-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2985 -reading genomic sequence. ** Processing features (+) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: +) -loading gene prediction evidence. (strand: +)Couldn't classify 862, 1052 Sorry, prediction Augustus_model.g42234.t1 fails validation. (AGA) AG 862-1052 GT ACG -recovered Augustus_model.g42234.t1, internal, 862, 1052 -loading the search evidence (protein and EST search results, strand: +) -scoring exons (strand: +) ** Processing features (-) -finding all potential splice sites, looking for GT/GC donors and AG acceptors. -finding all potential starts and stops. (strand: -) -loading gene prediction evidence. (strand: -)Couldn't classify 250, 288 Sorry, prediction GeneMark_model.110726_t fails validation. (GAA) AG 250-288 GT AGG (GGA) AG 313-321 GT AGG (GAG) AG 380-397 GT AAG (GGA) AG 422-433 GT AGG (GGA) AG 458-469 GT AGG (GGA) AG 494-505 GT AGG (GGA) AG 530-541 GT AGG (TAG) AG 566-584 TC GAT -recovered GeneMark_model.110726_t, terminal, 566, 584 -recovered GeneMark_model.110726_t, internal, 250, 288 -recovered GeneMark_model.110726_t, internal, 313, 321 -recovered GeneMark_model.110726_t, internal, 380, 397 -recovered GeneMark_model.110726_t, internal, 422, 433 -recovered GeneMark_model.110726_t, internal, 458, 469 -recovered GeneMark_model.110726_t, internal, 494, 505 -recovered GeneMark_model.110726_t, internal, 530, 541 Couldn't classify 169, 541 Sorry, prediction snap_scaffold_2985-snap.1-T1 fails validation. (GAC) AG 169-541 GT AGG -recovered snap_scaffold_2985-snap.1-T1, internal, 169, 541 -loading the search evidence (protein and EST search results, strand: -) -scoring exons (strand: -) -building DP trellis -building trellis in range 1 - 1086 -exon list size: 25 building trellis 3.7 7.4 11.1 14.8 18.5 22.2 25.9 29.6 33.3 37.0 40.7 44.4 48.1 51.9 55.6 59.3 63.0 66.7 70.4 74.1 77.8 81.5 85.2 88.9 92.6 96.3 -found 1 predictions from path traversal GOT 5prime partial gene. -reporting highest scoring path thru the trellis. -found 0 predictions persist after filtering for low support