-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2751

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 202, 335
Couldn't classify 1051, 1122
Sorry, prediction snap_scaffold_2751-snap.1-T1 fails validation.
(TGC)	 AG	202-335	GT	CAG
(GGC)	 AG	1051-1122	GT	GGG
-recovered snap_scaffold_2751-snap.1-T1, internal, 202, 335
-recovered snap_scaffold_2751-snap.1-T1, internal, 1051, 1122
Couldn't classify 156, 335
Couldn't classify 956, 1099
Sorry, prediction GeneMark_model.110566_t fails validation.
(TGT)	 AG	156-335	GT	CAG
(CAA)	 AG	956-1099	GT	GGG
-recovered GeneMark_model.110566_t, internal, 156, 335
-recovered GeneMark_model.110566_t, internal, 956, 1099

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1128
-exon list size: 7


building trellis

11.1    
22.2    
33.3    
44.4    
55.6    
66.7    
77.8    
88.9    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support