-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_28/scaffold_28_6328893-6515055

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for GeneMark_model.105111_t
Valid prediction for Augustus_model.g40215.t1
Valid prediction for GeneMark_model.105093_t
Valid prediction for snap_scaffold_28-snap.1444-T1
Valid prediction for GeneMark_model.105100_t
Valid prediction for snap_scaffold_28-snap.1442-T1
Valid prediction for Augustus_model.g40211.t1
Valid prediction for snap_scaffold_28-snap.1453-T1
Valid prediction for snap_scaffold_28-snap.1427-T1
Valid prediction for snap_scaffold_28-snap.1439-T1
Valid prediction for GlimmerHMM_glimmerT_60404-T1
Valid prediction for GeneMark_model.105095_t
Valid prediction for Augustus_model.g40222.t1
Valid prediction for GeneMark_model.105088_t
Valid prediction for GlimmerHMM_glimmerT_60389-T1
Valid prediction for snap_scaffold_28-snap.1415-T1
Valid prediction for snap_scaffold_28-snap.1458-T1
Valid prediction for snap_scaffold_28-snap.1437-T1
Valid prediction for snap_scaffold_28-snap.1424-T1
Valid prediction for snap_scaffold_28-snap.1447-T1
Valid prediction for snap_scaffold_28-snap.1436-T1
Valid prediction for GeneMark_model.105083_t
Valid prediction for GeneMark_model.105107_t
Valid prediction for snap_scaffold_28-snap.1450-T1
Valid prediction for Augustus_model.g40214.t1
Valid prediction for GeneMark_model.105085_t
Valid prediction for GeneMark_model.105087_t
Valid prediction for snap_scaffold_28-snap.1416-T1
Sorry, intron length (7) is less than minimum required (10)
Valid prediction for snap_scaffold_28-snap.1443-T1
Valid prediction for Augustus_model.g40219.t1
Valid prediction for snap_scaffold_28-snap.1419-T1
Valid prediction for GeneMark_model.105082_t
Valid prediction for GlimmerHMM_glimmerT_60403-T1
Valid prediction for snap_scaffold_28-snap.1421-T1
Valid prediction for GeneMark_model.105102_t
Valid prediction for GeneMark_model.105092_t
Valid prediction for snap_scaffold_28-snap.1452-T1
Valid prediction for GeneMark_model.105098_t
Valid prediction for snap_scaffold_28-snap.1435-T1
Valid prediction for snap_scaffold_28-snap.1423-T1
Valid prediction for GlimmerHMM_glimmerT_60383-T1
Valid prediction for GeneMark_model.105113_t
Valid prediction for GlimmerHMM_glimmerT_60408-T1
Valid prediction for snap_scaffold_28-snap.1446-T1
Valid prediction for GlimmerHMM_glimmerT_60401-T1
Valid prediction for GeneMark_model.105117_t
Valid prediction for Augustus_model.g40223.t1
Valid prediction for GlimmerHMM_glimmerT_60400-T1
Valid prediction for GeneMark_model.105080_t
Valid prediction for snap_scaffold_28-snap.1420-T1
Valid prediction for GeneMark_model.105104_t
Valid prediction for GlimmerHMM_glimmerT_60386-T1
Valid prediction for GeneMark_model.105114_t
Valid prediction for GlimmerHMM_glimmerT_60402-T1
Valid prediction for GeneMark_model.105109_t
Valid prediction for GlimmerHMM_glimmerT_60393-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Couldn't classify 22512, 22544
Sorry, prediction pasa_asmbl_37668.p1 fails validation.
(CCC)	 TG	22512-22544	GT	AGG
(CGG)	 AG	25086-25364	GT	GGG
(CTC)	 AG	25713-25831	GT	AGG
(GTT)	 AG	26433-26486	GT	AGG
(TGA)	 AG	26836-27001	GT	AGG
(TTC)	 AG	27374-27548	GT	GGG
(ACA)	 AG	27841-28019	GT	AGG
(TTT)	 AG	28166-28266	GT	ATG
(GAG)	 AG	28388-28507	GT	ATG
(GAT)	 AG	28690-28812	GT	AGG
(AAT)	 AG	28916-29051	GT	CGG
(AAC)	 AG	29136-29198	GT	AGG
(GCG)	 AG	29489-29626	GT	AGG
(GTC)	 AG	29744-29959	AG	GAA
-recovered pasa_asmbl_37668.p1, terminal, 29744, 29959
-recovered pasa_asmbl_37668.p1, internal, 25086, 25364
-recovered pasa_asmbl_37668.p1, internal, 25713, 25831
-recovered pasa_asmbl_37668.p1, internal, 26433, 26486
-recovered pasa_asmbl_37668.p1, internal, 26836, 27001
-recovered pasa_asmbl_37668.p1, internal, 27374, 27548
-recovered pasa_asmbl_37668.p1, internal, 27841, 28019
-recovered pasa_asmbl_37668.p1, internal, 28166, 28266
-recovered pasa_asmbl_37668.p1, internal, 28388, 28507
-recovered pasa_asmbl_37668.p1, internal, 28690, 28812
-recovered pasa_asmbl_37668.p1, internal, 28916, 29051
-recovered pasa_asmbl_37668.p1, internal, 29136, 29198
-recovered pasa_asmbl_37668.p1, internal, 29489, 29626
Valid prediction for Augustus_model.g40220.t1
Valid prediction for GlimmerHMM_glimmerT_60377-T1
Valid prediction for snap_scaffold_28-snap.1448-T1
Valid prediction for snap_scaffold_28-snap.1434-T1
Valid prediction for GeneMark_model.105101_t
Couldn't classify 96903, 97035
Couldn't classify 97725, 97783
Sorry, prediction pasa_asmbl_37874.p1 fails validation.
(ATT)	 AT	96903-97035	GT	AGG
(ATG)	 AG	97152-97271	GT	GGG
(ATG)	 AG	97725-97783	GG	AGG
-recovered pasa_asmbl_37874.p1, initial, 97152, 97271
-recovered pasa_asmbl_37874.p1, internal, 97152, 97271
Valid prediction for snap_scaffold_28-snap.1454-T1
Valid prediction for GlimmerHMM_glimmerT_60395-T1
Valid prediction for snap_scaffold_28-snap.1438-T1
Valid prediction for GeneMark_model.105115_t
Valid prediction for snap_scaffold_28-snap.1449-T1
Sorry, intron length (5) is less than minimum required (10)
Valid prediction for snap_scaffold_28-snap.1430-T1
Couldn't classify 123269, 123539
Sorry, prediction pasa_asmbl_37658.p1 fails validation.
(CAA)	 AG	123269-123539	GT	AGG
(GTA)	 AG	123824-124023	CT	AGC
-recovered pasa_asmbl_37658.p1, terminal, 123824, 124023
-recovered pasa_asmbl_37658.p1, internal, 123269, 123539
Valid prediction for GeneMark_model.105112_t
Valid prediction for GeneMark_model.105105_t
Valid prediction for GeneMark_model.105086_t
Valid prediction for HiQ_model.g40224.t1
Valid prediction for GeneMark_model.105089_t
Valid prediction for GeneMark_model.105116_t
Valid prediction for Augustus_model.g40217.t1
Valid prediction for snap_scaffold_28-snap.1429-T1
Valid prediction for snap_scaffold_28-snap.1428-T1
Couldn't classify 116889, 117797
Sorry, prediction pasa_asmbl_37659.p1 fails validation.
(CTC)	 GT	116889-117797	GG	CGG
Valid prediction for Augustus_model.g40213.t1
Valid prediction for GlimmerHMM_glimmerT_60405-T1
Valid prediction for GeneMark_model.105096_t
Valid prediction for GlimmerHMM_glimmerT_60394-T1
Couldn't classify 99093, 99216
Couldn't classify 99854, 99921
Sorry, prediction pasa_asmbl_37880.p1 fails validation.
(GGC)	 CC	99093-99216	GT	GGG
(ACG)	 AG	99636-99755	GT	CGG
(ACA)	 AG	99854-99921	GG	GGG
-recovered pasa_asmbl_37880.p1, internal, 99636, 99755
Valid prediction for snap_scaffold_28-snap.1422-T1
Valid prediction for GeneMark_model.105108_t
Valid prediction for Augustus_model.g40218.t1
Valid prediction for Augustus_model.g40216.t1
Valid prediction for snap_scaffold_28-snap.1445-T1
Valid prediction for GlimmerHMM_glimmerT_60397-T1
Valid prediction for GlimmerHMM_glimmerT_60385-T1
Valid prediction for GlimmerHMM_glimmerT_60399-T1
Valid prediction for snap_scaffold_28-snap.1432-T1
Valid prediction for snap_scaffold_28-snap.1440-T1
Valid prediction for Augustus_model.g40227.t1
Valid prediction for snap_scaffold_28-snap.1425-T1
Valid prediction for snap_scaffold_28-snap.1441-T1
Valid prediction for GeneMark_model.105094_t
Valid prediction for GlimmerHMM_glimmerT_60406-T1
Valid prediction for GeneMark_model.105103_t
Valid prediction for snap_scaffold_28-snap.1417-T1
Valid prediction for HiQ_model.g40225.t1
Valid prediction for GlimmerHMM_glimmerT_60390-T1
Valid prediction for Augustus_model.g40212.t1
Valid prediction for Augustus_model.g40209.t1
Valid prediction for Augustus_model.g40226.t1
Couldn't classify 20911, 21401
Sorry, prediction pasa_asmbl_37670.p1 fails validation.
(ATG)	 GG	19620-19726	GT	AGG
(TAA)	 AG	19873-20048	GT	AGG
(ACC)	 AG	20150-20256	GT	GGG
(ATT)	 AG	20402-20510	GT	TGG
(GGA)	 AG	20599-20685	GT	AGG
(GTG)	 AG	20911-21401	GC	ACG
-recovered pasa_asmbl_37670.p1, initial, 19620, 19726
-recovered pasa_asmbl_37670.p1, internal, 19873, 20048
-recovered pasa_asmbl_37670.p1, internal, 20150, 20256
-recovered pasa_asmbl_37670.p1, internal, 20402, 20510
-recovered pasa_asmbl_37670.p1, internal, 20599, 20685
-recovered pasa_asmbl_37670.p1, internal, 20911, 21401
Valid prediction for GeneMark_model.105084_t
Valid prediction for Augustus_model.g40210.t1
Valid prediction for snap_scaffold_28-snap.1433-T1
Valid prediction for GeneMark_model.105099_t
Valid prediction for snap_scaffold_28-snap.1456-T1
Valid prediction for snap_scaffold_28-snap.1457-T1
Valid prediction for GlimmerHMM_glimmerT_60384-T1
Valid prediction for GlimmerHMM_glimmerT_60388-T1
Valid prediction for snap_scaffold_28-snap.1426-T1
Valid prediction for CodingQuarry_transcript_43594-T1
Valid prediction for GlimmerHMM_glimmerT_60387-T1
Valid prediction for GeneMark_model.105081_t
Valid prediction for GlimmerHMM_glimmerT_60391-T1
Valid prediction for GlimmerHMM_glimmerT_60382-T1
Valid prediction for GlimmerHMM_glimmerT_60398-T1
Valid prediction for GlimmerHMM_glimmerT_60392-T1
Valid prediction for GlimmerHMM_glimmerT_60380-T1
Valid prediction for snap_scaffold_28-snap.1455-T1
Valid prediction for GeneMark_model.105091_t
Valid prediction for GeneMark_model.105097_t
Valid prediction for GeneMark_model.105110_t
Valid prediction for snap_scaffold_28-snap.1431-T1
Valid prediction for GlimmerHMM_glimmerT_60379-T1
Valid prediction for snap_scaffold_28-snap.1451-T1
Valid prediction for GlimmerHMM_glimmerT_60381-T1
Valid prediction for GeneMark_model.105106_t
Valid prediction for GlimmerHMM_glimmerT_60378-T1
Valid prediction for GlimmerHMM_glimmerT_60407-T1
Couldn't classify 51187, 51237
Sorry, prediction pasa_asmbl_37665.p1 fails validation.
(GAT)	 GA	51187-51237	GT	AGG
(GAC)	 AG	52174-52252	GT	ATG
(GGG)	 AG	52351-52439	GT	TGG
(GGA)	 AG	52556-52633	GT	AGG
(AAT)	 AG	53635-53733	AG	AGA
-recovered pasa_asmbl_37665.p1, terminal, 53635, 53733
-recovered pasa_asmbl_37665.p1, internal, 52174, 52252
-recovered pasa_asmbl_37665.p1, internal, 52351, 52439
-recovered pasa_asmbl_37665.p1, internal, 52556, 52633
Valid prediction for GeneMark_model.105090_t
Valid prediction for Augustus_model.g40221.t1
Valid prediction for CodingQuarry_transcript_43593-T1
Valid prediction for GlimmerHMM_glimmerT_60396-T1
Valid prediction for snap_scaffold_28-snap.1418-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 18353, rend_intergenic: 12655  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20043, rend_intergenic: 19434  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74244, rend_intergenic: 72921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97740, rend_intergenic: 86362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115603, rend_intergenic: 101682  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123118, rend_intergenic: 116860  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128459, rend_intergenic: 124074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133207, rend_intergenic: 131310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134687, rend_intergenic: 133270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173034, rend_intergenic: 171907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 186163
-exon list size: 771


building trellis

0.1    
0.3    
0.4    
0.5    
0.6    
0.8    
0.9    
1.0    
1.2    
1.3    
1.4    
1.6    
1.7    
1.8    
1.9    
2.1    
2.2    
2.3    
2.5    
2.6    
2.7    
2.8    
3.0    
3.1    
3.2    
3.4    
3.5    
3.6    
3.8    
3.9    
4.0    
4.1    
4.3    
4.4    
4.5    
4.7    
4.8    
4.9    
5.0    
5.2    
5.3    
5.4    
5.6    
5.7    
5.8    
6.0    
6.1    
6.2    
6.3    
6.5    
6.6    
6.7    
6.9    
7.0    
7.1    
7.2    
7.4    
7.5    
7.6    
7.8    
7.9    
8.0    
8.2    
8.3    
8.4    
8.5    
8.7    
8.8    
8.9    
9.1    
9.2    
9.3    
9.4    
9.6    
9.7    
9.8    
10.0    
10.1    
10.2    
10.3    
10.5    
10.6    
10.7    
10.9    
11.0    
11.1    
11.3    
11.4    
11.5    
11.6    
11.8    
11.9    
12.0    
12.2    
12.3    
12.4    
12.5    
12.7    
12.8    
12.9    
13.1    
13.2    
13.3    
13.5    
13.6    
13.7    
13.8    
14.0    
14.1    
14.2    
14.4    
14.5    
14.6    
14.7    
14.9    
15.0    
15.1    
15.3    
15.4    
15.5    
15.7    
15.8    
15.9    
16.0    
16.2    
16.3    
16.4    
16.6    
16.7    
16.8    
16.9    
17.1    
17.2    
17.3    
17.5    
17.6    
17.7    
17.9    
18.0    
18.1    
18.2    
18.4    
18.5    
18.6    
18.8    
18.9    
19.0    
19.1    
19.3    
19.4    
19.5    
19.7    
19.8    
19.9    
20.1    
20.2    
20.3    
20.4    
20.6    
20.7    
20.8    
21.0    
21.1    
21.2    
21.3    
21.5    
21.6    
21.7    
21.9    
22.0    
22.1    
22.3    
22.4    
22.5    
22.6    
22.8    
22.9    
23.0    
23.2    
23.3    
23.4    
23.5    
23.7    
23.8    
23.9    
24.1    
24.2    
24.3    
24.5    
24.6    
24.7    
24.8    
25.0    
25.1    
25.2    
25.4    
25.5    
25.6    
25.7    
25.9    
26.0    
26.1    
26.3    
26.4    
26.5    
26.6    
26.8    
26.9    
27.0    
27.2    
27.3    
27.4    
27.6    
27.7    
27.8    
27.9    
28.1    
28.2    
28.3    
28.5    
28.6    
28.7    
28.8    
29.0    
29.1    
29.2    
29.4    
29.5    
29.6    
29.8    
29.9    
30.0    
30.1    
30.3    
30.4    
30.5    
30.7    
30.8    
30.9    
31.0    
31.2    
31.3    
31.4    
31.6    
31.7    
31.8    
32.0    
32.1    
32.2    
32.3    
32.5    
32.6    
32.7    
32.9    
33.0    
33.1    
33.2    
33.4    
33.5    
33.6    
33.8    
33.9    
34.0    
34.2    
34.3    
34.4    
34.5    
34.7    
34.8    
34.9    
35.1    
35.2    
35.3    
35.4    
35.6    
35.7    
35.8    
36.0    
36.1    
36.2    
36.4    
36.5    
36.6    
36.7    
36.9    
37.0    
37.1    
37.3    
37.4    
37.5    
37.6    
37.8    
37.9    
38.0    
38.2    
38.3    
38.4    
38.6    
38.7    
38.8    
38.9    
39.1    
39.2    
39.3    
39.5    
39.6    
39.7    
39.8    
40.0    
40.1    
40.2    
40.4    
40.5    
40.6    
40.8    
40.9    
41.0    
41.1    
41.3    
41.4    
41.5    
41.7    
41.8    
41.9    
42.0    
42.2    
42.3    
42.4    
42.6    
42.7    
42.8    
42.9    
43.1    
43.2    
43.3    
43.5    
43.6    
43.7    
43.9    
44.0    
44.1    
44.2    
44.4    
44.5    
44.6    
44.8    
44.9    
45.0    
45.1    
45.3    
45.4    
45.5    
45.7    
45.8    
45.9    
46.1    
46.2    
46.3    
46.4    
46.6    
46.7    
46.8    
47.0    
47.1    
47.2    
47.3    
47.5    
47.6    
47.7    
47.9    
48.0    
48.1    
48.3    
48.4    
48.5    
48.6    
48.8    
48.9    
49.0    
49.2    
49.3    
49.4    
49.5    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.5    
50.6    
50.7    
50.8    
51.0    
51.1    
51.2    
51.4    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.3    
52.4    
52.5    
52.7    
52.8    
52.9    
53.0    
53.2    
53.3    
53.4    
53.6    
53.7    
53.8    
53.9    
54.1    
54.2    
54.3    
54.5    
54.6    
54.7    
54.9    
55.0    
55.1    
55.2    
55.4    
55.5    
55.6    
55.8    
55.9    
56.0    
56.1    
56.3    
56.4    
56.5    
56.7    
56.8    
56.9    
57.1    
57.2    
57.3    
57.4    
57.6    
57.7    
57.8    
58.0    
58.1    
58.2    
58.3    
58.5    
58.6    
58.7    
58.9    
59.0    
59.1    
59.2    
59.4    
59.5    
59.6    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.5    
60.7    
60.8    
60.9    
61.1    
61.2    
61.3    
61.4    
61.6    
61.7    
61.8    
62.0    
62.1    
62.2    
62.4    
62.5    
62.6    
62.7    
62.9    
63.0    
63.1    
63.3    
63.4    
63.5    
63.6    
63.8    
63.9    
64.0    
64.2    
64.3    
64.4    
64.6    
64.7    
64.8    
64.9    
65.1    
65.2    
65.3    
65.5    
65.6    
65.7    
65.8    
66.0    
66.1    
66.2    
66.4    
66.5    
66.6    
66.8    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.7    
67.8    
67.9    
68.0    
68.2    
68.3    
68.4    
68.6    
68.7    
68.8    
69.0    
69.1    
69.2    
69.3    
69.5    
69.6    
69.7    
69.9    
70.0    
70.1    
70.2    
70.4    
70.5    
70.6    
70.8    
70.9    
71.0    
71.2    
71.3    
71.4    
71.5    
71.7    
71.8    
71.9    
72.1    
72.2    
72.3    
72.4    
72.6    
72.7    
72.8    
73.0    
73.1    
73.2    
73.4    
73.5    
73.6    
73.7    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.8    
74.9    
75.0    
75.2    
75.3    
75.4    
75.5    
75.7    
75.8    
75.9    
76.1    
76.2    
76.3    
76.5    
76.6    
76.7    
76.8    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.7    
77.9    
78.0    
78.1    
78.3    
78.4    
78.5    
78.7    
78.8    
78.9    
79.0    
79.2    
79.3    
79.4    
79.6    
79.7    
79.8    
79.9    
80.1    
80.2    
80.3    
80.5    
80.6    
80.7    
80.9    
81.0    
81.1    
81.2    
81.4    
81.5    
81.6    
81.8    
81.9    
82.0    
82.1    
82.3    
82.4    
82.5    
82.7    
82.8    
82.9    
83.1    
83.2    
83.3    
83.4    
83.6    
83.7    
83.8    
84.0    
84.1    
84.2    
84.3    
84.5    
84.6    
84.7    
84.9    
85.0    
85.1    
85.3    
85.4    
85.5    
85.6    
85.8    
85.9    
86.0    
86.2    
86.3    
86.4    
86.5    
86.7    
86.8    
86.9    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.8    
88.0    
88.1    
88.2    
88.4    
88.5    
88.6    
88.7    
88.9    
89.0    
89.1    
89.3    
89.4    
89.5    
89.7    
89.8    
89.9    
90.0    
90.2    
90.3    
90.4    
90.6    
90.7    
90.8    
90.9    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.8    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.8    
92.9    
93.0    
93.1    
93.3    
93.4    
93.5    
93.7    
93.8    
93.9    
94.0    
94.2    
94.3    
94.4    
94.6    
94.7    
94.8    
95.0    
95.1    
95.2    
95.3    
95.5    
95.6    
95.7    
95.9    
96.0    
96.1    
96.2    
96.4    
96.5    
96.6    
96.8    
96.9    
97.0    
97.2    
97.3    
97.4    
97.5    
97.7    
97.8    
97.9    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
99.0    
99.1    
99.2    
99.4    
99.5    
99.6    
99.7    
99.9    
-found 35 predictions from path traversal
Error with prediction: snap lend_intergenic: 18353, rend_intergenic: 12655  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 20043, rend_intergenic: 19434  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 74244, rend_intergenic: 72921  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 97740, rend_intergenic: 86362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 115603, rend_intergenic: 101682  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 123118, rend_intergenic: 116860  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 128459, rend_intergenic: 124074  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 133207, rend_intergenic: 131310  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 134687, rend_intergenic: 133270  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 173034, rend_intergenic: 171907  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 24 predictions persist after filtering for low support