-successfully changed directories to /suikou/files/m256y/yoshitake.kazutoshi/work/pp-dev/yoshitake/test/annotation~Funannotate/fun/predict_misc/EVM/scaffold_2741

-reading genomic sequence.

** Processing features (+)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: +)
-loading gene prediction evidence. (strand: +)Couldn't classify 96, 203
Couldn't classify 669, 815
Sorry, prediction snap_scaffold_2741-snap.1-T1 fails validation.
(CCA)	 AG	96-203	GT	AGG
(CAT)	 AG	669-815	GT	AGG
add_exon() Sorry, snap_scaffold_2741-snap.1-T1 96-203-terminal-1 is invalid.
-recovered snap_scaffold_2741-snap.1-T1, terminal, 96, 203
-recovered snap_scaffold_2741-snap.1-T1, internal, 96, 203
-recovered snap_scaffold_2741-snap.1-T1, internal, 669, 815
Valid prediction for GlimmerHMM_glimmerT_63200-T1
add_exon() Sorry, GlimmerHMM_glimmerT_63200-T1 669-916-terminal-1 is invalid.

-loading the search evidence (protein and EST search results, strand: +)
-scoring exons (strand: +)

** Processing features (-)

-finding all potential splice sites, looking for GT/GC donors and AG acceptors.
-finding all potential starts and stops. (strand: -)
-loading gene prediction evidence. (strand: -)
-loading the search evidence (protein and EST search results, strand: -)
-scoring exons (strand: -)
-building DP trellis

-building trellis in range 1 - 1131
-exon list size: 3


building trellis

20.0    
40.0    
60.0    
80.0    
-found 1 predictions from path traversal
GOT 5prime partial gene.

-reporting highest scoring path thru the trellis.
-found 0 predictions persist after filtering for low support