-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_28/scaffold_28_1386364-1586805

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Valid prediction for snap_scaffold_28-snap.340-T1
Valid prediction for GeneMark_model.103950_t
Valid prediction for Augustus_model.g39631.t1
Valid prediction for GeneMark_model.104005_t
Valid prediction for GeneMark_model.103978_t
Valid prediction for CodingQuarry_transcript_43443-T1
Valid prediction for GlimmerHMM_glimmerT_59536-T1
Valid prediction for GeneMark_model.103966_t
Valid prediction for GeneMark_model.104004_t
Valid prediction for snap_scaffold_28-snap.351-T1
Valid prediction for GlimmerHMM_glimmerT_59567-T1
Valid prediction for GeneMark_model.103952_t
Valid prediction for GeneMark_model.103987_t
Valid prediction for GlimmerHMM_glimmerT_59564-T1
Couldn't classify 194643, 194898
Couldn't classify 197109, 197173
Sorry, prediction pasa_asmbl_38007.p1 fails validation.
(CCG)	 CT	194643-194898	GT	AGG
(ACA)	 AG	195060-195257	GT	AGG
(AGT)	 AG	195418-195519	GT	TGG
(AGA)	 AG	195628-195726	GT	TGG
(CTC)	 AG	196112-196194	GT	AGG
(TAT)	 AG	196523-196623	GT	AGG
(AAA)	 AG	196820-196926	GT	GTG
(GCA)	 AG	197109-197173	AC	CCA
-recovered pasa_asmbl_38007.p1, internal, 195060, 195257
-recovered pasa_asmbl_38007.p1, internal, 195418, 195519
-recovered pasa_asmbl_38007.p1, internal, 195628, 195726
-recovered pasa_asmbl_38007.p1, internal, 196112, 196194
-recovered pasa_asmbl_38007.p1, internal, 196523, 196623
-recovered pasa_asmbl_38007.p1, internal, 196820, 196926
Valid prediction for CodingQuarry_transcript_43442-T1
Valid prediction for snap_scaffold_28-snap.331-T1
Valid prediction for Augustus_model.g39645.t1
Couldn't classify 193007, 193444
Couldn't classify 193733, 193885
Sorry, prediction pasa_asmbl_38006.p1 fails validation.
(CGC)	 CC	193007-193444	GT	AGG
(GAG)	 AG	193733-193885	AC	AGA
Valid prediction for snap_scaffold_28-snap.342-T1
Valid prediction for GeneMark_model.103997_t
Valid prediction for GeneMark_model.103960_t
Valid prediction for Augustus_model.g39641.t1
Valid prediction for GeneMark_model.103968_t
Valid prediction for snap_scaffold_28-snap.333-T1
Valid prediction for GlimmerHMM_glimmerT_59537-T1
Valid prediction for GeneMark_model.103970_t
Valid prediction for snap_scaffold_28-snap.363-T1
Valid prediction for GlimmerHMM_glimmerT_59566-T1
Valid prediction for GeneMark_model.103989_t
Valid prediction for GeneMark_model.103982_t
Valid prediction for GlimmerHMM_glimmerT_59560-T1
Valid prediction for GlimmerHMM_glimmerT_59555-T1
Couldn't classify 23887, 23988
Sorry, prediction pasa_asmbl_37999.p1 fails validation.
(TAC)	 GG	23887-23988	GT	AGG
(GAC)	 AG	24263-24382	GT	TGG
(CTG)	 AG	24988-25050	GT	GAG
(GTG)	 AG	26095-26397	AG	AGA
-recovered pasa_asmbl_37999.p1, terminal, 26095, 26397
-recovered pasa_asmbl_37999.p1, internal, 24263, 24382
-recovered pasa_asmbl_37999.p1, internal, 24988, 25050
Valid prediction for Augustus_model.g39644.t1
Valid prediction for GeneMark_model.103991_t
Valid prediction for snap_scaffold_28-snap.357-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_28-snap.325-T1
Valid prediction for snap_scaffold_28-snap.346-T1
Valid prediction for snap_scaffold_28-snap.335-T1
Valid prediction for GeneMark_model.103974_t
Valid prediction for GeneMark_model.103959_t
Valid prediction for GeneMark_model.104012_t
Valid prediction for GlimmerHMM_glimmerT_59556-T1
Valid prediction for GeneMark_model.103946_t
Valid prediction for GeneMark_model.103984_t
Valid prediction for GlimmerHMM_glimmerT_59545-T1
Valid prediction for Augustus_model.g39636.t1
Valid prediction for GlimmerHMM_glimmerT_59562-T1
Valid prediction for GeneMark_model.103999_t
Valid prediction for GeneMark_model.103994_t
Valid prediction for GeneMark_model.104008_t
Valid prediction for GeneMark_model.103980_t
Valid prediction for GlimmerHMM_glimmerT_59550-T1
Valid prediction for GeneMark_model.103992_t
Valid prediction for Augustus_model.g39620.t1
Valid prediction for GeneMark_model.103973_t
Valid prediction for snap_scaffold_28-snap.348-T1
Valid prediction for GeneMark_model.103956_t
Valid prediction for GeneMark_model.103948_t
Valid prediction for GlimmerHMM_glimmerT_59554-T1
Valid prediction for GlimmerHMM_glimmerT_59559-T1
Valid prediction for GlimmerHMM_glimmerT_59544-T1
Valid prediction for Augustus_model.g39642.t1
Valid prediction for snap_scaffold_28-snap.366-T1
Valid prediction for GeneMark_model.103971_t
Valid prediction for snap_scaffold_28-snap.362-T1
Valid prediction for GlimmerHMM_glimmerT_59561-T1
Valid prediction for snap_scaffold_28-snap.338-T1
Valid prediction for GeneMark_model.103962_t
Valid prediction for GeneMark_model.104000_t
Valid prediction for snap_scaffold_28-snap.350-T1
Valid prediction for pasa_asmbl_38004.p1
Valid prediction for GlimmerHMM_glimmerT_59548-T1
Valid prediction for GeneMark_model.103985_t
Valid prediction for GeneMark_model.103964_t
Valid prediction for GeneMark_model.104015_t
Valid prediction for snap_scaffold_28-snap.337-T1
Valid prediction for GlimmerHMM_glimmerT_59533-T1
Valid prediction for GeneMark_model.104002_t
Valid prediction for snap_scaffold_28-snap.365-T1
Valid prediction for GeneMark_model.104013_t
Valid prediction for GeneMark_model.103976_t
Valid prediction for snap_scaffold_28-snap.354-T1
Valid prediction for snap_scaffold_28-snap.353-T1
Valid prediction for snap_scaffold_28-snap.359-T1
Valid prediction for GlimmerHMM_glimmerT_59546-T1
Valid prediction for GlimmerHMM_glimmerT_59553-T1
Valid prediction for snap_scaffold_28-snap.330-T1
Valid prediction for Augustus_model.g39638.t1
Valid prediction for GeneMark_model.104011_t
Valid prediction for snap_scaffold_28-snap.324-T1
Valid prediction for snap_scaffold_28-snap.360-T1
Valid prediction for GeneMark_model.103996_t
Valid prediction for GeneMark_model.104009_t
Valid prediction for snap_scaffold_28-snap.344-T1
Valid prediction for GeneMark_model.103954_t
Valid prediction for GeneMark_model.103958_t
Valid prediction for GlimmerHMM_glimmerT_59551-T1
Valid prediction for Augustus_model.g39625.t1
Valid prediction for snap_scaffold_28-snap.321-T1

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)Valid prediction for snap_scaffold_28-snap.343-T1
Valid prediction for GeneMark_model.104007_t
Valid prediction for Augustus_model.g39640.t1
Valid prediction for GlimmerHMM_glimmerT_59549-T1
Valid prediction for GlimmerHMM_glimmerT_59541-T1
Valid prediction for Augustus_model.g39629.t1
Valid prediction for GeneMark_model.103979_t
Valid prediction for GeneMark_model.103953_t
Valid prediction for snap_scaffold_28-snap.364-T1
Valid prediction for GeneMark_model.103967_t
Valid prediction for Augustus_model.g39637.t1
Valid prediction for GlimmerHMM_glimmerT_59538-T1
Valid prediction for Augustus_model.g39624.t1
Valid prediction for GeneMark_model.103949_t
Valid prediction for GlimmerHMM_glimmerT_59534-T1
Valid prediction for GlimmerHMM_glimmerT_59535-T1
Valid prediction for snap_scaffold_28-snap.339-T1
Valid prediction for snap_scaffold_28-snap.332-T1
Valid prediction for GeneMark_model.104006_t
Valid prediction for snap_scaffold_28-snap.327-T1
Valid prediction for GeneMark_model.103993_t
Valid prediction for GlimmerHMM_glimmerT_59540-T1
Valid prediction for snap_scaffold_28-snap.355-T1
Valid prediction for GlimmerHMM_glimmerT_59558-T1
Valid prediction for Augustus_model.g39623.t1
Valid prediction for GeneMark_model.103945_t
Valid prediction for snap_scaffold_28-snap.361-T1
Valid prediction for Augustus_model.g39626.t1
Valid prediction for GeneMark_model.103983_t
Valid prediction for snap_scaffold_28-snap.326-T1
Valid prediction for snap_scaffold_28-snap.345-T1
Valid prediction for Augustus_model.g39633.t1
Valid prediction for GeneMark_model.103957_t
Valid prediction for snap_scaffold_28-snap.347-T1
Valid prediction for Augustus_model.g39635.t1
Valid prediction for GlimmerHMM_glimmerT_59547-T1
Valid prediction for GeneMark_model.103986_t
Couldn't classify 130657, 130782
Couldn't classify 133664, 133734
Sorry, prediction pasa_asmbl_37315.p1 fails validation.
(TCC)	 GC	130657-130782	GT	AGG
(TCA)	 AG	131287-131458	GT	AGG
(GCC)	 AG	133664-133734	GG	AAG
-recovered pasa_asmbl_37315.p1, internal, 131287, 131458
Valid prediction for snap_scaffold_28-snap.334-T1
Valid prediction for GeneMark_model.103965_t
Valid prediction for GeneMark_model.103990_t
Valid prediction for GeneMark_model.103988_t
Couldn't classify 113525, 113950
Sorry, prediction pasa_asmbl_37316.p1 fails validation.
(GCC)	 AC	113525-113950	CG	ACC
Valid prediction for GlimmerHMM_glimmerT_59539-T1
Valid prediction for GeneMark_model.103975_t
Valid prediction for snap_scaffold_28-snap.358-T1
Valid prediction for GeneMark_model.103998_t
Valid prediction for GlimmerHMM_glimmerT_59563-T1
Valid prediction for GeneMark_model.103981_t
Valid prediction for Augustus_model.g39621.t1
Valid prediction for snap_scaffold_28-snap.341-T1
Valid prediction for GlimmerHMM_glimmerT_59543-T1
Valid prediction for GeneMark_model.103963_t
Valid prediction for GeneMark_model.104003_t
Valid prediction for Augustus_model.g39639.t1
Valid prediction for snap_scaffold_28-snap.367-T1
Valid prediction for snap_scaffold_28-snap.356-T1
Valid prediction for GeneMark_model.103977_t
Valid prediction for GeneMark_model.103995_t
Valid prediction for GeneMark_model.103969_t
Valid prediction for GeneMark_model.103951_t
Valid prediction for GeneMark_model.103955_t
Valid prediction for GeneMark_model.104010_t
Couldn't classify 159144, 159222
Couldn't classify 161682, 161738
Sorry, prediction pasa_asmbl_37311.p1 fails validation.
(AAC)	 AC	159144-159222	GT	AGG
(GGA)	 AG	159542-159607	GT	AGG
(CTG)	 AG	159770-159826	GT	AGG
(GCA)	 AG	159969-160113	GT	TGG
(GTC)	 AG	160742-160816	GT	AAG
(GAA)	 AG	161428-161506	GT	AGG
(ACG)	 AG	161682-161738	AC	CCA
-recovered pasa_asmbl_37311.p1, internal, 159542, 159607
-recovered pasa_asmbl_37311.p1, internal, 159770, 159826
-recovered pasa_asmbl_37311.p1, internal, 159969, 160113
-recovered pasa_asmbl_37311.p1, internal, 160742, 160816
-recovered pasa_asmbl_37311.p1, internal, 161428, 161506
Couldn't classify 147736, 147855
Sorry, prediction pasa_asmbl_37312.p1 fails validation.
(CTG)	 AG	147736-147855	GT	CCG
(TGG)	 AG	149260-149410	GT	CGG
(GAA)	 AG	149570-149762	GT	AGG
(CCA)	 AG	151010-151121	GT	AGG
(CCC)	 AG	151301-151388	GT	AGG
(ATG)	 AG	152585-152676	GT	AGG
(GAT)	 AG	155120-155125	TC	AAT
add_exon() Sorry, pasa_asmbl_37312.p1 152585-152676-initial-1 is invalid.
-recovered pasa_asmbl_37312.p1, initial, 152585, 152676
-recovered pasa_asmbl_37312.p1, terminal, 155120, 155125
-recovered pasa_asmbl_37312.p1, internal, 147736, 147855
-recovered pasa_asmbl_37312.p1, internal, 149260, 149410
-recovered pasa_asmbl_37312.p1, internal, 149570, 149762
-recovered pasa_asmbl_37312.p1, internal, 151010, 151121
-recovered pasa_asmbl_37312.p1, internal, 151301, 151388
-recovered pasa_asmbl_37312.p1, internal, 152585, 152676
Valid prediction for Augustus_model.g39630.t1
Valid prediction for Augustus_model.g39627.t1
Valid prediction for GeneMark_model.103947_t
Valid prediction for snap_scaffold_28-snap.320-T1
Valid prediction for Augustus_model.g39622.t1
Valid prediction for Augustus_model.g39619.t1
Valid prediction for GeneMark_model.104014_t
Valid prediction for Augustus_model.g39643.t1
Valid prediction for Augustus_model.g39632.t1
Valid prediction for snap_scaffold_28-snap.349-T1
Valid prediction for Augustus_model.g39634.t1
Valid prediction for snap_scaffold_28-snap.329-T1
Valid prediction for GlimmerHMM_glimmerT_59565-T1
Valid prediction for snap_scaffold_28-snap.352-T1
Valid prediction for GeneMark_model.104001_t
Valid prediction for Augustus_model.g39628.t1
Valid prediction for GlimmerHMM_glimmerT_59552-T1
Valid prediction for snap_scaffold_28-snap.328-T1
Valid prediction for snap_scaffold_28-snap.323-T1
Sorry, intron length (4) is less than minimum required (10)
Valid prediction for snap_scaffold_28-snap.336-T1
Valid prediction for snap_scaffold_28-snap.322-T1
Valid prediction for GlimmerHMM_glimmerT_59557-T1
Valid prediction for GlimmerHMM_glimmerT_59542-T1

-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)Error with prediction: snap lend_intergenic: 26397, rend_intergenic: 13496  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40378, rend_intergenic: 30340  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62187, rend_intergenic: 58745  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67960, rend_intergenic: 66529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76403, rend_intergenic: 70180  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77897, rend_intergenic: 76766  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82013, rend_intergenic: 79372  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91688, rend_intergenic: 82732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100046, rend_intergenic: 92016  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105883, rend_intergenic: 101647  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106958, rend_intergenic: 106729  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114392, rend_intergenic: 112477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117782, rend_intergenic: 115024  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 121422, rend_intergenic: 119033  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 126431, rend_intergenic: 122113  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140868, rend_intergenic: 137964  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146674, rend_intergenic: 142420  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157667, rend_intergenic: 150362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 197942, rend_intergenic: 194429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 30140, rend_intergenic: 30137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-building DP trellis

-building trellis in range 1 - 200442
-exon list size: 899


building trellis

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41.8    
42.0    
42.1    
42.2    
42.3    
42.4    
42.5    
42.6    
42.7    
42.8    
43.0    
43.1    
43.2    
43.3    
43.4    
43.5    
43.6    
43.7    
43.8    
44.0    
44.1    
44.2    
44.3    
44.4    
44.5    
44.6    
44.7    
44.8    
45.0    
45.1    
45.2    
45.3    
45.4    
45.5    
45.6    
45.7    
45.8    
45.9    
46.1    
46.2    
46.3    
46.4    
46.5    
46.6    
46.7    
46.8    
46.9    
47.1    
47.2    
47.3    
47.4    
47.5    
47.6    
47.7    
47.8    
47.9    
48.1    
48.2    
48.3    
48.4    
48.5    
48.6    
48.7    
48.8    
48.9    
49.1    
49.2    
49.3    
49.4    
49.5    
49.6    
49.7    
49.8    
49.9    
50.1    
50.2    
50.3    
50.4    
50.5    
50.6    
50.7    
50.8    
50.9    
51.1    
51.2    
51.3    
51.4    
51.5    
51.6    
51.7    
51.8    
51.9    
52.1    
52.2    
52.3    
52.4    
52.5    
52.6    
52.7    
52.8    
52.9    
53.1    
53.2    
53.3    
53.4    
53.5    
53.6    
53.7    
53.8    
53.9    
54.1    
54.2    
54.3    
54.4    
54.5    
54.6    
54.7    
54.8    
54.9    
55.0    
55.2    
55.3    
55.4    
55.5    
55.6    
55.7    
55.8    
55.9    
56.0    
56.2    
56.3    
56.4    
56.5    
56.6    
56.7    
56.8    
56.9    
57.0    
57.2    
57.3    
57.4    
57.5    
57.6    
57.7    
57.8    
57.9    
58.0    
58.2    
58.3    
58.4    
58.5    
58.6    
58.7    
58.8    
58.9    
59.0    
59.2    
59.3    
59.4    
59.5    
59.6    
59.7    
59.8    
59.9    
60.0    
60.2    
60.3    
60.4    
60.5    
60.6    
60.7    
60.8    
60.9    
61.0    
61.2    
61.3    
61.4    
61.5    
61.6    
61.7    
61.8    
61.9    
62.0    
62.2    
62.3    
62.4    
62.5    
62.6    
62.7    
62.8    
62.9    
63.0    
63.2    
63.3    
63.4    
63.5    
63.6    
63.7    
63.8    
63.9    
64.0    
64.2    
64.3    
64.4    
64.5    
64.6    
64.7    
64.8    
64.9    
65.0    
65.1    
65.3    
65.4    
65.5    
65.6    
65.7    
65.8    
65.9    
66.0    
66.1    
66.3    
66.4    
66.5    
66.6    
66.7    
66.8    
66.9    
67.0    
67.1    
67.3    
67.4    
67.5    
67.6    
67.7    
67.8    
67.9    
68.0    
68.1    
68.3    
68.4    
68.5    
68.6    
68.7    
68.8    
68.9    
69.0    
69.1    
69.3    
69.4    
69.5    
69.6    
69.7    
69.8    
69.9    
70.0    
70.1    
70.3    
70.4    
70.5    
70.6    
70.7    
70.8    
70.9    
71.0    
71.1    
71.3    
71.4    
71.5    
71.6    
71.7    
71.8    
71.9    
72.0    
72.1    
72.3    
72.4    
72.5    
72.6    
72.7    
72.8    
72.9    
73.0    
73.1    
73.3    
73.4    
73.5    
73.6    
73.7    
73.8    
73.9    
74.0    
74.1    
74.3    
74.4    
74.5    
74.6    
74.7    
74.8    
74.9    
75.0    
75.1    
75.2    
75.4    
75.5    
75.6    
75.7    
75.8    
75.9    
76.0    
76.1    
76.2    
76.4    
76.5    
76.6    
76.7    
76.8    
76.9    
77.0    
77.1    
77.2    
77.4    
77.5    
77.6    
77.7    
77.8    
77.9    
78.0    
78.1    
78.2    
78.4    
78.5    
78.6    
78.7    
78.8    
78.9    
79.0    
79.1    
79.2    
79.4    
79.5    
79.6    
79.7    
79.8    
79.9    
80.0    
80.1    
80.2    
80.4    
80.5    
80.6    
80.7    
80.8    
80.9    
81.0    
81.1    
81.2    
81.4    
81.5    
81.6    
81.7    
81.8    
81.9    
82.0    
82.1    
82.2    
82.4    
82.5    
82.6    
82.7    
82.8    
82.9    
83.0    
83.1    
83.2    
83.4    
83.5    
83.6    
83.7    
83.8    
83.9    
84.0    
84.1    
84.2    
84.4    
84.5    
84.6    
84.7    
84.8    
84.9    
85.0    
85.1    
85.2    
85.3    
85.5    
85.6    
85.7    
85.8    
85.9    
86.0    
86.1    
86.2    
86.3    
86.5    
86.6    
86.7    
86.8    
86.9    
87.0    
87.1    
87.2    
87.3    
87.5    
87.6    
87.7    
87.8    
87.9    
88.0    
88.1    
88.2    
88.3    
88.5    
88.6    
88.7    
88.8    
88.9    
89.0    
89.1    
89.2    
89.3    
89.5    
89.6    
89.7    
89.8    
89.9    
90.0    
90.1    
90.2    
90.3    
90.5    
90.6    
90.7    
90.8    
90.9    
91.0    
91.1    
91.2    
91.3    
91.5    
91.6    
91.7    
91.8    
91.9    
92.0    
92.1    
92.2    
92.3    
92.5    
92.6    
92.7    
92.8    
92.9    
93.0    
93.1    
93.2    
93.3    
93.5    
93.6    
93.7    
93.8    
93.9    
94.0    
94.1    
94.2    
94.3    
94.5    
94.6    
94.7    
94.8    
94.9    
95.0    
95.1    
95.2    
95.3    
95.4    
95.6    
95.7    
95.8    
95.9    
96.0    
96.1    
96.2    
96.3    
96.4    
96.6    
96.7    
96.8    
96.9    
97.0    
97.1    
97.2    
97.3    
97.4    
97.6    
97.7    
97.8    
97.9    
98.0    
98.1    
98.2    
98.3    
98.4    
98.6    
98.7    
98.8    
98.9    
99.0    
99.1    
99.2    
99.3    
99.4    
99.6    
99.7    
99.8    
99.9    
-found 48 predictions from path traversal
Error with prediction: snap lend_intergenic: 26397, rend_intergenic: 13496  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 40378, rend_intergenic: 30340  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 62187, rend_intergenic: 58745  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 67960, rend_intergenic: 66529  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 76403, rend_intergenic: 70180  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 77897, rend_intergenic: 76766  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 82013, rend_intergenic: 79372  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 91688, rend_intergenic: 82732  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 100046, rend_intergenic: 92016  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 105883, rend_intergenic: 101647  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 106958, rend_intergenic: 106729  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 114392, rend_intergenic: 112477  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 117782, rend_intergenic: 115024  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 121422, rend_intergenic: 119033  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 126431, rend_intergenic: 122113  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 140868, rend_intergenic: 137964  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 146674, rend_intergenic: 142420  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 157667, rend_intergenic: 150362  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: snap lend_intergenic: 197942, rend_intergenic: 194429  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.
Error with prediction: GlimmerHMM lend_intergenic: 30140, rend_intergenic: 30137  at /venv/opt/evidencemodeler-1.1.1/evidence_modeler.pl line 3218.

-reporting highest scoring path thru the trellis.
-found 21 predictions persist after filtering for low support