-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2877

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 777, 800
Couldn't classify 962, 1082
Sorry, prediction GeneMark_model.110656_t fails validation.
(TTG)	 AG	777-800	GT	GCG
(AGG)	 AG	825-851	GT	GAG
(GGG)	 AG	874-882	GT	GAG
(AAG)	 AG	912-923	GT	GAG
(GAG)	 AG	962-1082	GC	GAG
-recovered GeneMark_model.110656_t, internal, 777, 800
-recovered GeneMark_model.110656_t, internal, 825, 851
-recovered GeneMark_model.110656_t, internal, 874, 882
-recovered GeneMark_model.110656_t, internal, 912, 923
-recovered GeneMark_model.110656_t, internal, 962, 1082
Valid prediction for snap_scaffold_2877-snap.1-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1106
-exon list size: 16


building trellis

5.6    
11.1    
16.7    
22.2    
27.8    
33.3    
38.9    
44.4    
50.0    
55.6    
61.1    
66.7    
72.2    
77.8    
83.3    
88.9    
94.4    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support