scaffold_3-snap.284-T1
Valid prediction for GeneMark_model.10068_t
Valid prediction for snap_scaffold_3-snap.330-T1
Valid prediction for snap_scaffold_3-snap.298-T1
Valid prediction for snap_scaffold_3-snap.307-T1
Valid prediction for snap_scaffold_3-snap.326-T1
Valid prediction for GeneMark_model.10078_t
Valid prediction for GeneMark_model.10060_t
Valid prediction for GeneMark_model.10039_t
Valid prediction for GeneMark_model.10058_t
Valid prediction for GeneMark_model.10066_t
Valid prediction for snap_scaffold_3-snap.329-T1
Valid prediction for snap_scaffold_3-snap.322-T1
Valid prediction for HiQ_model.g4029.t1
Valid prediction for GeneMark_model.10062_t
Valid prediction for Augustus_model.g4024.t1
Valid prediction for Augustus_model.g4026.t1
Valid prediction for GeneMark_model.10084_t
Valid prediction for snap_scaffold_3-snap.316-T1
Valid prediction for CodingQuarry_transcript_45959-T1
Valid prediction for GeneMark_model.10050_t
Valid prediction for GeneMark_model.10082_t
Valid prediction for GeneMark_model.10070_t
Valid prediction for GeneMark_model.10073_t
Valid prediction for CodingQuarry_transcript_45957-T1
Valid prediction for pasa_asmbl_38661.p1
Valid prediction for GlimmerHMM_glimmerT_6134-T1
Valid prediction for GeneMark_model.10054_t
Valid prediction for snap_scaffold_3-snap.331-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 9850, rend_intergenic: 5637  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11285, rend_intergenic: 10467  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14775, rend_intergenic: 11442  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30038, rend_intergenic: 26452  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34477, rend_intergenic: 30552  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59719, rend_intergenic: 44852  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66581, rend_intergenic: 63598  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67462, rend_intergenic: 66709  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95322, rend_intergenic: 86924  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97949, rend_intergenic: 96817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118626, rend_intergenic: 117723  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127879, rend_intergenic: 126512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146679, rend_intergenic: 136341  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151578, rend_intergenic: 149075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160282, rend_intergenic: 151649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184504, rend_intergenic: 161940  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 195478
-exon list size: 848


building trellis

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28.9    
29.1    
29.2    
29.3    
29.4    
29.5    
29.6    
29.8    
29.9    
30.0    
30.1    
30.2    
30.4    
30.5    
30.6    
30.7    
30.8    
30.9    
31.1    
31.2    
31.3    
31.4    
31.5    
31.6    
31.8    
31.9    
32.0    
32.1    
32.2    
32.4    
32.5    
32.6    
32.7    
32.8    
32.9    
33.1    
33.2    
33.3    
33.4    
33.5    
33.6    
33.8    
33.9    
34.0    
34.1    
34.2    
34.4    
34.5    
34.6    
34.7    
34.8    
34.9    
35.1    
35.2    
35.3    
35.4    
35.5    
35.6    
35.8    
35.9    
36.0    
36.1    
36.2    
36.4    
36.5    
36.6    
36.7    
36.8    
36.9    
37.1    
37.2    
37.3    
37.4    
37.5    
37.6    
37.8    
37.9    
38.0    
38.1    
38.2    
38.4    
38.5    
38.6    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.4    
39.5    
39.6    
39.8    
39.9    
40.0    
40.1    
40.2    
40.4    
40.5    
40.6    
40.7    
40.8    
40.9    
41.1    
41.2    
41.3    
41.4    
41.5    
41.6    
41.8    
41.9    
42.0    
42.1    
42.2    
42.4    
42.5    
42.6    
42.7    
42.8    
42.9    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.8    
43.9    
44.0    
44.1    
44.2    
44.4    
44.5    
44.6    
44.7    
44.8    
44.9    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.1    
46.2    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.8    
47.9    
48.0    
48.1    
48.2    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.8    
49.9    
50.0    
50.1    
50.2    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.8    
51.9    
52.0    
52.1    
52.2    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.8    
53.9    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.1    
55.2    
55.3    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.1    
56.2    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.1    
57.2    
57.3    
57.4    
57.5    
57.6    
57.8    
57.9    
58.0    
58.1    
58.2    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.1    
59.2    
59.3    
59.4    
59.5    
59.6    
59.8    
59.9    
60.0    
60.1    
60.2    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.4    
61.5    
61.6    
61.8    
61.9    
62.0    
62.1    
62.2    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.1    
63.2    
63.3    
63.4    
63.5    
63.6    
63.8    
63.9    
64.0    
64.1    
64.2    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.1    
65.2    
65.3    
65.4    
65.5    
65.6    
65.8    
65.9    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.1    
67.2    
67.3    
67.4    
67.5    
67.6    
67.8    
67.9    
68.0    
68.1    
68.2    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.1    
69.2    
69.3    
69.4    
69.5    
69.6    
69.8    
69.9    
70.0    
70.1    
70.2    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.1    
71.2    
71.3    
71.4    
71.5    
71.6    
71.8    
71.9    
72.0    
72.1    
72.2    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.8    
73.9    
74.0    
74.1    
74.2    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.8    
75.9    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.8    
77.9    
78.0    
78.1    
78.2    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.8    
79.9    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.8    
81.9    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.8    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.1    
85.2    
85.3    
85.4    
85.5    
85.6    
85.8    
85.9    
86.0    
86.1    
86.2    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.1    
87.2    
87.3    
87.4    
87.5    
87.6    
87.8    
87.9    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.1    
89.2    
89.3    
89.4    
89.5    
89.6    
89.8    
89.9    
90.0    
90.1    
90.2    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.1    
91.2    
91.3    
91.4    
91.5    
91.6    
91.8    
91.9    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.1    
93.2    
93.3    
93.4    
93.5    
93.6    
93.8    
93.9    
94.0    
94.1    
94.2    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.1    
95.2    
95.3    
95.4    
95.5    
95.6    
95.8    
95.9    
96.0    
96.1    
96.2    
96.4    
96.5    
96.6    
96.7    
96.8    
96.9    
97.1    
97.2    
97.3    
97.4    
97.5    
97.6    
97.8    
97.9    
98.0    
98.1    
98.2    
98.4    
98.5    
98.6    
98.7    
98.8    
98.9    
99.1    
99.2    
99.3    
99.4    
99.5    
99.6    
99.8    
99.9    
-found 33 predictions from path traversal
Error with prediction: snap lend_intergenic: 9850, rend_intergenic: 5637  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11285, rend_intergenic: 10467  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14775, rend_intergenic: 11442  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 30038, rend_intergenic: 26452  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 34477, rend_intergenic: 30552  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 59719, rend_intergenic: 44852  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66581, rend_intergenic: 63598  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67462, rend_intergenic: 66709  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 95322, rend_intergenic: 86924  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97949, rend_intergenic: 96817  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 118626, rend_intergenic: 117723  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 127879, rend_intergenic: 126512  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146679, rend_intergenic: 136341  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 151578, rend_intergenic: 149075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 160282, rend_intergenic: 151649  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 184504, rend_intergenic: 161940  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 22 predictions persist after filtering for low support