-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_28/scaffold_28_8706451-8947455

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.105839_t
Valid prediction for snap_scaffold_28-snap.2020-T1
Valid prediction for snap_scaffold_28-snap.2019-T1
Valid prediction for GeneMark_model.105894_t
Valid prediction for Augustus_model.g40448.t1
Valid prediction for snap_scaffold_28-snap.1999-T1
Valid prediction for Augustus_model.g40454.t1
Valid prediction for GeneMark_model.105860_t
Valid prediction for GeneMark_model.105901_t
Valid prediction for GlimmerHMM_glimmerT_60763-T1
Valid prediction for GlimmerHMM_glimmerT_60777-T1
Valid prediction for GeneMark_model.105892_t
Valid prediction for Augustus_model.g40449.t1
Valid prediction for GlimmerHMM_glimmerT_60773-T1
Valid prediction for GeneMark_model.105843_t
Valid prediction for GeneMark_model.105858_t
Valid prediction for snap_scaffold_28-snap.2035-T1
Valid prediction for GlimmerHMM_glimmerT_60754-T1
Valid prediction for GeneMark_model.105872_t
Valid prediction for GeneMark_model.105879_t
Valid prediction for snap_scaffold_28-snap.1997-T1
Valid prediction for GeneMark_model.105909_t
Valid prediction for snap_scaffold_28-snap.2033-T1
Valid prediction for GlimmerHMM_glimmerT_60781-T1
Valid prediction for snap_scaffold_28-snap.2021-T1
Valid prediction for GeneMark_model.105877_t
Valid prediction for snap_scaffold_28-snap.2010-T1
Valid prediction for snap_scaffold_28-snap.2007-T1
Valid prediction for GeneMark_model.105885_t
Valid prediction for snap_scaffold_28-snap.1998-T1
Valid prediction for GlimmerHMM_glimmerT_60759-T1
Valid prediction for GeneMark_model.105864_t
Valid prediction for GlimmerHMM_glimmerT_60755-T1
Valid prediction for GeneMark_model.105876_t
Valid prediction for GeneMark_model.105856_t
Valid prediction for GlimmerHMM_glimmerT_60770-T1
Valid prediction for GeneMark_model.105887_t
Valid prediction for snap_scaffold_28-snap.1988-T1
Valid prediction for GeneMark_model.105841_t
Valid prediction for GeneMark_model.105896_t
Valid prediction for GeneMark_model.105850_t
Valid prediction for GlimmerHMM_glimmerT_60778-T1
Valid prediction for snap_scaffold_28-snap.1992-T1
Valid prediction for snap_scaffold_28-snap.1996-T1
Valid prediction for snap_scaffold_28-snap.1995-T1
Valid prediction for snap_scaffold_28-snap.2024-T1
Valid prediction for Augustus_model.g40456.t1
Valid prediction for snap_scaffold_28-snap.2029-T1
Couldn't classify 58374, 59888
Sorry, prediction pasa_asmbl_38459.p1 fails validation.
(GGC)	 AC	58374-59888	CA	GAC
Valid prediction for GlimmerHMM_glimmerT_60775-T1
Valid prediction for GeneMark_model.105898_t
Valid prediction for GeneMark_model.105884_t
Valid prediction for snap_scaffold_28-snap.2001-T1
Valid prediction for snap_scaffold_28-snap.2015-T1
Valid prediction for GeneMark_model.105870_t
Valid prediction for snap_scaffold_28-snap.2002-T1
Valid prediction for GeneMark_model.105848_t
Valid prediction for snap_scaffold_28-snap.1991-T1
Valid prediction for GlimmerHMM_glimmerT_60768-T1
Valid prediction for snap_scaffold_28-snap.2018-T1
Valid prediction for snap_scaffold_28-snap.2016-T1
Valid prediction for GeneMark_model.105882_t
Valid prediction for GeneMark_model.105845_t
Valid prediction for GeneMark_model.105903_t
Valid prediction for GeneMark_model.105868_t
Valid prediction for GeneMark_model.105862_t
Valid prediction for snap_scaffold_28-snap.2004-T1
Valid prediction for GeneMark_model.105907_t
Valid prediction for GlimmerHMM_glimmerT_60757-T1
Valid prediction for snap_scaffold_28-snap.2027-T1
Valid prediction for Augustus_model.g40455.t1
Valid prediction for GlimmerHMM_glimmerT_60766-T1
Valid prediction for GlimmerHMM_glimmerT_60767-T1
Valid prediction for GeneMark_model.105889_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for GeneMark_model.105897_t
Valid prediction for HiQ_model.g40461.t1
Valid prediction for Augustus_model.g40459.t1
Valid prediction for snap_scaffold_28-snap.2005-T1
Valid prediction for snap_scaffold_28-snap.2040-T1
Valid prediction for GeneMark_model.105895_t
Valid prediction for snap_scaffold_28-snap.2025-T1
Valid prediction for GlimmerHMM_glimmerT_60765-T1
Valid prediction for snap_scaffold_28-snap.2039-T1
Valid prediction for snap_scaffold_28-snap.2006-T1
Valid prediction for Augustus_model.g40462.t1
Valid prediction for GlimmerHMM_glimmerT_60751-T1
Valid prediction for GeneMark_model.105890_t
Valid prediction for GeneMark_model.105900_t
Valid prediction for GeneMark_model.105857_t
Valid prediction for GeneMark_model.105874_t
Couldn't classify 204229, 204372
Sorry, prediction pasa_asmbl_37811.p1 fails validation.
(AGC)	 AC	204229-204372	GT	AGG
(GGG)	 AG	204468-204551	GT	AAG
(GAC)	 AG	204945-205086	GT	CGG
(GTT)	 AG	205214-205376	GT	AGG
(AAT)	 AG	205543-205777	AG	GAA
-recovered pasa_asmbl_37811.p1, terminal, 205543, 205777
-recovered pasa_asmbl_37811.p1, internal, 204468, 204551
-recovered pasa_asmbl_37811.p1, internal, 204945, 205086
-recovered pasa_asmbl_37811.p1, internal, 205214, 205376
Valid prediction for GlimmerHMM_glimmerT_60758-T1
Valid prediction for Augustus_model.g40450.t1
Valid prediction for HiQ_model.g40460.t1
Valid prediction for Augustus_model.g40443.t1
Valid prediction for snap_scaffold_28-snap.1993-T1
Valid prediction for GeneMark_model.105881_t
Valid prediction for snap_scaffold_28-snap.2014-T1
Valid prediction for snap_scaffold_28-snap.2031-T1
Valid prediction for snap_scaffold_28-snap.2037-T1
Valid prediction for GeneMark_model.105899_t
Valid prediction for CodingQuarry_transcript_43652-T1
Valid prediction for GeneMark_model.105844_t
Valid prediction for snap_scaffold_28-snap.2034-T1
Valid prediction for GeneMark_model.105908_t
Valid prediction for GeneMark_model.105873_t
Valid prediction for GlimmerHMM_glimmerT_60769-T1
Valid prediction for GeneMark_model.105865_t
Valid prediction for Augustus_model.g40447.t1
Couldn't classify 155263, 155775
Sorry, prediction pasa_asmbl_37814.p1 fails validation.
(ACA)	 CC	155263-155775	GG	AAG
Valid prediction for snap_scaffold_28-snap.2022-T1
Valid prediction for GeneMark_model.105875_t
Valid prediction for GlimmerHMM_glimmerT_60753-T1
Valid prediction for snap_scaffold_28-snap.2009-T1
Valid prediction for GeneMark_model.105906_t
Valid prediction for GeneMark_model.105878_t
Valid prediction for snap_scaffold_28-snap.2030-T1
Valid prediction for GlimmerHMM_glimmerT_60772-T1
Valid prediction for GeneMark_model.105838_t
Valid prediction for GeneMark_model.105852_t
Couldn't classify 35604, 35776
Sorry, prediction pasa_asmbl_37817.p1 fails validation.
(GAC)	 AG	35604-35776	GT	ACG
(AGC)	 AG	36000-36073	GT	CGG
(GTT)	 AG	36312-36415	AC	AAA
-recovered pasa_asmbl_37817.p1, terminal, 36312, 36415
-recovered pasa_asmbl_37817.p1, internal, 35604, 35776
-recovered pasa_asmbl_37817.p1, internal, 36000, 36073
Valid prediction for GeneMark_model.105869_t
Valid prediction for snap_scaffold_28-snap.2026-T1
Valid prediction for Augustus_model.g40452.t1
Valid prediction for GlimmerHMM_glimmerT_60782-T1
Valid prediction for GeneMark_model.105886_t
Valid prediction for GlimmerHMM_glimmerT_60756-T1
Valid prediction for snap_scaffold_28-snap.2013-T1
Valid prediction for GlimmerHMM_glimmerT_60761-T1
Valid prediction for GlimmerHMM_glimmerT_60779-T1
Valid prediction for snap_scaffold_28-snap.1990-T1
Valid prediction for GeneMark_model.105855_t
Valid prediction for GlimmerHMM_glimmerT_60764-T1
Valid prediction for snap_scaffold_28-snap.2023-T1
Valid prediction for snap_scaffold_28-snap.1994-T1
Valid prediction for GeneMark_model.105871_t
Valid prediction for snap_scaffold_28-snap.2036-T1
Valid prediction for GlimmerHMM_glimmerT_60760-T1
Valid prediction for Augustus_model.g40457.t1
Valid prediction for snap_scaffold_28-snap.2038-T1
Valid prediction for snap_scaffold_28-snap.2011-T1
Couldn't classify 235939, 236123
Couldn't classify 237260, 237371
Sorry, prediction pasa_asmbl_37920.p1 fails validation.
(AGT)	 GC	235939-236123	GT	AGG
(GGA)	 AG	237260-237371	AG	GGA
Valid prediction for GlimmerHMM_glimmerT_60762-T1
Valid prediction for GeneMark_model.105905_t
Valid prediction for Augustus_model.g40444.t1
Valid prediction for GeneMark_model.105867_t
Valid prediction for Augustus_model.g40458.t1
Valid prediction for GlimmerHMM_glimmerT_60752-T1
Valid prediction for GeneMark_model.105854_t
Valid prediction for GeneMark_model.105902_t
Valid prediction for GeneMark_model.105904_t
Valid prediction for GeneMark_model.105883_t
Valid prediction for snap_scaffold_28-snap.1989-T1
Valid prediction for snap_scaffold_28-snap.2003-T1
Valid prediction for GeneMark_model.105880_t
Valid prediction for GeneMark_model.105842_t
Valid prediction for snap_scaffold_28-snap.2032-T1
Valid prediction for Augustus_model.g40453.t1
Valid prediction for GeneMark_model.105888_t
Valid prediction for GeneMark_model.105910_t
Valid prediction for snap_scaffold_28-snap.1987-T1
Valid prediction for GeneMark_model.105849_t
Valid prediction for snap_scaffold_28-snap.2017-T1
Valid prediction for GeneMark_model.105846_t
Valid prediction for Augustus_model.g40446.t1
Valid prediction for GlimmerHMM_glimmerT_60774-T1
Valid prediction for snap_scaffold_28-snap.2000-T1
Valid prediction for GeneMark_model.105866_t
Valid prediction for Augustus_model.g40445.t1
Valid prediction for GlimmerHMM_glimmerT_60776-T1
Valid prediction for GlimmerHMM_glimmerT_60783-T1
Valid prediction for GeneMark_model.105893_t
Valid prediction for snap_scaffold_28-snap.2008-T1
Valid prediction for GeneMark_model.105853_t
Valid prediction for GeneMark_model.105863_t
Valid prediction for snap_scaffold_28-snap.2028-T1
Valid prediction for GeneMark_model.105840_t
Valid prediction for Augustus_model.g40451.t1
Valid prediction for GeneMark_model.105861_t
Valid prediction for snap_scaffold_28-snap.2012-T1
Valid prediction for GeneMark_model.105851_t
Valid prediction for GlimmerHMM_glimmerT_60780-T1
Valid prediction for GlimmerHMM_glimmerT_60771-T1
Couldn't classify 18687, 18798
Sorry, prediction pasa_asmbl_37818.p1 fails validation.
(GTT)	 TG	18687-18798	GT	AGG
(CTG)	 AG	19985-20176	GT	AGG
(AAA)	 AG	20436-20654	GT	AAG
(AGA)	 AG	20863-21087	GT	CAG
(AGG)	 AG	21557-21787	GT	CTG
(CCA)	 AG	23651-23745	AG	AGA
-recovered pasa_asmbl_37818.p1, terminal, 23651, 23745
-recovered pasa_asmbl_37818.p1, internal, 19985, 20176
-recovered pasa_asmbl_37818.p1, internal, 20436, 20654
-recovered pasa_asmbl_37818.p1, internal, 20863, 21087
-recovered pasa_asmbl_37818.p1, internal, 21557, 21787

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 7927, rend_intergenic: 5510  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11074, rend_intergenic: 9625  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16255, rend_intergenic: 11075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24581, rend_intergenic: 20042  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66355, rend_intergenic: 64303  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81101, rend_intergenic: 76932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99051, rend_intergenic: 92024  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99642, rend_intergenic: 99198  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117870, rend_intergenic: 104750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130825, rend_intergenic: 117883  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134688, rend_intergenic: 131660  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154411, rend_intergenic: 149732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155901, rend_intergenic: 154751  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168592, rend_intergenic: 155978  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176133, rend_intergenic: 169332  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177967, rend_intergenic: 176151  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186198, rend_intergenic: 180292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188781, rend_intergenic: 187054  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190294, rend_intergenic: 189670  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191863, rend_intergenic: 190311  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 241005
-exon list size: 901


building trellis

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55.6    
55.7    
55.8    
55.9    
56.0    
56.1    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.1    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.1    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.1    
59.2    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.1    
60.2    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.1    
61.2    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.1    
62.2    
62.3    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.1    
63.2    
63.3    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.1    
64.2    
64.3    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.2    
65.3    
65.4    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.2    
66.3    
66.4    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.2    
67.3    
67.4    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.2    
68.3    
68.4    
68.5    
68.7    
68.8    
68.9    
69.0    
69.1    
69.2    
69.3    
69.4    
69.5    
69.7    
69.8    
69.9    
70.0    
70.1    
70.2    
70.3    
70.4    
70.5    
70.7    
70.8    
70.9    
71.0    
71.1    
71.2    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.0    
72.1    
72.2    
72.3    
72.4    
72.5    
72.6    
72.8    
72.9    
73.0    
73.1    
73.2    
73.3    
73.4    
73.5    
73.6    
73.8    
73.9    
74.0    
74.1    
74.2    
74.3    
74.4    
74.5    
74.6    
74.8    
74.9    
75.0    
75.1    
75.2    
75.3    
75.4    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.2    
76.3    
76.4    
76.5    
76.6    
76.7    
76.9    
77.0    
77.1    
77.2    
77.3    
77.4    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.2    
78.3    
78.4    
78.5    
78.6    
78.7    
78.8    
79.0    
79.1    
79.2    
79.3    
79.4    
79.5    
79.6    
79.7    
79.8    
80.0    
80.1    
80.2    
80.3    
80.4    
80.5    
80.6    
80.7    
80.8    
81.0    
81.1    
81.2    
81.3    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.1    
82.2    
82.3    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.1    
84.2    
84.3    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.2    
85.3    
85.4    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.2    
86.3    
86.4    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.2    
87.3    
87.4    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.2    
88.3    
88.4    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.3    
90.4    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.3    
91.4    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.4    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.4    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.5    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.5    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.6    
99.7    
99.8    
99.9    
-found 48 predictions from path traversal
Error with prediction: snap lend_intergenic: 7927, rend_intergenic: 5510  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 11074, rend_intergenic: 9625  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 16255, rend_intergenic: 11075  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 24581, rend_intergenic: 20042  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 66355, rend_intergenic: 64303  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 81101, rend_intergenic: 76932  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99051, rend_intergenic: 92024  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 99642, rend_intergenic: 99198  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117870, rend_intergenic: 104750  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 130825, rend_intergenic: 117883  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134688, rend_intergenic: 131660  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 154411, rend_intergenic: 149732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 155901, rend_intergenic: 154751  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 168592, rend_intergenic: 155978  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 176133, rend_intergenic: 169332  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 177967, rend_intergenic: 176151  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 186198, rend_intergenic: 180292  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 188781, rend_intergenic: 187054  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 190294, rend_intergenic: 189670  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 191863, rend_intergenic: 190311  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 28 predictions persist after filtering for low support