-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_28/scaffold_28_2785923-2918616

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_28-snap.692-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GeneMark_model.104344_t
Valid prediction for GlimmerHMM_glimmerT_59824-T1
Valid prediction for Augustus_model.g39824.t1
Valid prediction for snap_scaffold_28-snap.708-T1
Valid prediction for HiQ_model.g39819.t1
Valid prediction for GeneMark_model.104348_t
Valid prediction for GeneMark_model.104367_t
Valid prediction for pasa_asmbl_38110.p1
Valid prediction for snap_scaffold_28-snap.707-T1
Valid prediction for snap_scaffold_28-snap.701-T1
Valid prediction for Augustus_model.g39822.t1
Valid prediction for GeneMark_model.104355_t
Valid prediction for snap_scaffold_28-snap.714-T1
Valid prediction for GeneMark_model.104372_t
Valid prediction for GeneMark_model.104360_t
Valid prediction for GeneMark_model.104337_t
Valid prediction for GeneMark_model.104331_t
Couldn't classify 113786, 113830
Sorry, prediction pasa_asmbl_38113.p1 fails validation.
(CAG)	 AC	113786-113830	GT	TGG
(GCC)	 AG	114046-114170	GT	TGG
(CTA)	 AG	114647-114754	GT	AGG
(CCT)	 AG	114968-115097	GT	AGG
(CTA)	 AG	115329-115523	GT	CTG
(GAA)	 AG	115616-115730	GT	TCG
(AGA)	 AG	115934-116057	GT	ATG
(CAT)	 AG	116215-116366	GT	AGG
(CCT)	 AG	116682-116743	GT	AGG
(GCG)	 AG	116868-116971	GT	CTG
(TGA)	 AG	117998-118047	GT	AGG
(ACC)	 AG	118192-118291	GT	AGG
(CAA)	 AG	118420-118567	GT	GTG
(AGC)	 AG	118732-118829	GT	CTG
(GGA)	 AG	118943-119036	GT	AGG
(AAT)	 AG	119616-119675	CT	GAC
add_exon() Sorry, pasa_asmbl_38113.p1 116215-116366-terminal-2 is invalid.
-recovered pasa_asmbl_38113.p1, terminal, 116215, 116366
-recovered pasa_asmbl_38113.p1, terminal, 119616, 119675
-recovered pasa_asmbl_38113.p1, internal, 114046, 114170
-recovered pasa_asmbl_38113.p1, internal, 114647, 114754
-recovered pasa_asmbl_38113.p1, internal, 114968, 115097
-recovered pasa_asmbl_38113.p1, internal, 115329, 115523
-recovered pasa_asmbl_38113.p1, internal, 115616, 115730
-recovered pasa_asmbl_38113.p1, internal, 115934, 116057
-recovered pasa_asmbl_38113.p1, internal, 116215, 116366
-recovered pasa_asmbl_38113.p1, internal, 116682, 116743
-recovered pasa_asmbl_38113.p1, internal, 116868, 116971
-recovered pasa_asmbl_38113.p1, internal, 117998, 118047
-recovered pasa_asmbl_38113.p1, internal, 118192, 118291
-recovered pasa_asmbl_38113.p1, internal, 118420, 118567
-recovered pasa_asmbl_38113.p1, internal, 118732, 118829
-recovered pasa_asmbl_38113.p1, internal, 118943, 119036
Valid prediction for GlimmerHMM_glimmerT_59836-T1
Valid prediction for GlimmerHMM_glimmerT_59827-T1
Valid prediction for Augustus_model.g39821.t1
Valid prediction for GeneMark_model.104351_t
Valid prediction for GeneMark_model.104347_t
Valid prediction for GeneMark_model.104357_t
Valid prediction for Augustus_model.g39829.t1
Valid prediction for snap_scaffold_28-snap.703-T1
Valid prediction for snap_scaffold_28-snap.712-T1
Sorry, intron length (3) is less than minimum required (10)
Valid prediction for snap_scaffold_28-snap.689-T1
Valid prediction for GeneMark_model.104345_t
Valid prediction for snap_scaffold_28-snap.723-T1
Valid prediction for snap_scaffold_28-snap.698-T1
Valid prediction for GeneMark_model.104335_t
Valid prediction for GlimmerHMM_glimmerT_59837-T1
Valid prediction for GeneMark_model.104349_t
Valid prediction for snap_scaffold_28-snap.699-T1
Valid prediction for snap_scaffold_28-snap.716-T1
Valid prediction for snap_scaffold_28-snap.715-T1
Valid prediction for snap_scaffold_28-snap.700-T1
Valid prediction for Augustus_model.g39818.t1
Valid prediction for GeneMark_model.104359_t
Valid prediction for snap_scaffold_28-snap.721-T1
Valid prediction for GeneMark_model.104353_t
Valid prediction for GeneMark_model.104369_t
Valid prediction for GlimmerHMM_glimmerT_59825-T1
Valid prediction for snap_scaffold_28-snap.709-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for GlimmerHMM_glimmerT_59823-T1
Valid prediction for GeneMark_model.104365_t
Valid prediction for snap_scaffold_28-snap.705-T1
Valid prediction for GeneMark_model.104352_t
Valid prediction for GeneMark_model.104336_t
Valid prediction for GeneMark_model.104342_t
Valid prediction for GeneMark_model.104362_t
Valid prediction for snap_scaffold_28-snap.718-T1
Valid prediction for snap_scaffold_28-snap.710-T1
Valid prediction for GeneMark_model.104364_t
Valid prediction for snap_scaffold_28-snap.697-T1
Valid prediction for GeneMark_model.104340_t

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_28-snap.704-T1
Valid prediction for snap_scaffold_28-snap.691-T1
Valid prediction for HiQ_model.g39820.t1
Valid prediction for Augustus_model.g39827.t1
Valid prediction for GeneMark_model.104368_t
Valid prediction for GeneMark_model.104332_t
Valid prediction for CodingQuarry_transcript_43492-T1
Valid prediction for GeneMark_model.104373_t
Valid prediction for snap_scaffold_28-snap.706-T1
Valid prediction for snap_scaffold_28-snap.719-T1
Valid prediction for GeneMark_model.104356_t
Valid prediction for snap_scaffold_28-snap.694-T1
Valid prediction for GlimmerHMM_glimmerT_59830-T1
Valid prediction for Augustus_model.g39817.t1
Valid prediction for GlimmerHMM_glimmerT_59832-T1
Couldn't classify 61934, 62050
Couldn't classify 66820, 66969
Sorry, prediction pasa_asmbl_37419.p1 fails validation.
(AAC)	 GC	61934-62050	GT	AGG
(GTG)	 AG	62299-62444	GT	CGG
(AAA)	 AG	62559-62742	GT	AGG
(GTA)	 AG	62842-63034	GT	CGG
(ATA)	 AG	63192-63349	GT	AGG
(GTG)	 AG	63522-63686	GT	AGG
(GTG)	 AG	63963-64238	GT	AGG
(GTC)	 AG	65308-65457	GT	AGG
(GTG)	 AG	65642-65773	GT	AGG
(ATG)	 AG	66014-66124	GT	AGG
(GGC)	 AG	66539-66709	GT	AGG
(GAC)	 AG	66820-66969	GC	CGG
-recovered pasa_asmbl_37419.p1, initial, 66014, 66124
-recovered pasa_asmbl_37419.p1, internal, 62299, 62444
-recovered pasa_asmbl_37419.p1, internal, 62559, 62742
-recovered pasa_asmbl_37419.p1, internal, 62842, 63034
-recovered pasa_asmbl_37419.p1, internal, 63192, 63349
-recovered pasa_asmbl_37419.p1, internal, 63522, 63686
-recovered pasa_asmbl_37419.p1, internal, 63963, 64238
-recovered pasa_asmbl_37419.p1, internal, 65308, 65457
-recovered pasa_asmbl_37419.p1, internal, 65642, 65773
-recovered pasa_asmbl_37419.p1, internal, 66014, 66124
-recovered pasa_asmbl_37419.p1, internal, 66539, 66709
-recovered pasa_asmbl_37419.p1, internal, 66820, 66969
Couldn't classify 83996, 84112
Sorry, prediction pasa_asmbl_37417.p1 fails validation.
(GGT)	 CA	83996-84112	GT	AGG
(GGT)	 AG	84222-84295	GT	GCG
(GTT)	 AG	84544-84655	TG	AGT
-recovered pasa_asmbl_37417.p1, terminal, 84544, 84655
-recovered pasa_asmbl_37417.p1, internal, 84222, 84295
Valid prediction for GlimmerHMM_glimmerT_59829-T1
Couldn't classify 37000, 37075
Sorry, prediction pasa_asmbl_37423.p1 fails validation.
(GGC)	 AT	37000-37075	GT	CCG
(CCA)	 AG	37474-37539	GT	AGG
(CAA)	 AG	37800-38004	GT	AAG
(GTT)	 AG	38128-38270	GT	CGG
(TCC)	 AG	38482-38622	GT	ATG
(TTG)	 AG	39086-39234	GT	AGG
(GGT)	 AG	39429-39590	GG	GAG
-recovered pasa_asmbl_37423.p1, terminal, 39429, 39590
-recovered pasa_asmbl_37423.p1, internal, 37474, 37539
-recovered pasa_asmbl_37423.p1, internal, 37800, 38004
-recovered pasa_asmbl_37423.p1, internal, 38128, 38270
-recovered pasa_asmbl_37423.p1, internal, 38482, 38622
-recovered pasa_asmbl_37423.p1, internal, 39086, 39234
Valid prediction for snap_scaffold_28-snap.702-T1
Valid prediction for GeneMark_model.104341_t
Valid prediction for GeneMark_model.104350_t
Valid prediction for GlimmerHMM_glimmerT_59835-T1
Valid prediction for Augustus_model.g39823.t1
Valid prediction for GlimmerHMM_glimmerT_59834-T1
Valid prediction for GeneMark_model.104333_t
Valid prediction for pasa_asmbl_37408.p1
Valid prediction for GeneMark_model.104370_t
Valid prediction for GlimmerHMM_glimmerT_59822-T1
Valid prediction for GlimmerHMM_glimmerT_59826-T1
Valid prediction for pasa_asmbl_37427.p1
Valid prediction for GeneMark_model.104361_t
Valid prediction for CodingQuarry_transcript_43490-T1
Valid prediction for snap_scaffold_28-snap.696-T1
Valid prediction for snap_scaffold_28-snap.711-T1
Valid prediction for GeneMark_model.104346_t
Valid prediction for GeneMark_model.104354_t
Couldn't classify 52074, 52193
Sorry, prediction Augustus_model.g39826.t1 fails validation.
(AGT)	 AG	52074-52193	GT	ATG
(GGT)	 AG	52401-52452	GT	GGG
(CTG)	 AG	52588-52795	GT	AGG
(CTG)	 AG	53175-53219	GT	AGG
(CTG)	 AG	54817-55085	GT	AGG
(CAA)	 AG	55287-55448	GT	AGG
(CTG)	 AG	56223-56336	GT	AGG
(ATT)	 AG	56692-56865	GT	AGG
(GTG)	 AG	57123-57320	GT	AGG
(GGA)	 AG	57479-57679	GT	AGG
(TTG)	 AG	58073-58225	GT	AGG
(GTG)	 AG	58315-58437	GT	AGG
(ATA)	 AG	59183-59320	GT	AGG
(GTG)	 AG	59486-59650	GT	AGG
(TGG)	 AG	59824-60011	GT	TGG
(GCT)	 AG	60294-60336	GT	ACG
(GTG)	 AG	61047-61189	GT	AGG
(ACT)	 AG	61366-61600	GT	AGG
(GTG)	 AG	61928-62050	GT	AGG
(GTG)	 AG	62299-62444	GT	CGG
(AAA)	 AG	62559-62742	GT	AGG
(GTA)	 AG	62842-63034	GT	CGG
(ATA)	 AG	63192-63349	GT	AGG
(GTG)	 AG	63522-63686	GT	AGG
(GTG)	 AG	63963-64238	GT	AGG
(GTC)	 AG	65308-65457	GT	AGG
(GTG)	 AG	65642-65773	GT	AGG
(ATG)	 AG	66014-66124	GT	AGG
(GGC)	 AG	66539-66709	GT	AGG
(GAC)	 AG	66820-67041	GT	AGG
(GTG)	 AG	67274-67294	GT	AGG
(CCG)	 AG	67569-67619	CC	AGC
-recovered Augustus_model.g39826.t1, initial, 66014, 66124
add_exon() Sorry, Augustus_model.g39826.t1 53175-53219-terminal-1 is invalid.
-recovered Augustus_model.g39826.t1, terminal, 53175, 53219
-recovered Augustus_model.g39826.t1, terminal, 67569, 67619
-recovered Augustus_model.g39826.t1, internal, 52074, 52193
-recovered Augustus_model.g39826.t1, internal, 52401, 52452
-recovered Augustus_model.g39826.t1, internal, 52588, 52795
-recovered Augustus_model.g39826.t1, internal, 53175, 53219
-recovered Augustus_model.g39826.t1, internal, 54817, 55085
-recovered Augustus_model.g39826.t1, internal, 55287, 55448
-recovered Augustus_model.g39826.t1, internal, 56223, 56336
-recovered Augustus_model.g39826.t1, internal, 56692, 56865
-recovered Augustus_model.g39826.t1, internal, 57123, 57320
-recovered Augustus_model.g39826.t1, internal, 57479, 57679
-recovered Augustus_model.g39826.t1, internal, 58073, 58225
-recovered Augustus_model.g39826.t1, internal, 58315, 58437
-recovered Augustus_model.g39826.t1, internal, 59183, 59320
-recovered Augustus_model.g39826.t1, internal, 59486, 59650
-recovered Augustus_model.g39826.t1, internal, 59824, 60011
-recovered Augustus_model.g39826.t1, internal, 60294, 60336
-recovered Augustus_model.g39826.t1, internal, 61047, 61189
-recovered Augustus_model.g39826.t1, internal, 61366, 61600
-recovered Augustus_model.g39826.t1, internal, 61928, 62050
-recovered Augustus_model.g39826.t1, internal, 62299, 62444
-recovered Augustus_model.g39826.t1, internal, 62559, 62742
-recovered Augustus_model.g39826.t1, internal, 62842, 63034
-recovered Augustus_model.g39826.t1, internal, 63192, 63349
-recovered Augustus_model.g39826.t1, internal, 63522, 63686
-recovered Augustus_model.g39826.t1, internal, 63963, 64238
-recovered Augustus_model.g39826.t1, internal, 65308, 65457
-recovered Augustus_model.g39826.t1, internal, 65642, 65773
-recovered Augustus_model.g39826.t1, internal, 66014, 66124
-recovered Augustus_model.g39826.t1, internal, 66539, 66709
-recovered Augustus_model.g39826.t1, internal, 66820, 67041
-recovered Augustus_model.g39826.t1, internal, 67274, 67294
Valid prediction for snap_scaffold_28-snap.717-T1
Valid prediction for Augustus_model.g39825.t1
Valid prediction for GlimmerHMM_glimmerT_59831-T1
Valid prediction for GeneMark_model.104339_t
Valid prediction for snap_scaffold_28-snap.695-T1
Valid prediction for HiQ_model.g39830.t1
Valid prediction for GeneMark_model.104334_t
Valid prediction for GeneMark_model.104366_t
Valid prediction for CodingQuarry_transcript_43491-T1
Valid prediction for snap_scaffold_28-snap.690-T1
Valid prediction for GlimmerHMM_glimmerT_59821-T1
Valid prediction for GeneMark_model.104358_t
Valid prediction for GlimmerHMM_glimmerT_59833-T1
Valid prediction for GlimmerHMM_glimmerT_59839-T1
Couldn't classify 121194, 121627
Sorry, prediction pasa_asmbl_37407.p1 fails validation.
(CCC)	 TG	121194-121627	GT	AGG
(CTG)	 AG	121770-121937	GT	AGG
(GTG)	 AG	122027-122177	GT	AGG
(GGG)	 AG	122551-122742	GT	AGG
(CTT)	 AG	124086-124260	GT	AGG
(TGT)	 AG	124408-125402	GG	GAG
-recovered pasa_asmbl_37407.p1, terminal, 124408, 125402
-recovered pasa_asmbl_37407.p1, internal, 121770, 121937
-recovered pasa_asmbl_37407.p1, internal, 122027, 122177
-recovered pasa_asmbl_37407.p1, internal, 122551, 122742
-recovered pasa_asmbl_37407.p1, internal, 124086, 124260
Valid prediction for GlimmerHMM_glimmerT_59828-T1
Couldn't classify 61068, 61189
Couldn't classify 61366, 61570
Sorry, prediction pasa_asmbl_37420.p1 fails validation.
(GTG)	 CG	61068-61189	GT	AGG
(ACT)	 AG	61366-61570	AG	AGA
Valid prediction for GeneMark_model.104363_t
Valid prediction for GeneMark_model.104338_t
Valid prediction for GeneMark_model.104343_t
Couldn't classify 10246, 10340
Sorry, prediction pasa_asmbl_37424.p1 fails validation.
(TAC)	 TG	10246-10340	GT	GTG
(GAA)	 AG	10709-10859	GT	CTG
(GCC)	 AG	11023-11080	GT	AGG
(GAG)	 AG	11264-11355	GG	AAG
-recovered pasa_asmbl_37424.p1, terminal, 11264, 11355
-recovered pasa_asmbl_37424.p1, internal, 10709, 10859
-recovered pasa_asmbl_37424.p1, internal, 11023, 11080
Couldn't classify 54963, 55085
Couldn't classify 56692, 56847
Sorry, prediction pasa_asmbl_37421.p1 fails validation.
(GAA)	 TG	54963-55085	GT	AGG
(CAA)	 AG	55287-55448	GT	AGG
(CTG)	 AG	56223-56336	GT	AGG
(ATT)	 AG	56692-56847	GT	GGG
-recovered pasa_asmbl_37421.p1, internal, 55287, 55448
-recovered pasa_asmbl_37421.p1, internal, 56223, 56336
-recovered pasa_asmbl_37421.p1, internal, 56692, 56847
Valid prediction for snap_scaffold_28-snap.720-T1
Valid prediction for Augustus_model.g39828.t1
Valid prediction for GlimmerHMM_glimmerT_59838-T1
Valid prediction for snap_scaffold_28-snap.722-T1
Valid prediction for snap_scaffold_28-snap.693-T1
Valid prediction for GeneMark_model.104371_t
Valid prediction for Augustus_model.g39831.t1
Valid prediction for snap_scaffold_28-snap.713-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 10258, rend_intergenic: 7322  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14559, rend_intergenic: 10293  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43235, rend_intergenic: 22536  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57714, rend_intergenic: 48040  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65455, rend_intergenic: 62363  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68140, rend_intergenic: 65596  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71700, rend_intergenic: 68373  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82217, rend_intergenic: 72130  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85951, rend_intergenic: 84290  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90432, rend_intergenic: 86287  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102850, rend_intergenic: 92671  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116467, rend_intergenic: 108565  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119850, rend_intergenic: 116654  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 132694
-exon list size: 719


building trellis

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29.1    
29.3    
29.4    
29.5    
29.7    
29.8    
30.0    
30.1    
30.2    
30.4    
30.5    
30.7    
30.8    
30.9    
31.1    
31.2    
31.3    
31.5    
31.6    
31.8    
31.9    
32.0    
32.2    
32.3    
32.5    
32.6    
32.7    
32.9    
33.0    
33.1    
33.3    
33.4    
33.6    
33.7    
33.8    
34.0    
34.1    
34.3    
34.4    
34.5    
34.7    
34.8    
35.0    
35.1    
35.2    
35.4    
35.5    
35.6    
35.8    
35.9    
36.1    
36.2    
36.3    
36.5    
36.6    
36.8    
36.9    
37.0    
37.2    
37.3    
37.4    
37.6    
37.7    
37.9    
38.0    
38.1    
38.3    
38.4    
38.6    
38.7    
38.8    
39.0    
39.1    
39.3    
39.4    
39.5    
39.7    
39.8    
39.9    
40.1    
40.2    
40.4    
40.5    
40.6    
40.8    
40.9    
41.1    
41.2    
41.3    
41.5    
41.6    
41.7    
41.9    
42.0    
42.2    
42.3    
42.4    
42.6    
42.7    
42.9    
43.0    
43.1    
43.3    
43.4    
43.6    
43.7    
43.8    
44.0    
44.1    
44.2    
44.4    
44.5    
44.7    
44.8    
44.9    
45.1    
45.2    
45.4    
45.5    
45.6    
45.8    
45.9    
46.0    
46.2    
46.3    
46.5    
46.6    
46.7    
46.9    
47.0    
47.2    
47.3    
47.4    
47.6    
47.7    
47.9    
48.0    
48.1    
48.3    
48.4    
48.5    
48.7    
48.8    
49.0    
49.1    
49.2    
49.4    
49.5    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.5    
50.6    
50.8    
50.9    
51.0    
51.2    
51.3    
51.5    
51.6    
51.7    
51.9    
52.0    
52.1    
52.3    
52.4    
52.6    
52.7    
52.8    
53.0    
53.1    
53.3    
53.4    
53.5    
53.7    
53.8    
54.0    
54.1    
54.2    
54.4    
54.5    
54.6    
54.8    
54.9    
55.1    
55.2    
55.3    
55.5    
55.6    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.6    
56.7    
56.9    
57.0    
57.1    
57.3    
57.4    
57.6    
57.7    
57.8    
58.0    
58.1    
58.3    
58.4    
58.5    
58.7    
58.8    
58.9    
59.1    
59.2    
59.4    
59.5    
59.6    
59.8    
59.9    
60.1    
60.2    
60.3    
60.5    
60.6    
60.7    
60.9    
61.0    
61.2    
61.3    
61.4    
61.6    
61.7    
61.9    
62.0    
62.1    
62.3    
62.4    
62.6    
62.7    
62.8    
63.0    
63.1    
63.2    
63.4    
63.5    
63.7    
63.8    
63.9    
64.1    
64.2    
64.4    
64.5    
64.6    
64.8    
64.9    
65.0    
65.2    
65.3    
65.5    
65.6    
65.7    
65.9    
66.0    
66.2    
66.3    
66.4    
66.6    
66.7    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.7    
67.8    
68.0    
68.1    
68.2    
68.4    
68.5    
68.7    
68.8    
68.9    
69.1    
69.2    
69.3    
69.5    
69.6    
69.8    
69.9    
70.0    
70.2    
70.3    
70.5    
70.6    
70.7    
70.9    
71.0    
71.2    
71.3    
71.4    
71.6    
71.7    
71.8    
72.0    
72.1    
72.3    
72.4    
72.5    
72.7    
72.8    
73.0    
73.1    
73.2    
73.4    
73.5    
73.6    
73.8    
73.9    
74.1    
74.2    
74.3    
74.5    
74.6    
74.8    
74.9    
75.0    
75.2    
75.3    
75.5    
75.6    
75.7    
75.9    
76.0    
76.1    
76.3    
76.4    
76.6    
76.7    
76.8    
77.0    
77.1    
77.3    
77.4    
77.5    
77.7    
77.8    
77.9    
78.1    
78.2    
78.4    
78.5    
78.6    
78.8    
78.9    
79.1    
79.2    
79.3    
79.5    
79.6    
79.8    
79.9    
80.0    
80.2    
80.3    
80.4    
80.6    
80.7    
80.9    
81.0    
81.1    
81.3    
81.4    
81.6    
81.7    
81.8    
82.0    
82.1    
82.2    
82.4    
82.5    
82.7    
82.8    
82.9    
83.1    
83.2    
83.4    
83.5    
83.6    
83.8    
83.9    
84.0    
84.2    
84.3    
84.5    
84.6    
84.7    
84.9    
85.0    
85.2    
85.3    
85.4    
85.6    
85.7    
85.9    
86.0    
86.1    
86.3    
86.4    
86.5    
86.7    
86.8    
87.0    
87.1    
87.2    
87.4    
87.5    
87.7    
87.8    
87.9    
88.1    
88.2    
88.3    
88.5    
88.6    
88.8    
88.9    
89.0    
89.2    
89.3    
89.5    
89.6    
89.7    
89.9    
90.0    
90.2    
90.3    
90.4    
90.6    
90.7    
90.8    
91.0    
91.1    
91.3    
91.4    
91.5    
91.7    
91.8    
92.0    
92.1    
92.2    
92.4    
92.5    
92.6    
92.8    
92.9    
93.1    
93.2    
93.3    
93.5    
93.6    
93.8    
93.9    
94.0    
94.2    
94.3    
94.5    
94.6    
94.7    
94.9    
95.0    
95.1    
95.3    
95.4    
95.6    
95.7    
95.8    
96.0    
96.1    
96.3    
96.4    
96.5    
96.7    
96.8    
96.9    
97.1    
97.2    
97.4    
97.5    
97.6    
97.8    
97.9    
98.1    
98.2    
98.3    
98.5    
98.6    
98.8    
98.9    
99.0    
99.2    
99.3    
99.4    
99.6    
99.7    
99.9    
-found 21 predictions from path traversal
Error with prediction: snap lend_intergenic: 10258, rend_intergenic: 7322  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 14559, rend_intergenic: 10293  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 43235, rend_intergenic: 22536  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 57714, rend_intergenic: 48040  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 65455, rend_intergenic: 62363  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 68140, rend_intergenic: 65596  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 71700, rend_intergenic: 68373  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82217, rend_intergenic: 72130  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 85951, rend_intergenic: 84290  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 90432, rend_intergenic: 86287  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 102850, rend_intergenic: 92671  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 116467, rend_intergenic: 108565  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 119850, rend_intergenic: 116654  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 13 predictions persist after filtering for low support