-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2891

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)
-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for Augustus_model.g42207.t1
Couldn't classify 922, 973
Couldn't classify 1004, 1084
Sorry, prediction GeneMark_model.110665_t fails validation.
(GCC)	 AG	922-973	GT	TTG
(CCA)	 AG	1004-1084	GC	GCG
-recovered GeneMark_model.110665_t, internal, 922, 973
-recovered GeneMark_model.110665_t, internal, 1004, 1084
Couldn't classify 137, 190
Sorry, prediction snap_scaffold_2891-snap.1-T1 fails validation.
(TTA)	 AG	137-190	GT	ACG
(AAA)	 AG	728-863	GT	AGG
(GCC)	 AG	922-1026	CC	GAC
-recovered snap_scaffold_2891-snap.1-T1, terminal, 922, 1026
-recovered snap_scaffold_2891-snap.1-T1, internal, 137, 190
-recovered snap_scaffold_2891-snap.1-T1, internal, 728, 863

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1104
-exon list size: 10


building trellis

8.3    
16.7    
25.0    
33.3    
41.7    
50.0    
58.3    
66.7    
75.0    
83.3    
91.7    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support