-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2934

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 188, 255
Sorry, prediction snap_scaffold_2934-snap.1-T1 fails validation.
(GTT)	 AG	188-255	GT	CTG
(GGC)	 AG	600-644	GT	ATG
(ATC)	 AG	808-930	CA	AAC
-recovered snap_scaffold_2934-snap.1-T1, terminal, 808, 930
-recovered snap_scaffold_2934-snap.1-T1, internal, 188, 255
-recovered snap_scaffold_2934-snap.1-T1, internal, 600, 644

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.110697_t
add_exon() Sorry, GeneMark_model.110697_t 765-943-terminal-1 is invalid.
Valid prediction for GlimmerHMM_glimmerT_63247-T1
add_exon() Sorry, GlimmerHMM_glimmerT_63247-T1 765-943-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1096
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support