-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2930

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 151, 407
Couldn't classify 969, 1087
Sorry, prediction GeneMark_model.110693_t fails validation.
(CGA)	 AG	151-407	GT	GGG
(TGA)	 AG	432-510	GT	GGG
(GTC)	 AG	969-1087	GC	AAG
-recovered GeneMark_model.110693_t, internal, 151, 407
-recovered GeneMark_model.110693_t, internal, 432, 510
-recovered GeneMark_model.110693_t, internal, 969, 1087
Couldn't classify 151, 407
Sorry, prediction snap_scaffold_2930-snap.1-T1 fails validation.
(CGA)	 AG	151-407	GT	GGG
(GTC)	 AG	969-1038	CT	GAC
-recovered snap_scaffold_2930-snap.1-T1, terminal, 969, 1038
-recovered snap_scaffold_2930-snap.1-T1, internal, 151, 407

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GlimmerHMM_glimmerT_63246-T1
Couldn't classify 828, 876
Sorry, prediction Augustus_model.g42219.t1 fails validation.
(ATG)	 GG	31-110	GT	GTG
(GAA)	 AG	828-876	GT	AGG
-recovered Augustus_model.g42219.t1, initial, 31, 110
-recovered Augustus_model.g42219.t1, internal, 828, 876

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1097
-exon list size: 9


building trellis

9.1    
18.2    
27.3    
36.4    
45.5    
54.5    
63.6    
72.7    
81.8    
90.9    
-found 1 predictions from path traversal

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support